Puntigrus tetrazona (Sumatra barb): 122361132
Help
Entry
122361132 CDS
T08985
Symbol
si:dkey-22o22.2
Name
(RefSeq) neural-cadherin
KO
K27892
neural-cadherin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122361132 (si:dkey-22o22.2)
Cell adhesion molecules [BR:
ptet04515
]
Cadherins
Cadherin related
122361132 (si:dkey-22o22.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Laminin_G_2
Laminin_G_1
Ig_Shg
CADH_Y-type_LIR
EGF
Cadherin_CELSR2_9th
Fibulin_C
Cadherin_pro
hEGF
Cadherin_4
He_PIG
EGF_Hmr-1
EGF_2
EGF_Teneurin
Big_10
3keto-disac_hyd
A2M
Motif
Other DBs
NCBI-GeneID:
122361132
NCBI-ProteinID:
XP_043118034
LinkDB
All DBs
Position
16:21210852..21314454
Genome browser
AA seq
2778 aa
AA seq
DB search
MRAHLRNPTFFRFPTACFLIIFLAISNVRPAVFYGHIEEGAPTGTVVAGFLFPLGDKCKE
FNLAGLKTVLTGRDSSFFLLEYLDNAGFVLKTAKTFDRESKSSYTVSARLPRCSKTAEEV
AVKIEVLNKNNDTRQFNVTTDRTELLTDVKSRVRKPRAVSEEVSYTVTVSEDVKVGDLIF
TVPDQRFEKKWFEVFSDGHSPVQIERDSGRVYLAYRLMSAAEVMVKIHNMRGDEWYLCRL
TLTLPNLSDLQWAMFPYPYLAAVGPDTGAGSVVYKLVARSGDGSMGTAHFILVDGGEDSF
EVDRATGEVKTTGRPLTPSKEYTLTIQAMDSQGRRGPHASVFVLAGFRPPQFTNTTYTIY
IPESTGVGQAVAVVQAISFQRKTLSYMLLVNPSNLFSINQESGALSLTRTVDFESGQHLH
HLQVRASEPDTGLSNMAEVVVHITDENDCTPEFMHSIYSRDNVPETTPAGTSLLQVLARD
CDTGLNAELSYFIQSVDFDISSQGVVSPSQRLDYERPNHMYECTVVAVDKGTPPRTGTAS
IRIRMANVNDEAPVFSQTIYKTFLSEDAGPETLVAIVHAKDPDGDGVTYAITGGNEDSNF
ELDNQKGIIKLRRSPPPKLRGPQYVLNVTATDDNTAGGPLPLSSSAQVIVGINDINNNKP
VFDECHNYSVNALVLENQPPGTFVLRVQAHDADTGVNGEVKYGIMQRDGASPGFTINPDT
GVISTAVSFDRERQREYTLSVTATDQAQEPLIGICQITVLIADQNDNDPKFENSRYQYFL
REDTPVGTSFLRAAAHDDDQGTNAAITYSLSQQNPAYFHINPSTGWIYVNHPISQTSRIS
QQIIATDGGSRSSSVDLTVIITNVHNQPPQWEQAEYWVTIPENTPRDTKIVTIKATSPLG
DPRVTYNLEEGQVPETNMPVRFYIKPNRRDGSASILVAENLDYETTRFFTLRVRVQNVAA
VPLASFTTVYVNITDVNDNVPFFMSSTYEATVPEGAEIGTSVAQVSATDLDSGLHGMINY
IILKDQSGDSQFFSINSYTGIIHTRATFDREQKGSYLIEVQSQDSSESARPGQQGQPNTD
TAYVRVFVTDVNDNAPAFSQPVYEISVEEDKEVGFVVITVTANDEDEGANAKLRYQITSG
NTMGTFDVEPEVGTIFIAQRLDYEQVQRYELRLVASDGKWENQTMVVINVINQNDEAPLF
TQTEYHASVMEELTELPVLVLEVSATDPDQEADQRAVRYSLHGQGAGSEFTIDEINGRIF
AQRRLDREVRSAWQFLVLATDENGAGLTGFADVLVEVQDINDNTPVFLCATDNCFLGHVP
ENSPADTSIMEMRATDLDDPKAGKNAILTYRIVQNVRNEINLNLFSINPATGTIYTVLRS
LDREVVDRYLVVVEARDGGGLSGTGTATIVVSDVNDHPPVFTQRVYMASMPENLDINSEV
VVVAATDGDEGENSVMTFSIIGGDEDRKFFFETDKVNRRGIVRLKKKIDFEKPHERTFNL
TVKVEDADFFSLAYCIIQVEDSNDHAPVFFPQFYEAGSMFEDVPIGTIVAQVTAMDLDSG
QNGRFTYSIAPESDPFQQFLVDKSGWVVVADSLDREKVSQHRLMILATDMGSPALTGSAI
VLVTVQDVNDNGPEFEAPYRPILWENTIAPQVVHMNDTSILLHVIDRDTSSNGGPFSIRL
