Puntigrus tetrazona (Sumatra barb): 122360545
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Entry
122360545 CDS
T08985
Symbol
smpd5
Name
(RefSeq) sphingomyelin phosphodiesterase 5
KO
K12352
sphingomyelin phosphodiesterase 3 [EC:
3.1.4.12
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet00600
Sphingolipid metabolism
ptet01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122360545 (smpd5)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
122360545 (smpd5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
nSMase_N
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
122360545
NCBI-ProteinID:
XP_043117203
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Position
16:27498900..27509761
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AA seq
538 aa
AA seq
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MSLRASPFPNFFLEGLHAAGWALIFPCFWFLDRLLAVCVSTSLERMWRREMECYLHPLQV
VFGSVLFLALFVISTPFALLGLMLWAPLQAVRRPFAYHRQERIVPMEDRNARWEETGKVS
FGFLTGNLCLLPDGVARFNNLGHTQKRAAYIGKSIVQGVTRPHIRIFVDSPSSCGTVTPS
SSLIPQPPPPSYGSTAANRTEDVGETDALPKPNCNQNSNQSKNPPRTLFQDSPVEVSALF
PSSVDVVCLQEVFDKRAAVKLARALGPLYGHVLYDVGVYACQPAGTCSSFKFFNSGLFVA
SRFPVMEAEYRCFPNGRGEDALAAKGLLAVKVEIGLRKGEKKMVGYINCTHLHAPEGEGE
IRFEQLNMLTKWINEFQAVTRREDEMVMFDVLCGDFNFDNCSPDDRLEQSHGVFEDYMDP
CRAGAGREKPWVIGTLLEQPTLYDENVRSPDNLQRTLETEELRKNYLSPPVPVEGVPLVY
PEPDQPWTGRRIDYLLYRDSSVSSHGKTELEEFTYVTQLAGLTDHVPLAFRLSVSLDS
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaagagcgtctcctttccccaatttcttcctggaaggtctccacgccgcagga
tgggctctgatcttcccttgcttctggttcctggaccggctcctcgccgtctgcgtgtcc
accagcctggagcgcatgtggcggcgcgagatggagtgctacctccacccgctccaggtc
gtcttcggctccgtcctcttcctcgccctcttcgtgatctccacgccgttcgcgctgctg
gggttaatgctgtgggcgccgctgcaggccgtgcggaggccgttcgcgtaccaccgccaa
gagcggatcgttcccatggaggatcgcaacgctagatgggaagagaccgggaaggtcagc
ttcgggtttttgacgggaaacctgtgcttgcttcccgacggcgtcgcgcgcttcaacaac
ctcgggcacacgcagaaacgcgcggcgtacatcggcaaaagcatcgtccagggcgtcacc
cgccctcacatacgcattttcgtcgactcgcccagcagctgcggcaccgtgacgccctcc
agcagtttgatcccgcagcctccgccgccttcgtacggctccacggcggccaatcggacg
gaagacgttggcgaaaccgacgcccttcccaagcccaactgcaatcagaactccaaccag
agcaagaatccgcctcggacgctcttccaagactctccggtggaagtgtccgccctgttc
ccgtcctccgtggacgtcgtttgtctccaggaggttttcgacaagagagccgccgtcaag
ctcgcgcgggctctcgggccgctctacggacacgtgctctacgacgtcggcgtctacgcc
tgtcagcccgctgggacgtgctcgtcttttaagttttttaacagcggcttgttcgtggct
agccgctttcccgtgatggaggcggagtaccggtgctttcccaacggacggggagaagac
gcgctggctgccaaaggactgctcgccgtaaaggtggaaatcgggttacggaaaggcgag
aagaagatggtggggtatattaactgcactcacctgcacgctcctgaaggggagggagag
atccgcttcgagcagctcaacatgttgactaaatggatcaatgagttccaggcggtgacc
agacgagaagatgagatggtgatgttcgacgtgctctgtggagacttcaactttgacaac
tgctctcccgacgaccggctggagcagagccacggtgtgtttgaggactacatggacccc
tgcagagccggagccggccgagagaagccctgggtcatcggaactctgctggaacagccg
acgctgtacgacgagaacgtcaggagcccggacaacctccagcggactctggagaccgag
gagctgcgtaagaactatctgtctccaccggtgcccgtcgaaggcgttcctctggtctat
cctgagcctgaccagccctggacgggccgccggatcgattacctgctctacagagacagc
tctgtctccagccacggcaaaacggagctggaggagttcacgtacgtcacccagctggcc
ggactgaccgatcacgttcctctggccttcaggctctccgtctctctggactcgtga
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