Puntigrus tetrazona (Sumatra barb): 122360154
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Entry
122360154 CDS
T08985
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122360154 (rnf115a)
04121 Ubiquitin system [BR:
ptet04121
]
122360154 (rnf115a)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122360154 (rnf115a)
Membrane trafficking [BR:
ptet04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122360154 (rnf115a)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122360154 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4
Zn_ribbon_19
zf-RING_5
zf-ANAPC11
zf-Nse
zf-C3HC4_3
zf-RING_16
C1_2
zf-RING-like
HypA
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
122360154
NCBI-ProteinID:
XP_043116454
LinkDB
All DBs
Position
16:13048819..13056074
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AA seq
310 aa
AA seq
DB search
MAEAAAVPPHRFFCHCCKGEVSPKLPEYICPRCDSGFIEEVTEDSSLLDSSSNNLDDTAS
QFAELWQLLFVERPFSLDLDSPDSERVPGGGGGSGSLGTGPFGGSVPGGLGGSLGGPLGA
GEHWGPGRPPRLHTQRRYRSRGSSRPDRSPAVEGIVQQFLAGLFANSGVPGSPPLSWTGM
LHSNPGDYAWGQGGLDAVITQLLGQFENTGPPPAEKEKISSLPTVIITQEHTDCNMECPV
CKEDYTVGEPVRQLPCNHIFHSDCIVPWLELHDTCPVCRKSLSGDESGTQSSSEPSSLNT
DPRTPERWSF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcggcggtccctccgcatcgcttcttctgtcactgttgtaagggtgaa
gtgagccccaaactgccggagtatatctgtcccagatgcgactcgggcttcatcgaggag
gtcacagaagactccagtcttctggacagtagttcaaataaccttgatgacacagcttca
cagtttgccgagctatggcagctgttgttcgtggagaggcctttcagtttggatctagac
agtcctgattctgagcgggtcccgggagggggcggcgggtcggggagtctgggaacgggg
ccgttcggcggttctgtccctggtgggcttggtgggtccctgggcggccctctaggagcg
ggagagcactggggtcctggtcgtcctccacgcctgcacacgcagaggaggtaccgatcc
agaggaagcagtcgaccggatcgctctcccgctgttgagggaattgtacagcagtttctc
gcaggcctttttgccaattcaggagtaccaggctctcctccactgtcatggacgggcatg
ctacactcaaaccctggggactacgcctggggacaggggggtctggatgcagtcatcaca
cagttattgggtcagtttgagaacacgggtcctcctcctgctgagaaagagaaaatatcc
tccctccccactgttatcatcactcaggaacacaccgactgcaatatggagtgccctgta
tgtaaggaagactatacggtcggtgagccggtcaggcagctgccctgtaaccacatcttc
catagtgactgcatcgtgccctggcttgaactgcacgacacgtgtcctgtgtgcaggaag
agcctcagtggagatgaaagcggcactcagtcctcatcagagccttcctccctaaacact
gatcctcgcacaccggagagatggtccttctga
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