Puntigrus tetrazona (Sumatra barb): 122360359
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Entry
122360359 CDS
T08985
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122360359 (ascc3)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122360359 (ascc3)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
122360359 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
122360359
NCBI-ProteinID:
XP_043116826
LinkDB
All DBs
Position
16:complement(2915655..3064578)
Genome browser
AA seq
2207 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQDDLTQDIYDLKSKRLKRQEIFGRGGLTWQKIVQFFTQHLEK
KDQPAATLELKNILQAAKQIVGTDYGQDTIESAGVFLFKTFHNKDQIGHEETRAIKQMFG
PFPASAAELSCAAVGRLVAQIGESQVDAFIQTQSSLKTVNHTSIFGRNIAFSFDTYVLDA
QDTLPWSEGTDMEQDVDFHSFLNNHVGERRAGGDRDDACSAEELERRNPDSSILRQEVEK
YLKEGNMVSSSAEELSTSLFEMLASTKSDDELQNELFEFLGPQGFEMISKLLQSRSDIVD
SLVSIPLDSRPHFTSGKLKGMRDESTKPTYGCQVTIQSEQEKQMMKIYRKEEKKERKREK
RGDEGDTYESAFHFDPKELRLQREQALLTARSSPVFGRHRDYERIRYPHVYDSYAEAIKT
SAFVGGSKMLLPEGIRRENNKMYEEVEIPPNEPMPIGFEEKPVYISELDEIGQLVFKGMK
RLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTILHEIRQHLQPGGVIRKDQFKIV
YVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRK
SVGDVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNY
LDVASFLHVNPFIGLFYFDGRFRPVPLGQSFVGIKTTNKVQQLHDMEEVCYEKVLKQIRA
GHQVMVFVHARNSTVRTAMSLIEMAKNRGELSFFQVDQGPDYGQCEKQVQRSRNKQVREM
FPDGFGIHHAGMLRQDRTLMENMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTNIYDAK
RGALVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFQQSL
ADNLNAEIALGTVTNVDEAVRWLSYTYLYVRMRANPLAHGISHKAYQMDLLLELYRKELV
VESGRKLDKARMIRFDERTGYFASTDLGRTASHFYIKYNTIETFNELFNAQKTEADILSI
VSKAEEFEQIKVRDEELEELEKMLCNFCELPATGGVENGYGKINILLQTYIGRGEVDSFS
LISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGWAHPLRQFSALP
PSVLSRMEERNLTVDKLRDMGKDEIGHMLHHVNIGLKVKQCVHQIPAILMESSVQPITRT
VLRVRLSITPDFRWNDQVHGSVGEPWWLWVEDPINDHIYHSEYFLLHKKQVVSGEPQQVV
FTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPVTALG
NREYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAEMAIFRVFNKYPTSK
VVYIAPLKALVRERIEDWKIRIEEKLGRKVVELTGDVTPDMRAIAQADLIVTTPEKWDGV
SRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKQVRIVGLSTALA
NARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRTHSP
AKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDEREMNDIIGTIRESNLKLTLAF
GIGMHHAGLHDRDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYFDGKTRR
YVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLSVLSDH
LNAEIAAGTVTSKQDSMDYITWTYFFRRLVMNPSYYNLDDINHETINKYLSNLVERSLRD
LECSYCMEIQEDEHTIEPLTYGRIASYYYLKHQTIRMFRERLQPELPIQELLAILSEAEE
YAELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYATDTK
TVLDNAIRICQAMLDVVANEGWLVSALSICNLVQMIVQARWLHDSSLLTLPHVQKQDLYV
FRRWSAKGARGGGGHRGPIEGLLELMAACDGKETDFTSMAKEALQPSQISQAWAFLSHLP
VVELKMSVKGWWEGREEQTERSLPAGVGDIRDESSWLPLHADQEYVLQVSLRRLNAGQHR
RKQDSKAQAPRFPKPKDEGWFLVLGEVEKKELLAVKRVGFVRNRSSASVAFYTPERTGKC
IYTLYLMSDSYLGLDQQYDIHLNVVSASVAAQVNSEISDSVGKMPLK
NT seq
6624 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctcctcggctcaccggagccctgcgctccttttctactgtcagcaaacaggat
gatttaacacaagacatttatgatctcaagagcaaacgcctgaaacgacaggaaatattt
ggcagaggtggtttgacatggcagaagatagttcagttcttcacccaacatctggagaag
aaagatcaaccggcagccactcttgagttgaagaatatcctccaagcagccaaacagatc
gttggaacggattatgggcaggacaccattgaaagtgccggagtcttcttgtttaaaaca