LMLTSDVTNFNLTDLRNGSAMITALHSFDREQQKQYLLPILMIDSGSPPMSSTSTLTVII
GDKNDHPHAPGHSEFIVYNLQGTLPTTVLGQVQSPDLDDWSEKVYKFEGKPPRQFSLNQN
TGQLSIREGTPAGFYSLQVRVADKSWPDVTSSAEVTVMELEEKALRNAGSIRLANLTANE
FFRASTNEESRYMRLCRLLSDLFQTDMENVDVFSLASGSQPAQHHLSVWFAAHGSPYYKP
EKLHGYVAMHKAKLESALGVTILQVGVDECTYAACGQTGGCSNKVIFSDTPKTLNNGNVS
LVSVSAKASAQCCCLAREGVHLHCSSYSHNPCLNGGTCVDSELGYRCKCPPMFDGPECQQ
TKHSFLGSGYAWFPPIRPCFQSHISLEFITEAGNGLLFYNGPMGTPQPGEKEDFIALELK
NGVPVLSVNHGSGTLTLQLPTRSTVTDRRWHHLDIINDGKTVQMILDHCSGAIVNEVEGL
GAEMFETDQSVCKASGETPGSERFLDVYQPLQLGGIKETHSLRRLHPHYKGFVGCMRNLV
VDSQVYDLGSAAENENSTPGCALTDGVCLTAGGPSCGVHGKCLGEWGSFSCDCNPGYSGH
KCDKALPEWSFEKDSVLRYQLRGGGSPRKTQAHFLLRTRSSMGSLLSMASRDANEFIILE
IVDGYLTVRANLGDGAHSLKLTGHRVNLGQWVFVSLHRYDNIFTLRLEQGGGSREVTGVL
GQRKEIVVHPSSVFLGNTQGDFQGCMRDVRLNGHSLPLDGQGTEFSTVLERRGVVPGCHS
DTCSAKPCLSPLYCVDLWRKHECRCPANQVAVLDEVTGLLHCAPSPCGPTTCRNGGTCLA
HSTKNYQCRCPEGFRGQWCEIGQVKSVRLAALSPSSILAISMCLLVFFAVLVAVTVWNQK
GSRNKFRKRGVYHIPAEHESWEDIRENILNYNEEGGGEQDQNAYDITELKRPLCSSLSQS
SSCTTAPLIKSSQGSQEEVHPCGNITNGATLPYHHNPSCGGHCSMDFKSYVSRIIWEADN
DSLAFPMDTYHVYCIEGMGSSAGSLSSLGSAISEEAFSYDSLRRWGSKFEGLSELYRRPE
LAVPYMDTVHSQSQEQQQ
NT seq
8337 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgcatttacggaatccgacttttttcagatttcctactgcatgctttttaatt
atttttcttgccatttctaatgtgcgaccggctgttttttatggacacattgaggaaggc
gcgcctactggaactgttgtcgctggctttcttttccctctaggagacaaatgcaaagaa
ttcaacttggctggacttaaaacagttttgacaggacgggactcgtcattttttttactt
gaatatctggacaacgcgggattcgtcttaaaaaccgctaaaacttttgacagggaatcc
aaatcgagctatacagtgagcgcgcgcttaccgcgctgcagtaaaacagccgaagaagtg
gcagttaagatcgaggtacttaataaaaacaacgatacgcgacaatttaacgtaacgact
gaccggacagagcttcttaccgacgttaaaagccgagttaggaagccaagagccgtttcc
gaagaagtgtcctacaccgttacagtttctgaagatgtgaaagtcggcgacttgattttt
acggtaccggaccagaggttcgagaaaaaatggttcgaggtgttttcggacggacactca
ccggtccagatagaaagagactccggacgtgtgtacttagcgtatcgtttgatgtcagca
gccgaggtcatggtcaaaatccacaacatgagaggtgatgaatggtacttgtgccgactg
actctgaccctccccaacctgtcagatcttcagtgggccatgttcccatacccctacctg
gcagccgtgggccctgacactggcgctggctctgtggtctacaagcttgtggctcgaagt
ggcgatggctccatgggaacagctcacttcattttggttgatggtggagaagattcattt
gaagtggaccgagcaacaggagaagtgaagaccactgggcgacctctgacccccagtaag
gagtacacactgaccatccaggccatggactcgcagggcaggaggggtccgcacgcttct
gtgttcgtactggccggcttccggccccctcagttcaccaacaccacctacacaatctac
atcccagagagcaccggggtgggccaagcggtggcggtggtccaggctatctctttccag
aggaagactctgtcttatatgttgctggtgaacccaagcaacctgttcagcataaaccag
