Puntigrus tetrazona (Sumatra barb): 122360231
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Entry
122360231 CDS
T08985
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122360231 (mib1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122360231 (mib1)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122360231 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
Ank_4
MIB_HERC2
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Prok-RING_4
Sina_RING
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122360231
NCBI-ProteinID:
XP_043116585
LinkDB
All DBs
Position
16:complement(8005718..8053185)
Genome browser
AA seq
1041 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSAASPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGTFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGEVAAGAEGGSSQFMVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPAGSAVTNASGAVLTESPS
MPTERLSQLLKKLFETQESGDINEELVKAAANGDLAKVEDILKRPDVDVNGQCAGHTAMQ
AASQNGHVDVLKLLLKHNVDLEAEDKDGDRAVHHAAFGDEGSVIEVLHRGGADLNARNKR
RQTPLHIAVNKGHLQVVKTLLDFGCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADV
TITNNNGFNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAE
LLVHQGNANLDIQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRH
HTLSQLRQLQDMQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRN
KKGQSPLDLCPDPSLCKALAKCHKEKTSGQVGSRSPSLNSNNETLEECMVCSDMKRDTLF
GPCGHIATCSLCSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCA
SLMKKCVQCRAVVERRTPFVLCCGGKGMEDATDDEDLTGGSNSMAGGSQDLLQPNNLALS
WSSGNIPALQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCLDRLKNMIFMCGHGTCQLC
GDRMSECPICRKAIERRILLY
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggtaggaataacagagtcatgatggaaggagttggtgctcgagttatccgc
gggcctgactggaagtggggtaaacaggacggtggagaagggcacgtcggcaccgtcagg
agttttgaaagcccggaggaagtggtggtggtgtgggataacggcaccgccgcaaattac
cgctgctccggagcttatgatgtgaggattttagacagtgctcccacaggaatcaagcat
gatggcaccatgtgtgacacctgtcggcagcagcccatcattgggatccgatggaaatgt
gcggagtgcaccaactacgacctctgcaccacctgttaccatggtgataagcaccacctg
cgccacaggttctaccgtatcaccactcccggaagtgagagggttcttttggaatctcga
cgcaagtcaaagaagatcaccgcccggggcatctttgcaggaggacgggtggtgcgggga
gtggattggcagtgggaagatcaggatggcgggaatggaagaagagggaaggtgacggag
atccaggactggagtgctgccagcccccacagcgcagcctacgtcctctgggacaatggg
gccaagaacctctaccgagtgggattcgagggcatgtctgatttgaagtgtgtgcaagat
gccaaaggaggcactttttacagagaccactgtccagtgttgggtgagcagaatggaaac
aggaacccaggagggctgcagattggagacttggtcaacatcgatttggacctggagatc
gttcagtcgctgcaacatggtcacggaggctggactgatggcatgtttgaaacgctcacc
accacaggcaccgtctgcggcattgatgaagaccatgacattgtcgtgcagtatcccagt
ggaaacaggtggacatttaacccagcggtgctcacaaaggcaaacgttgtacgtagtgga
gaggtggcggctggtgctgagggaggcagttctcagttcatggtgggagacttggtccag
atctgctatgacattgaccgcatcaaactactccagagaggacatggagagtgggctgaa
gctatgctgccaacccttgggaaggtgggaagagtgcaacagatttattctgacagtgac
ctcaaagtcgaggtttgtgggacatcctggacatacaatccagcggctgtcactaaagtt
gctcctgctggatctgctgttactaacgcttctggagcagtgttgacagagagtccttct
atgcctacagagcgcctgtctcagctcctcaagaagctttttgagacgcaggagtctgga
gacattaatgaagagctggtgaaggccgcggccaatggtgacctagccaaagtagaggac
atcctgaagagacccgatgtggacgtgaacgggcagtgtgcaggacacactgccatgcag
gcagccagccagaatggtcatgtggacgtcctcaaactgctgctgaaacataatgtggac
ctggaggctgaggataaggatggagaccgcgctgtccatcacgcagccttcggggacgaa
ggttctgtcatcgaggtgctgcatcgaggtggggctgacctgaatgccagaaacaaacgc
agacagacgcctctgcacatcgctgtcaacaagggccacctacaggtggtgaagactttg
ctcgactttggctgccaccccagtctgcaggactcagagggagacacgcctctgcatgat
gccatcagcaagaagagggatgacatgctctctgtgctcctggaagcgggcgcagatgtc
acaatcaccaacaacaacggattcaacgcacttcatcacgcagctctgcgagggaacccc
agtgccatgcgtgtgctgctatctaaactgccacgaccatggatagtagatgagaaaaag
gatgatggttacaccgctcttcacctggctgccctcaacaaccacgtggaggtagcagag
ctcctagtccaccagggaaatgccaatttggacatacagaatgttaaccagcagacggca
ctgcaccttgctgtagaacgtcagcacacacagatagtgcgacttctggtgagagctgag
gcaaagttggacgtgcaagacaaggacggagacacgccactgcacgaggctctgcgtcac
cacactctgtcccagctgcgccaacttcaggacatgcaggacgtcagcaaagtggagccc
tgggagccctccaaaaacacattaattatgggactgggcactcaaggtgcggagaagaag
agtgcagcttctattgcttgcttcctagcggccaatggagctgacctcaccattcgtaac
aagaagggccagtctcctctggacctgtgccccgaccccagcctctgcaaggcccttgct
aaatgccacaaagaaaagactagtgggcaggttggctcccgtagcccgtctctaaacagt
aataatgagactctcgaggaatgcatggtgtgctcggatatgaaaagagacacgcttttt
ggcccctgcggtcatatcgctacctgctctctctgctcgcctcgtgtcaaaaaatgtctc
atttgtaaggaacaggtccagtccagaaccaagattgaggagtgtgtggtttgctctgat
aaaaaggcagcagtgcttttccaaccctgtggtcacatgtgcgcctgtgagaactgtgcc
agcctgatgaaaaagtgtgtacagtgtcgggccgtggtggagcgccgcactcccttcgtt
ttgtgctgtggagggaaaggtatggaggatgccactgatgatgaggaccttacagggggc
tctaactcaatggcaggggggtcgcaggatcttctccagcccaacaatctggcactaagt
tggtccagcggaaatatcccagccttgcagagggacaaagacaacactaatgtcaatgca
gatgtacagaagttgcagcagcagctgcaggatatcaaagagcagaccatgtgccccgtg
tgtttggatcgcctaaagaatatgatcttcatgtgcggtcatggcacttgtcagctctgc
ggagacagaatgagcgagtgccccatctgccgcaaggccatcgagcgtcgcatcctactt
tactag
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