ttccacaacaaagaccagatcggtcacgaggaaaccagggccataaaacagatgtttgga
ccctttccggcgtctgcagccgagttgtcttgtgcagctgttggtcgtttagtggcccag
attggagaatctcaggtggatgctttcatccaaacacagagttctctcaagacggtgaac
catacttctatctttggacggaacattgctttctcatttgacacatatgtgctggatgct
caagatactctgccctggtcagaggggactgatatggagcaggacgtggactttcacagc
tttctcaataatcatgttggtgagcggagagcaggaggtgacagagatgatgcttgctcc
gcagaagagctagagcggagaaacccagacagctccatcctgagacaagaggtggagaaa
tacctgaaagagggaaatatggtatcatccagtgccgaagagctctccacctctcttttt
gagatgcttgcttccacaaaaagcgatgacgaactacaaaacgagctgtttgagtttcta
ggtcctcagggatttgagatgatctccaaactcctccagagtaggtcagacattgtggat
tccctggtgtccatcccgttggatagcagacctcacttcacttcaggaaagctcaaaggg
atgagggatgaatccaccaagcccacatacggctgccaggtgaccatccagtccgaacag
gagaagcagatgatgaagatttacaggaaagaagagaagaaggagaggaagcgtgagaaa
cgaggagatgaaggggatacctatgaaagcgcttttcatttcgaccccaaggagctgaga
ctgcagagggaacaggccttgctgactgcacgcagttctccggtgtttggccggcacaga
gattacgaacgcatccggtaccctcacgtctacgattcttacgccgaagccatcaagacc
tcagcattcgtcggtggatccaagatgctgctgcccgaggggatcagaagagagaataat
aagatgtatgaggaggttgagatcccccccaacgagcccatgcccattggcttcgaggag
aaacctgtgtacatctcggagctggacgagatcggccagttggtgtttaagggcatgaag
aggttgaacagaattcagtctatcgtgttcgagacggcttacaacaccaatgaaaacctg
ctcatctgcgcccccaccggtgccggcaaaaccaacatcgccatgctcaccatcctgcac
gagattcgccaacacctgcagcctgggggagtcatccgcaaggatcagtttaagattgta
tacgtggctccgatgaaggccctggctgctgagatgactaattacttcagtaagcgattg
gagcctttgggcatcgctgtcaaggagctgacgggagacatgcagctgaccaaaggagaa
atcctccgcactcagatgttggtgacgactccagagaagtgggatgtggtgaccaggaag
agtgtgggggacgtggctttgtctcagatcgtccgactgctcatcctggatgaagttcat
cttcttcatgaggatagaggacctgttctggagagccttgtggcccggacgttacgtcag
gtggagtccacccagagcatgattcgcatacttggtctctcagcgactctgccaaattac
ttggatgtggcgtctttcctgcacgtgaaccctttcattggattgttctactttgacggc
cgttttcgtcctgttccacttggccagagcttcgttggcatcaagactacaaataaggtc
cagcagctgcacgacatggaggaggtttgttatgagaaagtcctgaagcagatcagagcg
ggtcaccaggtgatggtgttcgtacatgcccgcaactccaccgtccgcaccgccatgagt
ctgatcgagatggccaagaaccgaggagagctgtccttcttccaagtcgaccagggtccg
gactacggccagtgtgagaaacaggtgcagcgctccagaaacaagcaggtgagggagatg
tttccggacgggttcggtatccatcacgccggaatgctacgacaggaccgcacgctcatg
gagaacatgttttccagagggtacttaaaggttctagtgtgcaccgccacgctggcctgg
ggtgttaacctacccgctcacgcggtcatcatcaagggcactaacatctacgatgccaag
cgtggtgcgcttgtggacctgggcatcctagacgtgatgcagatcttcggtcgagctgga
cggccgcagttcgataagtacggtgaaggaaccatcatcacgacccacgacaagctgagc
cattacctgactctcctgactcagcagaaccccatcgagagccagttccagcagagtctc
gccgacaacctcaacgctgagatcgctctagggacggtcactaatgttgatgaagccgtc
cggtggctgagttacacgtacctgtacgtgcgaatgagagccaatccactcgctcacggg
atcagtcacaaggcctatcagatggacctgctgttggagctctacaggaaggagttagtc
gtggagtccggaaggaagctggataaggcgcggatgatccgttttgacgagaggactggt
tattttgcatccacggacctcggcaggacggccagccacttctacataaagtacaacacc
attgagacattcaatgagctgttcaatgcacagaagaccgaggcagatattctgagcatt
gtttcaaaagctgaagagtttgagcagatcaaggttcgtgacgaggagctggaggagctg
gagaagatgttgtgtaatttctgcgagctgccggcgaccggaggagtggagaacggctac
ggcaagataaacatcctcctccagacgtacatcggccgcggggaggtggacagcttctcc
ctcatatctgacctctcctatgtagcgcagaatgctgctcgtatcgtgcgggctctgttt
gagatcgctctgaggaagcgctggccggccatgacctaccgtctgctaaacctgtgtaaa
gtgatagacaagcgtctgtggggctgggcccacccgctgcgacagttcagcgcgctgccc
ccttcggtgctgtccagaatggaggagaggaacctcacggtggacaaactcagggacatg
