Puntigrus tetrazona (Sumatra barb): 122361463
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Entry
122361463 CDS
T08985
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122361463 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122361463 (lrfn5a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
DHU1_N
C2-set_2
Sp38
Ig_5
Motif
Other DBs
NCBI-GeneID:
122361463
NCBI-ProteinID:
XP_043118153
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All DBs
Position
17:3851020..3892137
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AA seq
790 aa
AA seq
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MEKLLVCLLVIGMAVKAQICPKRCVCQVLSPNLATLCAKKGLLFVPPNIDRHTVELRLAD
NFVTSVKRKDLANMTKLVDLTLSRNTISYITPHAFADLENLRALHLDHNRLTRIANDTFS
GMSKLHHLILNNNQLTLIHMGAFNDLLALEELDLSYNNLETIPWEAIQKMTSLHTLSLDH
NMIEYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGVMNPSSFALSFGGN
PLHCNCELLWLRRLNREDDLETCATPLHLSGRYFWSIPEEEFLCEPPLITRHSHEMRVLE
GQRVALKCKARGDPEPAIHWISPDGKLVSNSSRTLVYNNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELVIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDAKTSSDR
RVVMAEATSSTALIKFNFQRNIPGIRMFQIQYNGTYDDSLVYRMIPPTSKNFLVNNLAAG
TQYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNSGDSGKGTSVTDVHSQTNGAQSQGCTVTPSASKQGALSLEEGE
GCKKSSAAPLPPPPDSQTHTSETSIPDCSTSTSLVSQSWTTPGSSGSLKPKRKPAPKPIP
AACAEPKVEALLNAETQNTNRNNSTALQQPVPTPPPPPSRFKDTPILRRARPSSSKYMTL
PVEGARAKRRYSLNENLSKHHCYIGSQKLGNVFCKRSMSVNGMLVQMANSNLDSEKTAFS
SSEWILESTV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgcttgtctgcttgttggttatcggaatggcagtgaaggcccagatctgt
ccgaagcgctgcgtctgtcaagttctatctcccaacctcgcaacactctgtgccaaaaaa
gggctgctctttgttccgcccaacatcgacaggcacaccgtggagctccggctagctgat
aactttgtcaccagcgtaaaacggaaagacttggccaatatgaccaagctggtggatctt
actttgtccaggaatacaataagctacatcactcctcatgcattcgcagacttggagaac
ctacgagccttgcatctagaccacaaccgcttgacacggatagccaacgatacctttagt
ggcatgtctaagctgcatcacctgattctgaacaacaaccaactcaccctcatccacatg
ggagcctttaacgacctactagccctcgaggagttggacttatcctacaacaacctggag
accatcccctgggaggccattcagaagatgaccagcctacacactcttagtctggaccac
aacatgatcgaatacattcccgaggggactttttccctcctacagaagctcaaccgcttg
gacgtgacctccaacaagctccagaagcttccaccggacccgcttttccagcgcgcacag
gttcttgccacgtctggcgtaatgaatccctcctctttcgctctgagttttggaggaaat
cccttacactgcaactgtgagctgctgtggcttcggcggctcaatcgcgaggacgacttg
gagacctgcgccacacccttgcacctatctggacgctatttctggtccatcccggaggag
gagttcctctgtgagccgcccctcatcacccgccactctcacgagatgagggtcctggag
ggccaaagagtagcactgaagtgcaaagccaggggagatccagaacctgccattcactgg
atatcccccgatgggaagttggtgtcaaactcgtcacgcacgctggtttacaacaacggc
acgttggacatcctgataagcacagtaaaggacacaggctctttcacatgcatttcctcg
aatcccgccggggaggcccaccagactgtggagcttgtcatcattaagcttccacacatt
agcaacagtaccaataacatccaggagcctgacccgggttcttctgacatctccacttca
acaagggcaggagcaaacggcagcaatcacaccggcgatgccaagaccagctccgatagg
agggtggttatggcagaagccacctcgtctacagcactcatcaaatttaacttccagagg
aatatacctggaatacgcatgtttcagattcagtataatggaacctacgatgactctctt
gtttacagaatgattcccccaacgagtaaaaacttcctggtgaataacctggccgccggg
acgcagtacgacctctgcgtgttggccatttacgacgacggcataacctccctcacggct
acacgcgttgtgggctgcgttcagttcaccaccgaatctgaatatctgcgctgccacttc
atgcagtcccagttcttgggcggaactatgatcatcatcatcgggggcataatcgtcgcc
tccgtcctcgtcttcatcatcatcctcatgatccgctacaaggtgtgcaacagcggcgac
tccggcaaggggacctcggtcaccgacgtgcactcgcaaaccaacggggcgcaatcccag
ggctgtaccgtcactccatccgcgtccaaacaaggtgctttgagcttggaggaaggcgag
ggatgcaaaaagagctccgccgctcccctcccgccgcctccagattcccaaacccacacc
tcagagacctccatcccagactgctccacctccacctccctggtaagccaaagctggacg
actcccggctcttcagggtcactaaagccaaagcgcaaaccagcgccaaagcccatcccg
gcggcctgcgccgagcctaaagtagaggcgttgctcaacgcagagacgcaaaacaccaac
cgcaacaactccaccgctcttcagcagccggttccaacccctccaccccctccatcccgc
ttcaaagacactccgattttaaggagggctcgtccgtcttcgtccaagtatatgacactg
cccgtggaaggagcgcgggccaaacgcaggtactctttgaacgagaacctgtcgaaacat
cactgctacattggctcgcagaagctgggcaacgtgttttgcaagcggagtatgtccgtg
aacggaatgcttgtccaaatggcgaactccaatctagacagtgagaaaactgcattttcc
agttcagagtggattctagagagcaccgtgtga
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