gagagtggtgcgcttagtctgacacgaactgtggactttgagagcggacaacatctccat
cacttgcaagtcagagcttctgaaccagatacaggactgagcaacatggcagaggtggtg
gttcacatcacagatgagaatgactgcacaccagaatttatgcactccatttacagtcga
gacaacgtccctgagaccacccctgctggcacatccttactgcaggttctagcacgggac
tgtgacacaggccttaatgcagaactgtcctacttcatccagagcgtggactttgacatc
tcatctcagggagtggtgagccccagtcagaggctggactatgagagacctaaccacatg
tacgagtgcacagtggtggccgtggacaagggaacgccccctcgcacaggcacagcctcc
atccgaatccgcatggccaacgtcaacgatgaagcccctgtcttttcacaaactatatat
aaaacctttctttcggaagacgccggcccggagacgctagtggccattgtgcatgccaaa
gacccagatggggatggtgtaacgtatgccatcaccgggggtaacgaagacagcaatttt
gagctggacaaccaaaagggcatcatcaaactaagacgtagccctcctcctaaacttcgc
gggcctcagtatgtcctcaacgtcacagcgactgatgacaacacagccggtgggcccctc
cccctcagcagctccgcccaggtcatcgttggcatcaatgacatcaacaacaacaagcca
gtatttgatgagtgccacaactacagcgtgaatgctctggtcctggagaatcagcccccg
ggcacttttgtgctgcgcgtgcaggctcatgatgccgacacaggggtcaacggggaggtc
aagtacgggataatgcagagggatggggcctcacccgggttcaccataaaccctgacaca
ggtgttatcagtacggcagtaagttttgaccgagaaaggcaacgagagtatacactatcg
gtcacagcgacggatcaagcgcaggagcccctcatcggcatctgtcagatcactgtcctc
atcgctgaccagaacgacaacgaccccaagtttgagaatagccgctaccaatacttcctg
cgagaggacacaccggttgggacgagctttctgagggcagcggctcatgatgatgaccag
ggcaccaatgcagccatcacctactctctgtcccagcagaacccagcctactttcacatc
aaccccagcacaggatggatctatgttaaccaccccatttcacagacatcacggatcagc
cagcagatcattgctacagacggaggaagtcggagcagctcggtcgacctcactgtcatc
atcaccaatgtgcacaaccagcccccgcagtgggaacaggcggaatattgggtcacaatc
ccggagaacacaccgcgcgacacaaagatagtgaccatcaaggcgacgtcccctcttggt
gaccccagggtgacttacaacctggaggaaggtcaggttcctgagaccaacatgcctgtg
cgcttctacatcaagcctaaccggagggacggttctgcatctatcttggtggcagagaat
ctagactatgagacgacgcgtttctttacacttcgagtgcgagtacagaatgtggcggct
gtaccactagcttccttcactactgtctatgtcaacatcacagatgtgaatgacaatgtt
ccctttttcatgtcatcaacgtatgaggcgacggtcccagagggtgcagagattggcaca
tcagttgctcaggtctcagctactgacctggactctggtctccatggaatgattaactac
atcatattgaaggatcaaagtggtgactctcagttcttcagcattaattcctacacgggc
atcatccacacccgggccaccttcgaccgtgagcaaaaaggctcctatttaatcgaagtc
cagtctcaggacagctcagagtcagcccgacctggtcagcagggccaacccaacacagac
acagcctacgtgagggtttttgtcacagatgttaatgacaatgctccagccttctctcag
cctgtatatgagatcagcgtggaggaagacaaagaagtgggctttgtggtcattaccgtt
acagctaacgatgaagatgaaggtgccaatgccaaactgcggtaccagattacctccggg
aacaccatgggcacgttcgatgtggaaccagaggttggcacgatcttcattgcccagcgg
ctagactatgagcaggtgcagcgctacgagttacggctggtcgcctcggatgggaagtgg
gaaaaccagacaatggttgtcattaatgtcatcaaccagaatgatgaggcaccccttttc
