Puntigrus tetrazona (Sumatra barb): 122360666
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Entry
122360666 CDS
T08985
Symbol
snx27b
Name
(RefSeq) sorting nexin-27b isoform X1
KO
K17936
sorting nexin-27
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122360666 (snx27b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122360666 (snx27b)
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Others
Others
122360666 (snx27b)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122360666 (snx27b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
RA_2
SNX17-27-31_F1_FERM
SNX17_FERM_C
VirE3
USP7_C2
PDZ_2
SNX17-31_F2_FERM
Sina_TRAF
RA_3
DarA_N
Motif
Other DBs
NCBI-GeneID:
122360666
NCBI-ProteinID:
XP_043117406
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All DBs
Position
16:15188303..15204131
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AA seq
569 aa
AA seq
DB search
MADVVEGDCSRSAGPSALHSAARNGSSMSSGTCAGGLVATTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEGATHK
QVVDLIRAGEKELVLAVLSVPQPETDSLDPGDDGSSQSCYDYSDKQAVPISVPTYKHVEQ
NGEKFVVYNVYMAGRQLCSKRYREFAILHQNLKREFANFAFPKLPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTVTVRVRKNC
TTDQVYQAIVTKIGMDSITASYFALFEVINHSFARKLAPNEFPHKLYVQNYTSAIPGTCL
TLRKWLFTTEEEILLNDNELAINYCFHQALDDVKKGFIKAGEKSYQLQKLTEQRKMTMYL
SILRTCEGYNEITFPHCSCDSRRKGHVVTAISIRHFKLHACTEDGTLENQVIAFEWSEMQ
RWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKEVEEEATDKD
NKNCSKDEYLPTVETQKGWRHMNEEIISS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttgtcgaaggagactgtagtcgttccgctggcccttccgcgcttcattca
gcggctcgcaacggctccagcatgagctcgggaacgtgcgccggcggcctcgtcgcgacc
acggtcacctccgggcctcggctggtccgcatcgtcaagtcggactcaggctatggcttc
aatgtccgcgggcaagtaagcgaaggagggcagctcaggagcatcaacggtgaactttac
gccccgctgcagcacgtcagtgccgtgttaccgggcggcgcggcagaccgagccggaatc
tcaaagggcgaccgtattcttgaagtaaatggggtgaatgtggaaggggccactcataag
caggtggtagatctcatacgagctggagagaaagagttagtcttggctgtcctgtccgtt
cctcagccagagacggacagccttgatcctggggacgatggttcatcgcagtcctgctat
gactacagtgacaaacaggccgtgcctatctctgtacccacctacaaacatgtggaacag
aacggagagaagtttgtggtctacaatgtgtacatggcaggcaggcagttgtgctcgaag
cgttatcgggagtttgccatcttgcatcagaatctgaagagggaatttgccaactttgca
tttcccaagctgcctgggaaatggcctttctctctgtctgagcaacagctagacgctcgc
agacgagggttggaggaatacttggagaaagtgtgttctgttcgggtgatcggagagagc
gacatcatgcaggagtttctgtcggagtctgatgagaattataacggtgtttctgatgtg
gagctaaggatagccatgccagacaaaaccacagttaccgtccgagtgcgaaagaattgc
acaacagaccaggtctaccaggctattgtaacaaaaattgggatggacagcattactgcg
agttattttgccctgtttgaagtcattaaccactcttttgcacgcaagctggcccctaat
gagtttccacataagctatatgtacagaactatacgtctgccatcccaggcacctgcctc
acgcttcgcaagtggctcttcaccacagaagaagagattctgctcaatgataatgagctg
gccatcaactattgctttcatcaggctctggatgatgtgaaaaagggattcatcaaagcg
ggagagaaatcctaccagctccaaaagctcactgaacagaggaaaatgaccatgtattta
agtattctgaggacttgtgagggctacaatgagatcactttcccacattgctcctgtgac
tcgcgtaggaaaggtcacgtggtcactgcgataagcatccgccactttaaactccacgcg
tgcacagaggatggcactctagagaatcaggtgatagcttttgaatggtccgagatgcag
agatgggacacagatgaagagggaatggctttctgtttcgagtatgcacgaggggagaag
aaacctcgctgggtcaaaatcttcactccatatttcaactacatgcacgagtgtttcgag
agagtcttctgtgaactcaaatggagaaaagaggttgaagaggaggccacggacaaggac
aataagaactgcagtaaagatgaatatcttccaactgttgagacacagaagggatggagg
cacatgaacgaagagatcatctcctcttga
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