Puntigrus tetrazona (Sumatra barb): 122360142
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Entry
122360142 CDS
T08985
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122360142 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122360142 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122360142 (usp5)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122360142 (usp5)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122360142 (usp5)
Ubiquitin system [BR:
ptet04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122360142 (usp5)
Exosome [BR:
ptet04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122360142 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_4
Pox_RNA_pol
Motif
Other DBs
NCBI-GeneID:
122360142
NCBI-ProteinID:
XP_043116436
LinkDB
All DBs
Position
16:13771941..13781207
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AA seq
853 aa
AA seq
DB search
MTEVSEILMSVLSTIRVPRPGDRVHKDECAFSFASPESEGGLYVCMNSFLGFGSKYVERH
HAKTGQKAYLHITRTRKTQKEDENNSGSGDPPKKKPTRLAIGIEGGFDVEQEQYEEEVKV
VLFPDRQEVTSEDLASMPDVVRERVSLSMAGLQAADSVSHTLQVQQWDGEVRQESKHAAE
LKQLDNGLKIPPSGWKCEVCDLQENLWMNLTDGKVLCGRRYFDGSGGNNHALLHYQQTGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLRPLWGPGLTGMKNLGNSCYLNSVMQVLFTIPDFQTKYVSNIDKIF
NEAPSDPTQDFKTQVAKLGYGLLSGEYSKPAPDPGDDPSTSAELRGDQVGIAPRMFKALV
GRGHPEFSTNRQQDAQEFLLHFINMVERNCRSGMNPSEAFRFLVEEKIVCQQSQKAKYTQ
RVDYIVQLPVPMDQATNMEELQEAERRREEAESSGAPPPAAPRAQIPFAACLAALSEPET
LTDFWSSAVQAKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSA
LRATGQQPGEELLPEVAPPPLMTPDVEVKGILGSHGNEEDDSLYSPLLSPVLDDSTVSQL
CEMGFPLEACRKAVYYTGNTGIDAAMNWVMGHMEDPDFSAPLVLPGSSSAPGTTPTESLP
EEHLATIVSMGFSRDQATRALRATNNVLERAVDWIFSHLDDLESMDVSEGGRSEGGSEAS
REPPPGPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPK
DLGYLYFYRRVVE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggttagcgagatattgatgtcggttctgtctacgattcgggttccgaggccc
ggagatcgtgttcacaaagacgagtgcgccttctcgttcgccagcccggagagtgaggga
ggcttgtatgtctgcatgaacagctttctcggctttggaagcaagtatgtagaaagacac
cacgccaaaaccggtcagaaagcttacctgcacatcacccggacccggaaaacacagaag
gaggatgaaaacaattctggatcaggtgaccctccgaaaaagaagcccacaagactagcc
atcgggattgagggagggtttgacgtggagcaggagcagtatgaggaagaggtcaaagta
gttctgttcccagaccgacaggaagtgacatcggaggatctagcatcaatgccagatgtt
gttcgggaacgggtgtccctgtcgatggcggggctgcaggcggcggactcagtgtcacac
actctgcaggtgcagcagtgggacggagaagtgcgacaggagtcaaaacacgcagctgag
cttaaacaactcgacaatgggctcaaaatccctccgagtggctggaagtgtgaggtctgt
gacctacaggagaacctgtggatgaatctgacagacgggaaggttttgtgtgggaggaga
tatttcgatggctcaggggggaataaccatgccctccttcactaccagcagactggatac
ccattggctgtcaaactcggcacaataacacccgacggagcagatgtctattcatatgat
gaagatgatatggtattagactctaagcttccagaacacctttctcactttggcatcgat
atgatgactatggaaaagacggaaagaaccatgactgagctggagattgcagtgaaccag
cgtgtgggagagtgggaggtgattcaggagtcaggtaccactctgaggcccctgtggggc
ccgggcctcaccggtatgaagaacctgggaaacagctgctacctcaactctgtcatgcaa
gtgctcttcaccatcccagacttccagaccaaatatgtttccaacatcgacaaaatcttc
aatgaggcacccagtgaccctacccaggattttaagactcaagtagcaaagctgggctat
ggccttctgtcgggagagtactctaagccggcccctgaccccggagatgaccccagtacc
tccgctgaactcaggggtgaccaggttggcatagcacctcgcatgttcaaagctctggtt
ggacgaggccaccctgagttctctaccaatcggcagcaggatgcacaggagtttcttctt
cactttataaatatggtggagaggaactgtcggtctggcatgaatccctcagaagctttc
cgcttcctggtggaggagaagatcgtatgtcagcagtcacaaaaggccaaatatacccag
cgagtggactacatagtccagctgcccgttcccatggaccaggcaactaatatggaggag
ctacaagaagcagagcgtcgccgggaggaggcggagtcatctggagcccctccccctgcc
gcacctcgtgctcaaatcccatttgctgcctgtctggctgctcttagcgaaccggaaaca
ctcacagatttctggagctctgcggtgcaagccaaaaccactgccacaaagaccactcgc
tttgcttcatttcctgaccatcttgtcatccaaattaagaaatttactttcggcctggat
tgggttcctaaaaaactagacgtgagcattgatgttcctgacacgctggatctgagcgcg
ctccgtgccacaggacaacagccaggggaggagcttctgcccgaggtggctccacctcct
ctcatgacccctgatgtggaggttaaaggtatcctgggttcccacggcaacgaggaggac
gactctctctactccccactgctgtctccagtgttagacgactccacagtgtctcagctg
tgtgagatgggttttcctctggaggcctgccggaaagccgtgtactacacaggcaacact
ggcattgatgctgctatgaactgggtgatgggacacatggaagaccctgatttctcagca
cctttagtgttgcctggatctagttctgctcctggcaccacacccacagagagtctacct
gaggagcatctagcaaccatcgtttctatgggattcagtcgagaccaggccactcgcgcg
ctcagagctacgaacaatgttctggagcgagctgtggactggatcttctctcatctggat
gatctggagtctatggatgtgtctgaaggtggacgctcagagggaggaagtgaagccagt
cgggaacctcctccaggaccacgtgtccgtgacggaccaggaaagtatgagctttttgca
ttcatcagtcacatgggaacgagcacaatgtgtggtcattacgtctgccacatcaagaag
gaccaacagtgggtcatctttaatgatcagaaagtttgtgcctctgagaaaccacctaag
gacctgggctacctgtacttttaccgaagagtggtggaatag
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