Puntigrus tetrazona (Sumatra barb): 122361128
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Entry
122361128 CDS
T08985
Symbol
nr1d2a
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2a isoform X1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122361128 (nr1d2a)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ptet03310
]
122361128 (nr1d2a)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
122361128 (nr1d2a)
Nuclear receptors [BR:
ptet03310
]
1. Thyroid hormone like
1D. Rev-Erb
122361128 (nr1d2a)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
122361128
NCBI-ProteinID:
XP_043118027
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Position
16:25703863..25712116
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AA seq
593 aa
AA seq
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MCPCVLGVGAPPLIGRDVRGARRPIGRGGTLHNLAHCPDARLSAVPREERQTASDLDILP
VQNMRGPRVGGVIAYVCSSSSAPSPESCMSDSSNSRSPSSSPPLPIKASRLTDLPTAALL
SKHPRGHASDKTPAAKSSITKLNGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQQN
IQYKKCLKTESCTIVRINRNRCQQCRFKKCLSVGMSRDAVRFGRIPEREKQRMLLEMQTA
MNNMMNNSQLQSMLHSDSSSSSPSPPDSPRSSSDLSRDSESAVPMDTASSCSSDSGEEDA
ASSGRGPLGYGSVSPAGSETLGSCGNKEDEEPRETWSRWNERNPVAENNVKTTAGPYREH
VTGYHLTQQCRRSPQNLPQHTNNMNEVQAGANRGHLVCPMSVSPFVDPCKPGHEIWEEFS
KSFIPAVREVVEFAKRIPGFQDLSQHDQVNLLKAGTFEVLMVRFVPLFDVKERTVTFQSG
RKYSVDLLRSMGAGELLNCMFEFSEKLTALQLNEEEMRLFSAVVLVSADRSAIEDVSGVE
ALQETLIRALRNLIMKNHSNEAAVFTKLLLKLPELRSLNNMHSEELLAFKIQP
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgtgcccgtgtgtactaggagtcggggcgccgccgctgattggccgtgacgtgcgcggt
gcgcggcgcccgattggtcgaggcggcacgttgcataatttagcacactgccctgacgcg
agactctctgcagtaccacgtgaggagcggcagacagctagtgacctagatattcttccc
gtacaaaacatgagaggtccacgtgtgggaggcgtgatagcctacgtctgctcctcgagc
tccgcccccagcccggagtcctgcatgagtgacagctctaacagccgctccccgtcgtcc
tccccgcctctgcccattaaagcgagccgtctgacagacctgcccaccgccgcactgctg
tccaaacacccacgaggacacgcttctgacaagacccccgctgccaagagcagcatcacc
aagctcaacgggatggtgctgctgtgtaaagtgtgcggagacgtcgcctcgggcttccac
tacggcgttcatgcctgtgaaggctgcaagggcttcttcagaagaagcatccagcagaat
attcagtataagaaatgcttgaagacggaaagctgcactatcgtacggataaaccgcaac
cgctgccagcagtgccgcttcaagaagtgtttatcggtcgggatgtcccgagacgccgtg
cgtttcggacgcatcccggagcgtgagaagcagcggatgctcctggagatgcagacagcc
atgaacaacatgatgaacaacagccagctgcagagcatgcttcacagcgactccagctcg
tcctcgccctcgccgcccgattccccccgctcctcctccgatctgtcccgagactcggag
tcggccgtccccatggacacggcctcgtcctgctcgtccgacagcggggaggaagacgcg
gcgagctccggacgcggcccgctcgggtacggctccgtgtctccggccggctccgagacg
ctcggcagctgcggtaataaggaggacgaggagccgcgggaaacctggagccgctggaac
gagagaaacccggtcgccgaaaacaacgtgaagaccaccgccggaccttacagggaacac
gtgaccgggtatcacctgacccagcagtgccgtcgaagcccacaaaacctgcctcagcac
acaaacaacatgaacgaagtccaggctggagcaaacaggggacacctggtgtgtcccatg
agcgtttcccccttcgtggacccctgcaagcccggtcacgaaatctgggaggagttttcc
aagagcttcatccctgccgtacgagaagtggtggaatttgccaagcggatcccgggcttc
caggacctctcccaacacgaccaggtcaacctcctcaaggcgggaaccttcgaggtgctg
atggtgcgcttcgtgccgttgttcgatgtgaaagagcggaccgtgacgttccagagcggc
aggaagtacagcgtggacctgctgcgctcgatgggcgccggagagctgctcaactgcatg
ttcgagttcagcgagaagctcaccgccctgcagctcaacgaggaggagatgagactcttc
tccgccgtggtgctggtgtctgcagaccgatcggcaatcgaggacgtaagcggcgtggag
gccctgcaggagaccctgatcagagccctgaggaacctgatcatgaagaaccactcgaac
gaagcggccgtcttcaccaagctgctgctgaagctgcccgagctgcgttcgctcaacaac
atgcactccgaggagctgctcgccttcaaaatccaaccttaa
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