Puntigrus tetrazona (Sumatra barb): 122360441
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Entry
122360441 CDS
T08985
Symbol
cdkal1
Name
(RefSeq) LOW QUALITY PROTEIN: threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122360441 (cdkal1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
122360441 (cdkal1)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
122360441 (cdkal1)
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
122360441
NCBI-ProteinID:
XP_043116990
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Position
16:complement(7441898..7618596)
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AA seq
564 aa
AA seq
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MPSACDSLVDDIEDMVTSQDPTPYERQFARRNIVPRPRKHKPQSAGEELQTDSVIPGTQK
IWVKTWGCSHNSSDGEYMAGQLAASGYKITENPSDADLWLLNSCTVKNPAEDHFRNSIKK
AREQNKKVVVAGCVPQAQPRTDYLKELSIIGVQQIDRVVEVVEEAVQGHSVRLLGQKKEK
GKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQGEVCEIWLTSEDTGAYGRDIGTDLPSLLWELVKEIPDGAMLRLGMTNPPYILEHLEEM
ARVLQHPRVYSFLHVPVQSASDSVLMDMKREYCCDDFRRVSDFLKERVPGITIATDIICG
FPGETEEDFEQTMELVRQYRFPSLFINQFYPRPGXSAAKMEQVPAHVKKQRTKELSALFH
SYNPYDHKIGERQRVLVTEESFDSQYYVAHNKFYEQVLVPKKPEFKGKMIEVDIYEAGKH
YMKGRLVEEAQVFTPSIAQPLLKGQVSGLPQEPKASHQNGVRASVVSPALVGRSWRFDSD
KLKLLSLGLALAAVIVALLIDKLH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccgtctgcttgtgactctctggtcgatgatatcgaggacatggtgacttctcaggac
cccactccttatgagcggcagtttgcccggagaaacattgtgcctcgtcctcgcaaacac
aagcctcagtctgcaggagaagagcttcagacagacagtgtgattcctggcacacagaag
atctgggtgaagacgtggggctgctcacacaacagctctgatggagagtatatggctgga
cagctggcagccagtggatataagatcacagagaatccatctgatgccgatctgtggttg
ctgaacagttgcacagtcaaaaacccagcagaagatcacttcaggaactctatcaagaaa
gcgcgggagcagaataagaaggtggttgtggcaggatgtgttccacaggcccagcccagg
accgactacctcaaggagctcagcatcattggggtccagcagatcgatcgagtggtggag
gtggtggaggaggctgttcagggtcactctgtgcgtctgctgggtcagaagaaggagaaa
ggcaagcgtctgggaggagcgaggctggatttgcccaagatcaggaagaacccgctgatt
gaaatcatttccatcaatactggctgtctgaacgcttgcacgtactgcaaaaccaaacat
gccagaggagatctggccagttaccccatcgaggaactggtggagagagcccggcagtcc
ttccagggtgaggtgtgtgagatctggctgaccagcgaggacacaggcgcgtacggcagg
gacatcggcacggacctgccctctctgctctgggagctggtgaaggagatcccggacgga
gcgatgctgcgcttgggcatgaccaacccaccctacatcctggaacacctggaggagatg
gcccgagtcctgcagcacccgcgggtctactccttcctccacgtgccggtgcagtcggcc
tctgacagcgtcctgatggacatgaagagagagtactgctgcgacgacttcagacgcgtc
tctgacttcctcaaggagagggttccaggcatcactattgccacggacatcatctgtggt
ttcccaggagagacggaggaggacttcgagcagacgatggagctcgtgaggcagtaccgc
tttcccagcctctttatcaaccagttctacccacgaccgggannctcagcggccaagatg
gagcaggtcccagctcacgtgaagaagcaaagaaccaaagagctttctgccctcttccac
tcctacaacccttacgaccacaagatcggcgagaggcagcgtgtgctggtcaccgaggag
tcctttgattcgcagtactacgtcgctcacaacaagttctacgagcaggtcctggtgccc
aagaagccagaatttaaagggaagatgatcgaggtggacatatacgaggctgggaagcac
tacatgaagggccggctggtggaggaggcgcaggtcttcactccgtccatcgctcagcct
cttctgaagggacaggtgtctggactccctcaggaaccgaaggcgtcccatcagaacggc
gtccgtgcttcggtggtttcgcctgcgctcgtgggacggtcctggaggtttgatagtgat
aaactcaagctgctgtcattgggacttgctctagctgctgtaatcgtggctcttttgatt
gacaagctccactga
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