Puntigrus tetrazona (Sumatra barb): 122360306
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Entry
122360306 CDS
T08985
Symbol
trip13
Name
(RefSeq) LOW QUALITY PROTEIN: pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122360306 (trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122360306 (trip13)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
122360306 (trip13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_16
AAA_22
nSTAND3
AAA_24
AAA_14
AAA_18
Viral_helicase1
AAA_25
KAP_NTPase
TIP49
TsaE
AAA_28
NACHT
NPHP3_N
RNA_helicase
AAA_7
AAA_5
AAA_33
AAA_11
ATPase_2
ATPase
AAA_30
Cytidylate_kin
bpMoxR
RuvB_N
SLFN-g3_helicase
ABC_tran
AAA_17
DUF815
AAA_19
Rad17
Mg_chelatase
NTPase_1
NB-ARC
IstB_IS21
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
122360306
NCBI-ProteinID:
XP_043116737
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Position
16:27257980..27265824
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AA seq
424 aa
AA seq
DB search
MDISEHHMTDVGLIRPDVHIEVHIKSQSTAKRPEVRTRVLSLLDRHSTVLSSYRWTEFDD
EFLTKNVESVTVADLIGPKLVDLKAHNLCIHVFSLNDESPSTLALEEEEELSAANHWLLP
AAEFHGVWESLIYEEGIKTQLLDYVSTTIFFSDRNVDSNLIAWNRVVLLHGPPGTGKTSL
CKGLAQKLSIRLSGRYAHSQFVEINSHSLFSKWFSESGKLVTKMFQKIQELIDDKDALVF
VLIDEVESLTAARSAAQAGTEPSDAIRVVNSVLTQLDQIKRYPNVVILTTSNVTEKIDLA
FVDRADIKQYIGPPSASAVFNIYLSCLEELMKRQIVYPRQQLLSLEELGTVNFMESDVTR
LSLTLRNLARRSVGLSGRALRRIPFLAHALYGKSSSVTVEAFLRAMERAVDKQRQEQASL
VNCV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggacatatctgagcatcacatgaccgatgtcggcctgatccgccccgatgtgcacata
gaggttcacatcaagtctcagagcacggccaagaggcctgaggtgaggacgcgtgtgctg
tcactgctggaccgacacagcaccgtcttaagctcctacagatggacagagtttgacgac
gagtttctaaccaaaaatgtggagtcggtcacagtagcggatttaattggtccaaaactc
gttgatttaaaggctcacaacctttgtatccatgttttctctctgaacgatgaaagtccg
agcacgcttgctctggaagaggaggaggagctttctgctgccaatcattggctcctacca
gcagctgagtttcatggcgtttgggaaagcttgatttatgaggaaggcatcaaaacacaa
ctcttggattatgtttcgacaacgatcttcttctctgacagaaacgtcgacagcaatttg
attgcctggaatcgggtcgtgttgcttcacgggccgcctggcacgggcaagacgtctctg
tgcaaaggacttgcccagaaactctccatcaggctgtctggcaggtacgcgcacagccag
ttcgtggagatcaacagccacagcctcttctccaagtggttctcagagagcggaaagctg
gtcacgaagatgtttcagaagattcaggagctcattgatgataaagacgccctggtgttc
gtcctgatagatgaggtggagagtctcacagccgcccggagcgccgctcaagcaggaacg
gagccgtccgacgccattcgggtggtcaactccgtgctcacccagctcgaccagatcaaa
cggtacccaaacgtcgtcatcctcaccacatccaacgtcacggaaaagatcgatctggcg
tttgtggaccgagccgatataaagcagtacatcggccccccgagcgccagcgccgtgttc
aacatctacctgtcctgtctggaggagctcatgaagcgccagatcgtctaccccaggcag
cagctgctgagcttggaggagctgggcaccgtgaacttcatggagagcgacgtgacccgt
ctgagcttaaccctgaggaacctcgcccggaggagcgtgggactcagcggacgggccttg
aggagaatcccgtttctggctcacgcgctctatggaaagtcctcctcggtgacagtggag
gcttttctgagagcgatggagcgggccgtggacaaacagaggcaggaacaggcgagtttg
gtcaactgtgtttga
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