Puntigrus tetrazona (Sumatra barb): 122361457
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Entry
122361457 CDS
T08985
Symbol
ptafr
Name
(RefSeq) platelet-activating factor receptor isoform X1
KO
K04279
platelet-activating factor receptor
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04020
Calcium signaling pathway
ptet04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122361457 (ptafr)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122361457 (ptafr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ptet04030
]
122361457 (ptafr)
G protein-coupled receptors [BR:
ptet04030
]
Rhodopsin family
Others
Platelet activating factor
122361457 (ptafr)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
GPR_Gpa2_C
7TM_GPCR_Srx
Tegument_dsDNA
CitMHS
Motif
Other DBs
NCBI-GeneID:
122361457
NCBI-ProteinID:
XP_043118145
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Position
17:complement(10441374..10445941)
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AA seq
368 aa
AA seq
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MIYAARFSVTMHKMTPTIPGAAENNRTDNVFLDSEFRYTVFPVVYGLVFAFGLTANCYAL
YVLHHMRESKAMNEIRIYMTNLTVADLLFVSALPFWISYYTNHGDWRFTDLLCRITGSFF
FINTYCSILFLAVISINRYWAVTRPLVAASSDCWKRGAIVSAFIWVVTLSFSVTFLIQPG
INEDKTTNISRCFEGYHNNADTEKNTVAVAHFIIIGLFFLVFSMVIICNILIAQVLLTQP
ISQPQASTGKRPGGTKRRALRMLCAVIGVFVICFLPHHVVQGPWVLSVLHLRKDWHEKTH
QSLNDAHQITLLLMALNCLLDPLVYCFATTKFRKYIQNHFSKVRNNKHCSRNTLSTAMSL
KSRNQSEL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgatatatgcagctcgtttctccgtcactatgcacaagatgactccaaccatcccaggg
gccgctgaaaataacaggaccgacaacgtattccttgactcagagtttcgttacactgtc
tttcctgtagtctatggtctggtctttgccttcgggttaacagccaactgctatgccctt
tatgtgctgcaccacatgcgggagtctaaagccatgaatgagattcgaatctacatgacc
aacttgactgttgcagacttgctgtttgtgtccgctttacccttctggattagctactac
acgaatcacggtgactggaggttcacagatctcctctgtcgtatcacaggctcctttttc
ttcatcaacacatactgctctattctctttctcgctgtcatcagcattaaccgttactgg
gccgttaccaggccactagtggccgcttcttccgactgctggaaacgtggagcaatcgtc
tcagcgttcatctgggtcgtcactctttcattttcggttacatttctcattcagccagga
ataaacgaggacaaaacaaccaacatttctcgctgttttgaaggttatcacaacaatgcc
gacactgaaaaaaacacagtggccgtcgcccacttcatcattattggcttgttctttctc
gttttctcaatggtgatcatctgcaacattttgattgctcaagttcttctgacacaaccc
attagtcagcctcaagccagcacaggaaagcgccccggtggtaccaagcgtagagctttg
aggatgctgtgtgctgttataggggtctttgtgatctgtttcctgccccaccatgtggtt
cagggtccctgggtgttgtctgtgctgcacttgaggaaagattggcacgagaaaactcat
caaagcttaaacgatgctcaccagatcacccttttgctcatggcgcttaactgcctatta
gacccactggtgtattgctttgccaccacaaagttccgcaagtacatccagaaccatttc
tcaaaggtcaggaataacaaacactgctcacgcaacacattaagcacagctatgtcactg
aagagcagaaatcagagcgaattataa
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