actcagactgagtaccacgctagtgtcatggaagaacttacagagcttcctgtccttgtg
cttgaggtctcagccacagatccagatcaggaggcggaccagcgtgcagtgcggtattct
ctacatgggcagggagctggtagcgaattcaccatagatgagatcaatggtaggatcttt
gcccaacgacgtttagatcgtgaagttcgctcggcctggcaattcctggtacttgctact
gatgagaatggggcaggtcttactgggtttgctgatgttctagtcgaagtgcaggatatc
aatgacaacacacctgttttcctgtgtgcaactgacaactgtttcttgggtcacgtgcct
gagaactccccagcagacacttccataatggagatgcgagccactgacctagatgatccc
aaagctgggaaaaatgctattcttacctatagaattgtgcagaatgtgcgcaatgaaatc
aatcttaacctcttctctatcaacccagccaccggcacaatctatactgttttgcgttct
ttggacagggaagtggtggatcgatatcttgttgtagtagaagctcgtgatggaggagga
ctttcaggcacaggaacagccaccattgtagtttccgacgtcaatgaccatcctccagtg
ttcacccaaagggtctacatggcctctatgccagaaaacttggacatcaacagcgaggta
gtggttgtggctgccactgatggtgatgaaggtgaaaattcagttatgacattcagcatc
attggtggagatgaagaccgcaaattcttctttgaaaccgacaaggtgaaccgccgtggc
atagtgagactaaagaagaagattgactttgagaagccacatgagcgcacattcaactta
acagtcaaagtggaggatgctgacttctttagcctggcctactgcatcattcaagtggaa
gactccaatgaccacgctccagtcttcttcccacagttctatgaggcaggatccatgttt
gaagacgttccaataggcaccattgtggcacaggtgacagccatggatcttgactctggt
caaaatgggagattcacatacagcatcgccccagaatctgacccttttcagcagttcctg
gtggataagagcggctgggtggtagtagctgactctctggatagggagaaggtttctcaa
cataggcttatgatcttggccacagacatgggcagccctgctctgactggctctgccatc
gtgctagtaaccgtacaagatgtcaatgacaatggaccagaatttgaggctccatatcgg
cccattctgtgggagaacactattgcgccacaagttgtacacatgaacgacacatccatt
ctgttgcatgttattgacagagacacgtcgtccaacggagggcctttttccatccgcctg
ctgatgctgacttctgatgttactaatttcaacttaactgatctgcggaacggcagtgcc
atgataacagctctccacagctttgaccgggaacagcagaagcagtatcttcttcccatc
ctgatgattgacagcggctctccaccaatgagctccaccagtacgctcactgtcataatt
ggagataaaaatgaccatccccacgcacctggacacagcgagttcatagtgtacaactta
cagggtacactccccacgacggtgcttggacaagttcaatcccctgaccttgatgattgg
agcgagaaggtttacaagttcgaaggcaaaccccccagacagttcagcttgaaccaaaac
accggtcagctgagcatccgagagggaacaccagctggattttacagcctgcaggtgagg
gtggcagataagagctggcctgacgtcacctcatcggccgaggtcacggtgatggagctg
gaggagaaggcattgaggaatgccgggtccattcgactggccaacctgactgcaaatgag
tttttccgagcttctacaaatgaggagagccgatacatgcgtctctgccgcctcttgtcc
gacctcttccagactgatatggagaatgttgacgtcttcagcctggctagtggcagtcag
ccagctcagcatcacctcagcgtgtggtttgccgcccatggctcaccatactacaagcct
gagaaacttcacggctacgtggcaatgcacaaagctaagttggagtctgctctgggtgtg
acgattctacaggtcggtgtggatgagtgcacctatgcagcctgtggtcagacaggtggc
tgctctaataaggtgatattcagtgacacccctaaaacactgaacaacgggaatgtctct
ttggtgtccgtctcagccaaagcgagtgctcagtgttgctgcctcgctcgagagggcgtt
