Puntigrus tetrazona (Sumatra barb): 122361022
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Entry
122361022 CDS
T08985
Name
(RefSeq) terminal nucleotidyltransferase 4A-like
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122361022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122361022
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122361022
Enzymes [BR:
ptet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122361022
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122361022
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122361022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
Polbeta
PAP_NTPase
TUTase
SDP_N
Motif
Other DBs
NCBI-GeneID:
122361022
NCBI-ProteinID:
XP_043117889
LinkDB
All DBs
Position
16:complement(10364421..10372271)
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AA seq
714 aa
AA seq
DB search
MDPRVAWIQPEQKGPANALWMRVWETSQRRNHCHSLRVNTPALTASFMKRFSQVPTNTAG
KTFNSYSNQPYNDSGAMRSPNACSDSAPPYVTPIRVNGSDPSSPLSSGDSESDSPTLDLS
SARGDSIGANPAKVRFNFTEHMHNVSNSLQQQYQRLQAQIIMDNQLKHSVRKTSDNKSST
YGMNYFLSHSNGSHLCVTPWATRRYSPGINGLHEEIVDFYHFMSPRPEEEEMRRNVVSRI
EAVIKDLWPMAKVEIFGSFSTGLYLPTSDIDLVVCGKWEQPPLQQLEQALRQNKVAEPFS
IKLLDKATVPIIKLTDRHTDVKVDISFNVETGVKAALFIKDHLRRYSVLPYLIFVLKQFL
LQRDLNEVFTGGISSYSLILMVISFLQLHPRIDCRASNINLGILLIEFFELYGRHFNYLK
TGIRVKDGGAYLAKEEIMKVLENRYRPSVLCIEDPNLPGNDVGRSSYGAFQVKEVFNYAY
LVLSHAVSPLSRSYPNRNMESTLGRIIKVTQEVIDYREWIIQQWGNRHNVRMFDRKIQNV
EDSEEQTSSEEQERDSSSPHSAGSPVSLSHLQQHSSASSSSSVSSFSGSDIDSDTPCKAS
VLQKFFPVSCMADNSKKPQRKVKSGTFLHSRSQSQPLPSKRCMDELTCVKGLVHVYPVYS
SSTPSPSHYTNGFEGPPQTGCLVHNTVPAPRGQQYGHNSLRRRRRETAPMSFSR
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcgggtagcttggattcagccagagcagaaaggacctgccaacgctttatgg
atgcgcgtatgggaaacctcgcaaaggcgaaaccactgtcactcactgcgggtaaataca
cctgcgttgacggccagttttatgaagcggttttcgcaggttcccaccaacaccgctgga
aagacttttaacagctactccaatcagccttataatgatagtggtgccatgaggtctcca
aacgcatgttctgactctgcacctccttatgtcacccctatcagagtcaacggtagtgat
ccttcgtcacctttatcttcaggtgattcagagagtgacagcccgacgttagatttatca
tcagccaggggtgacagtattggcgcaaatccagccaaagttcgctttaactttactgaa
catatgcacaatgtcagtaacagtttgcaacaacaatatcagcgactgcaagcacaaata
ataatggataaccaacttaagcattcagtgagaaagacaagcgacaataagtcgagcaca
tatggaatgaactactttttgtcccactctaacggcagtcatttatgtgtgaccccttgg
gcaactagaagatacagtccgggtattaacgggctccacgaggagatagtggatttttat
catttcatgtcacctcgtccagaagaggaagaaatgaggagaaatgttgttagccgtatt
gaggctgtaatcaaagatctgtggcctatggcaaaggttgaaatatttggcagctttagt
acaggactttaccttcctactagtgatattgacctggtggtgtgtggaaaatgggaacaa
ccacctctgcagcagctggaacaggcactcaggcagaataaagtggctgagcctttctcc
attaaactacttgataaggctacggtaccaataattaagctgactgacagacacacagat
gtgaaggtggacattagttttaatgttgaaactggtgtcaaagcagctctgtttattaag
gatcatcttaggcgatattctgtgctgccttacttgatctttgtactgaagcagtttctg
ctccagagagatttgaatgaggtgtttacgggcggtatcagttcctacagtctcatttta
atggtcatcagcttcctgcagctccatcccagaatagactgcagagcttcaaatatcaat
ttgggcatcctgctcattgaattctttgaattgtatgggcggcattttaattacctgaaa
acaggcattcgtgttaaagatggaggagcttatcttgctaaagaggagatcatgaaggtt
ttggaaaatagatatagaccgtcagtgctctgtattgaagacccaaatttgccaggaaat
gatgttggccggagttcttacggtgcctttcaggtgaaggaggtatttaactatgcatac
ctcgtcttgagtcatgctgtgtcaccactttcccgctcctaccccaatagaaatatggaa
agcacacttggacgcatcattaaagtgacccaggaagtgattgactacagggagtggatc
attcagcagtggggaaacagacacaatgtcaggatgtttgaccgtaaaattcagaatgtt
gaagactcagaggagcagacctcaagtgaggagcaggagagagattcctcatcaccacac
agtgcaggctcccctgtatcactgtcccaccttcagcagcactcttcagcttcctcatct
tcctctgtgtcttcgttttctgggagtgacatagattcagacacgccatgcaaagcttca
gttcttcagaagttctttccagtgtcctgcatggctgataacagtaagaaaccacagaga
aaagtgaaatctggaactttcctccactccagaagtcagtcgcaacctttacccagcaaa
cgatgtatggatgagttgacttgtgtgaagggattagtacacgtgtatcctgtttactcc
agctccacacccagccctagtcactacactaatggatttgaggggcctccacaaactggt
tgtttagtccataacactgtgcctgcccccagaggtcaacagtatgggcataacagtttg
cggcgccggcgaagagagactgctcccatgagtttcagcagatag
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