Puntigrus tetrazona (Sumatra barb): 122360299
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Entry
122360299 CDS
T08985
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122360299 (lingo4b)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122360299 (lingo4b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
LRR_Zer-1
LRRNT
V-set
LRR_EndoS
LRR_6
Ig_2
C2-set_2
C2-set_3
Motif
Other DBs
NCBI-GeneID:
122360299
NCBI-ProteinID:
XP_043116723
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Position
16:complement(17765567..17776359)
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AA seq
604 aa
AA seq
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MFMDLCGRRGAWTVLLLWCINLSVADLTCPQKCTCYPDTLEVNCSSRHLTSVPEGLPNYG
KRLDLSRNQLKTLARRQFSSLSKLEDLDLSENIISMIEVETFQGLKNLRYLRIKNNRLKI
LPVGVFSGLSNLRRLDISENEILVFLDYTFRDMINLQQLDAGENDLVFISQRAFVGLQAL
KEMNVDRSNLTSIPTEALSQLQSLTKLRLRKLTISVLPNNAFRRLHQLRTLQILHWPSLE
TLNSNSLVGLNLTTLILSSCNLSAVPYAALRPLTYLQYLDLSYNPITSIQGNLLGEILRL
QELHLVGGNLLRIEPGAFRGLVHLRLLNVSSNRLSTIEESVFHSVGNLQTLRLDRNPLAC
DCRLLWVMRRRRRLDFDGRQPTCSPLNQHKKAFRDFSEADLPVIFTCRQAQILNRQQQDV
SVVEGMSVRFDCKADGYPSPSIIWLSAQQTALSSVGRVRVLANGSLEVRYTQVQDSGTYL
CTAFNAAGNDSISVSLQVEGLPQNRTASYFSDEGWMETSLPPSTNSSARVSSPYPFDAKT
LIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDGGDTGRFT
MKLI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggatctgtgtggccggcggggcgcatggacagtcctgttgttgtggtgcata
aatctatcagttgcagacctcacctgcccgcagaaatgcacatgttaccctgacactttg
gaggtcaactgctcctcaagacacctaacgagtgtgcctgagggcttaccaaactatggc
aaacgcttagatctttcaagaaaccagctgaaaacgctggccaggcgtcagttctccagc
ctgtcaaagctggaggacctggacctaagtgagaacataatctctatgatcgaggtggaa
acatttcaggggctgaagaacctgagatacttgaggattaagaacaaccggctcaagatc
ctcccagttggagtcttttctggtctctccaaccttcgacgtctggatatcagtgagaat
gagatcctggtttttctggattacacatttcgggacatgattaatctacagcagcttgat
gcaggagaaaatgacctggtgtttatctcgcaacgggcatttgttgggcttcaggcgctg
aaggagatgaatgtggaccgcagcaatttaacctccatccccaccgaggctctgtcgcaa
cttcagagcttgaccaagctacgtctgcgtaagttgaccataagcgtcctgcccaacaat
gccttccgccgactgcaccagctgcgtaccttgcagatcctccactggccttctcttgag
acgctaaatagcaacagcttggtaggcctcaaccttaccaccctaatattaagcagctgc
aacctcagcgctgtaccttatgctgcgctgcgtccactcacctacctgcagtaccttgac
ttgtcctacaaccccatcacctccatacagggcaaccttcttggggagattctgcggctc
caagagttacacctagttggtgggaacctactgcgtattgagccgggtgccttcaggggt
ctggtccaccttcgtctgctcaatgtgtcctcgaatcgtctgtccacaatagaagaaagc
gtcttccactctgtagggaatttgcagaccctgaggctggacagaaacccattggcttgc
gactgtaggttactctgggtcatgcgaaggcggcggcgcctggatttcgatggccgccaa
cctacctgctcgcctctaaatcagcacaagaaggcatttcgtgacttttcagaggctgat
ctcccggttatatttacttgcagacaagcgcagattctaaatcggcagcagcaggatgtg
agtgtagtggagggcatgagtgtacggtttgactgcaaagcagacggctatccatcacct
tctattatttggctgtcagcccagcagactgcacttagctctgtcgggagagtacgagtg
cttgctaatgggagcttggaggtgcgttacacccaagtacaggacagtggaacatatcta
tgtactgcatttaatgcagcaggcaacgacagcatctccgtgagtctgcaagtggagggg
cttccacaaaaccgcacagcgtcatatttctcagacgaggggtggatggaaacttcatta
cccccttctaccaactcctccgcacgggtgtcaagtccttacccatttgatgcgaaaacc
ctcatcattgctaccaccatgggatttctctctttcctcagctctgtggcgatctgtttt
gtgtttatgttcttctggagtcagagcaaaggtcagattaaacacactgccactatagac
tttgtgccacgatcttccatgggtggaggtggagatggtggggacactgggagattcaca
atgaagctgatttga
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