cacctacactgctcctcgtactcacacaacccttgcctgaacggaggcacctgtgtggat
agtgaactaggctacaggtgtaaatgtccccccatgtttgatggaccagaatgccagcaa
accaagcacagttttcttggcagtggttatgcttggttccctcccataagaccttgcttc
cagagccatatctctctggagttcatcacagaagcaggcaatggcctgctgttctacaat
ggcccaatgggaacacctcagcctggagaaaaagaggacttcatcgcactggagctgaaa
aatggagttcctgtgctgagtgtgaatcacggttcggggaccctaactctgcagctaccc
acaagatccactgtcacggaccgtcgctggcatcacctggacatcatcaacgatggcaag
actgtgcagatgattctggaccactgctctggtgccatagtgaatgaggtagaaggctta
ggagctgagatgtttgagactgatcagtcggtgtgcaaggcctccggagagacaccaggc
agtgaaaggtttttggatgtctaccagcctctccagctgggtgggattaaagagacacac
tcactccgtagattacacccccattacaaagggtttgtgggatgcatgaggaacctggtg
gttgactctcaggtgtacgacctcggcagcgcagcagagaatgagaacagcaccccggga
tgtgcccttacagatggtgtatgtctgaccgctggaggaccatcctgtggggtccatggg
aagtgtctgggggaatggggctcttttagttgtgattgcaatcctggatatagcggacac
aagtgtgacaaagcccttcctgaatggtcgtttgagaaagacagtgtactgaggtaccag
ttaagaggtggaggaagtcctcgcaaaacccaagctcacttcctactgagaacccgttcc
tccatgggcagcctgctcagcatggcctcacgtgacgccaacgagttcattatcttggaa
atagtagatgggtacctcactgtccgtgctaaccttggggatggggcccactctctgaag
ctaacaggtcatcgcgtaaacctcggccagtgggtctttgtcagccttcaccgctatgat
aacatcttcaccctgcgtttggagcagggcgggggttcacgagaggtcacgggggtcctg
ggtcagaggaaggaaatagtagttcacccttctagcgtgtttctgggaaacacacaggga
gactttcaaggctgtatgcgggatgtaagactgaacggtcactctctgccgctggatggt
cagggcacagagttcagtactgtgctggagcgccgaggagtcgtgcctggctgtcactct
gacacctgcagtgccaaaccctgcctgagtccgctgtactgcgtcgatctgtggaggaaa
cacgagtgcaggtgtccagccaatcaggtcgcggtgctggatgaggtcacaggtcttttg
cattgtgccccgtccccctgcggccccaccacgtgtcgtaacggtggcacctgtctggct
cactctaccaagaactatcagtgccgctgtccagagggcttcaggggccagtggtgtgag
attggccaggtcaaatctgtccgtctcgccgcgctcagcccgagctccatcctagccatc
agcatgtgtctgctcgtctttttcgccgtgctcgtggcggtgaccgtgtggaatcagaag
ggcagtaggaataagttccgcaagcgaggtgtttaccacatcccagcggagcacgagagc
tgggaggacatccgggagaacatcctcaactacaacgaggagggaggaggagagcaggac
cagaacgcctatgacatcaccgagctgaagaggccgctgtgttccagcttgtcccagtcc
tcctcctgcaccaccgcccccctcatcaagtcgtcccagggatctcaggaggaagtccat
ccctgcgggaacatcaccaacggagccaccctgccctaccaccacaaccccagctgcgga
ggccactgctccatggacttcaagagctacgtgtcgcgcatcatctgggaggcggacaac
gacagcctggcgttcccaatggacacctaccacgtgtactgcatcgagggcatgggctcc
agcgcgggcagtctcagctctctgggttcggccatttcggaggaggccttcagctacgac
tccctgcggcgctggggctccaagttcgaaggcctcagcgagctgtatcgccgaccggag
ctggccgtcccttacatggacacggtgcacagccaaagccaggaacaacaacaataa
DBGET
integrated database retrieval system