ggcaaagatgagatcggtcacatgttgcatcacgtgaacatcgggctgaaggtgaagcag
tgtgttcatcagatccccgccatcctgatggagtccagcgttcaaccaatcacacgcact
gtcctgcgcgttcgcctcagcatcaccccagacttcaggtggaatgaccaggtccatggc
tcagtgggagagccctggtggttatgggtggaggatcccatcaacgaccacatctaccac
tctgagtacttcctcctgcataagaaacaggttgtgagtggtgagccccagcaggtcgtc
ttcactatacccatctttgagcccatgccttctcagtattacatccgagccgtgtctgac
cgctggctgggttctgaagctgtgtgtatcatcaacttccagcatctcatcctgcctgaa
agacacccgccacacactgagctcttggatcttcaaccgctgcctgtgactgcgttggga
aaccgggagtatgagagtctatacaagttcacgcactttaatcccattcagacgcagatc
ttccacacactctaccatacagacaccaacgtcctgctgggggcccccaccggttccggc
aaaaccatcgctgcagagatggccatcttcagggtcttcaacaagtaccccacctccaag
gtggtctacattgctcctctcaaagcactggtccgagagaggattgaagactggaagatc
agaatagaagagaaacttgggaggaaggtggtcgagttaacaggcgacgttactccagac
atgcgagccatcgctcaggccgacctgatcgtcaccactccagagaaatgggacggagtc
agccgcagctggcagaaccgcagctatgtgcagaaagtagctattctcatcatagacgag
atccatcttctaggtgaggacagagggccggttttagaggtcattgtgtccagaaccaac
tttatctcatctcacacctcaaaacaagtgcgaatcgtgggactgtctaccgctctggct
aatgcacgggatctagccgactggttaggcatcggacaggtgggactgtttaatttccgg
ccctccgttcgcccagtgccgttggaggttcacatccagggctttccggggcagcattat
tgccctcgtatggccagcatgaacaaacctgtcttccaagcaatccgcacacattctcct
gccaagccggtcctcatatttgtgtcatcgcgccggcaaacgcggctcacggctctggac
ctcattgcgtttctggctacagaagacgaccccaagcagtggctccaccaggacgagaga
gagatgaacgatatcatcggcactataagagagtccaatctgaagctgaccctggcgttc
gggatcgggatgcatcacgcggggcttcacgacagagacaggaagacggtggaggagctc
ttcgtcaactgtaagatccaggtgttaatagccaccagcacactagcgtggggcgtcaac
ttccccgctcacctggtgatcgtgaagggcacagaatatttcgacggaaagactcgccgc
tacgttgattaccccataacagatgttcttcagatgatgggccgagcaggacgaccgcag
ttcgatgatcagggcaaggctgttatccttgtgcacgacatcaagaaggacttctataag
aagttcttgtacgagccgttccctgtggagtctagtctcctgagcgtgctctccgaccac
ttgaacgcagaaatcgcagcgggcacggtcacctcaaaacaagactccatggattacatc
acctggacgtacttcttccgcaggctggtcatgaaccccagttactataatttggatgac
atcaaccatgaaaccattaacaaatacctttcaaacctggtggagaggagtctgagggat
ctggaatgttcctactgcatggaaatacaggaggacgagcacaccatcgagccgttgacg
tacggtcgcatcgcatcctactattacctgaaacaccagaccatccgcatgttcagagag
cgtctgcagccagagctgcccatccaagagctgctggccatcctgtcggaagcagaggag
tacgccgaactccccgtccgtcacaacgaggaccagctgaacagcgagctggcccagagg
ctccccctgcaggtcaaccctcactcgtacgacagcgcgcacaccaaaacacacctgctc
ttgcaggcccacttctcccgggcgcagctgccctgcagcgactacgcaaccgacaccaaa
acagtgctggacaacgccatccgcatctgccaggctatgctggacgtggtggcgaatgaa
ggatggctcgtgtctgcgctgagcatttgcaaccttgtacagatgatcgttcaggccaga
tggcttcacgattcctcccttctcacacttcctcacgtccaaaagcaggatctctatgtc
ttcaggaggtggagcgctaaaggtgcgaggggcggaggtggccatcgaggcccaatcgag
gggcttctcgagctaatggccgcctgcgacgggaaagagaccgacttcacgtcgatggcg
aaggaggcgctgcagcccagtcagatctctcaggcgtgggcttttctgagtcaccttccc
gtggtggagctgaagatgagcgtgaagggctggtgggagggccgcgaggagcaaaccgag
cgctcgctcccagccggcgtcggcgacatcagagacgagtccagctggctgccgctgcac
gccgaccaggagtacgtcctccaggtgtccctgcgccgcctcaacgccggccagcacaga
aggaagcaggacagcaaggcgcaggccccgcgcttccccaaacccaaagacgaaggctgg
tttctcgttctcggcgaggtggagaagaaagaactgctggccgtcaaacgcgtggggttc
gtacgcaaccgcagcagcgcgtccgtggccttctacacgcccgagaggacgggaaagtgc
atctacacgctgtacctgatgagcgacagctacctcggtctggatcagcagtacgacatc
cacctgaacgtcgtctcggccagcgtcgctgcgcaggtcaacagcgagatatcggacagc
gttggcaagatgccactgaagtga
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integrated database retrieval system
