Puntigrus tetrazona (Sumatra barb): 122360611
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Entry
122360611 CDS
T08985
Name
(RefSeq) endoribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122360611
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122360611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
RuvA_C
zf-CCCH_4
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
122360611
NCBI-ProteinID:
XP_043117318
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Position
16:4785107..4793964
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AA seq
584 aa
AA seq
DB search
MQSRCYHQPTGLGQDGPDLRDLQMKVDFFRKLGYSPQEVKAALRKLGLGTDTNAVLGELV
RSGAKAVPSSSSDSDDGVFSLPHRGGSSSRTQASALEDATEPESDLKPIVIDGSNVAMSH
GNKEVFSCRGIELAVNYFLDRGHRNITVFVPSWRKEQPRPDVPISDQRILEELERKKILV
FTPSRRVGGKRVVCYDDRFIVKLAHDLDGIIVSNDTYRDLQSERPEWKRCIEERLLMYSF
VNDKFMPPDDPLGRHGPNLDNFLRKKALLLDHKRQLCPYGKKCTYGIKCKFYHPERTNQS
QRSLADELRENARLSGSKEESRVNGPIRGMYPRNDPCFGSSSTSLEQELEQKLSLDLESS
DGREVMLQYWDDILSTKKLLNTTTVGQRSVSVDRTSLQTTYPKNPSSIFSSDSGLGSYES
QFSDPSQSIDELHRMRSSHPPMSGNLGVPAGGQHYYENMNPFSNYQPNFGAYSSLPLHNP
VQRYSLPAYGAWSYPYFLPQATSLPEPLTCPSSHRSPDVYGSQQHSAMPQSNAFQEEREE
VRKKLHAIFNPRHVNKVMEMFPQLKDAQQLAAQILKLKSSGEFF
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgaggtgttaccatcaacccaccggcctgggccaagacggacccgacctccgt
gacctgcagatgaaggtggacttctttcgtaagctgggatactctccgcaggaggtaaag
gcggccctgaggaagctcggcctggggacggacacaaacgcggtgctgggggagctggtg
cgctcaggggccaaggccgtgccctcctccagctctgacagtgatgatggtgtgttcagt
ttgccccatcggggtggaagttcatctaggacgcaggcttcagcgctggaggacgccact
gaaccagaaagtgacctgaagcctattgttattgatggaagcaacgtggccatgagtcat
gggaacaaggaagtgttttcctgccgtgggattgagctggcagttaattacttccttgac
cggggacacagaaatatcactgtgtttgtgccttcctggagaaaagagcagcccaggcct
gatgtacctatttcagatcagcgtattttggaagagctggaaaggaagaagattcttgtg
tttacaccttcacgaagggttggaggaaagcgtgtggtttgctatgatgatcgctttatt
gtcaaattagctcatgatctggatggcattatagtgtccaacgacacatatcgtgatctg
caaagtgaacgtccggagtggaagcgttgcattgaggagagattgcttatgtactccttt
gtcaacgacaaattcatgccacctgatgaccctctcggccgtcatggacccaatttggat
aattttcttcgtaaaaaagccttgttacttgatcacaagagacaactctgtccatatgga
aaaaagtgcacatatgggattaagtgtaagttctaccaccctgagcgcacaaaccagtca
cagcgttctctagccgatgagctcagagagaatgccagactgtctggctcaaaagaggaa
agcagagtaaatgggccaataagaggcatgtacccaaggaatgacccttgctttgggtcc
agctcaacctccttggagcaagaactggaacaaaagctcagcttggatctcgagagctct
gacggcagagaggttatgctccagtactgggatgacattttgtccaccaaaaagctttta
aatacaaccacagtgggacaacgcagtgtttcggtagacagaaccagcctgcaaacaact
tatccaaaaaacccttcatccattttcagttctgactcagggcttggatcctacgaaagc
cagttttcagatccgtcccagagcattgatgagttgcataggatgagatccagtcatcca
ccgatgtctggtaaccttggtgtacctgcaggtggccagcactactatgaaaacatgaat
cctttctccaactatcagcccaactttggtgcctacagctccctacctctgcacaaccct
gtccagcgttacagtcttcctgcttacggtgcctggtcttacccttacttcttaccacag
gcaaccagtttacctgaacctttaacctgtcctagctcgcacaggtctcctgatgtctat
ggaagccagcagcactcagccatgccacagtccaacgctttccaggaagaaagagaggag
gtcaggaagaagcttcatgcgatttttaacccgcgtcacgtaaacaaagttatggaaatg
ttcccgcagctgaaagatgcacagcagctggcagcacagattctcaaactcaagtccagc
ggagagtttttctaa
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