Puntigrus tetrazona (Sumatra barb): 122361023
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Entry
122361023 CDS
T08985
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122361023 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122361023 (prpf3)
Spliceosome [BR:
ptet03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122361023 (prpf3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
122361023
NCBI-ProteinID:
XP_043117890
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All DBs
Position
16:complement(10391834..10403036)
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AA seq
701 aa
AA seq
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MSLPKREVDELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAS
SFVERLFEALEESRNSRGNKGAGEKNRKRELKEVFGDEVEGVKDGGSVESVVKKKRVPRF
EEVEEPPVLPGPPTESPGMLTKMQIKQMMEAATRQIEERKKQLSLVAPVPVVPPRLVPSQ
TDSSAPHPILPTVGSTQSIAPSQAANFMNDAIEKARKAAELQAKIQSTLAMKPGILGTLG
NTGPHNLVALANLHAMGIAPPKVEPREITKPTPLILDELGRTVDASGKEVELTHRMPTLK
ANIRAVKREQFRQQLKEKPSDDLESTSYFDSRVAINSAQRAKRGFRFHEQGRFEKIAQRI
RTKAQLEKLQMEIAQAAKKTGIQASTKLALIAPKKELGEGEVPHIEWWDSYILPSHIELS
AHTHFDEVEMHGVTNLVEHPIQMAPPVDTDKPVTLGVYLTKKEQKKLRRQTRREAQKELQ
EKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLT
AEQRKEKKVKKLKEDLSHGVHIAVYRIRNLHNPAKKFKVEANANQLYLTGTVVLHKDVNI
VVVEGGPKSQKKFKRLMLSRIKWDEPNSKRDEPQDSDDEGSRKNNKCTLVWEGTATERSY
GEVKFKQCPTESMAREHFKKHGTEHYWDLALSQSVLETTDD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcccaaacgtgaggttgatgagctgaggccatgggtggaacgtacagtaaag
aaggtccttggtttttctgaacctactgtggtcacagcagcgttgcattgtgtaggaaaa
ggcctggacaaaagaaaaactacagaccaactaaggccgtttcttgatgattcagcaagc
agctttgttgagcgtctgtttgaagctcttgaggaaagcaggaactcccgtggcaacaaa
ggagcaggagagaagaaccgcaaaagagagctaaaggaagtgtttggagatgaggtggaa
ggggtgaaggatggaggcagtgtggaatctgtggtaaaaaagaagagggtacctcgcttt
gaggaggtggaggaaccacccgttttacctggaccccctacagagagtcctggcatgctt
actaaaatgcagattaagcaaatgatggaagcggctacgcggcagattgaggagagaaag
aaacagctaagtcttgtggctcctgtccctgtcgtgccgcctagattggttccctctcag
acagactctagtgctccacatcccatccttccaacagttggttcaacccaatccatcgct
ccctcccaagctgctaacttcatgaatgatgctatagagaaagcacgcaaggcagcagag
ctgcaggccaagatccagtccacactggctatgaaacctggaattctgggtactttggga
aacacagggccacataacctggtagccctggctaacctgcacgccatgggcattgcacca
ccaaaagtggaaccacgtgaaatcacaaagccaacgcccctcattttggatgagcttgga
cgaactgttgatgccagtgggaaagaagttgagctcacacatcgtatgcccactctaaaa
gccaacatcagagcggtgaagagggaacagtttcggcagcagttaaaggaaaagcccagt
gatgacctggaatccacgtcttactttgactcacgtgtggccatcaactctgcacagaga
gccaaaagagggtttcggttccatgaacagggacgctttgagaagattgcccagcgcata
cgaacaaaggctcagctagagaaactacagatggagattgctcaggctgccaagaagaca
ggcatacaggcctccactaaactggctcttattgcccccaagaaggaattgggagagggg
gaggttcctcacatagagtggtgggactcctacattctgccttcccacatagaactatct
gcacatacacattttgatgaagtggagatgcatggagtcaccaacctagttgaacaccca
attcagatggcccctccagtggatacagataagccagtgactctgggtgtgtatctgacc
aaaaaggagcagaagaaattgaggagacaaactcgcagagaagcccagaaagagttgcag
gaaaaggtccgattgggtcttatgccaccacctgaacctaaagtgcggatctctaatctg
atgagggtattgggaacagaggctgtgcaggaccccactaaagtggaggctcatgttaga
gcacaaatggcaaagaggcagaaagcgcatgaggaggcaaatgcagcacgtaaacttaca
gcagaacaaagaaaagagaagaaggtcaagaaacttaaagaggatttgagtcatggggtt
cacattgcagtttacagaatccgaaatctgcataatccagccaagaaatttaaagtggag
gccaatgcaaatcagctgtacctcactggaaccgtggtacttcacaaagacgtcaacatt
gtagtagtggagggaggccccaaatcacagaagaaatttaaacgacttatgttgagtaga
atcaaatgggatgagccaaattccaagagagatgagcctcaagattcagatgatgagggt
tccagaaagaataataaatgcacattggtttgggagggtacagccacagaacgtagttac
ggggaggttaagtttaaacagtgtccaacagaaagtatggctagggaacattttaaaaag
catggcactgagcactactgggacttggctttgagtcaaagtgttctggagacaactgat
gactga
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