Puntigrus tetrazona (Sumatra barb): 122361667
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Entry
122361667 CDS
T08985
Symbol
xpo1b
Name
(RefSeq) exportin-1 isoform X1
KO
K14290
exportin-1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008
Ribosome biogenesis in eukaryotes
ptet03013
Nucleocytoplasmic transport
ptet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122361667 (xpo1b)
03008 Ribosome biogenesis in eukaryotes
122361667 (xpo1b)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122361667 (xpo1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122361667 (xpo1b)
03009 Ribosome biogenesis [BR:
ptet03009
]
122361667 (xpo1b)
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122361667 (xpo1b)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122361667 (xpo1b)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
122361667 (xpo1b)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
122361667 (xpo1b)
Pre-60S particles
122361667 (xpo1b)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122361667 (xpo1b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
122361667 (xpo1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
mTOR_dom
Hydrolase_3
BspA_v
Motif
Other DBs
NCBI-GeneID:
122361667
NCBI-ProteinID:
XP_043118440
LinkDB
All DBs
Position
17:8393406..8407726
Genome browser
AA seq
1071 aa
AA seq
DB search
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGVGPQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDAANV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFHNVTLKCLTEIAGVSVSQYEEQFVSLFTLTMMQLKQMLPL
NTNIRLAYANGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPL
LDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKDFEE
YPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKISA
TLNPSNPVNNQVFIQEYVANLLKSAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaattatgacaatgttagccgaccacgcagccagacagctgctggactttaac
cagaaactggatatcaacctgctggataatgtggtcaactgtctgtaccatggggttggg
ccacagcaaagaatggcccaggaggtgctgactcatttgaaggagcacccagacgcttgg
acacgtgttgacactattctggagttttctcagaatatgaacaccaaatactatgctctg
cagattctggaaacagttattaaaacaagatggaagattttgcccagaaaccagtgtgaa
ggcattaaaaagtatgttgtgggcctcattatcaagacatcatcagatgcagccaatgtt
gagaaagagaaagtgtacattggaaaactcaacatgatactagtacagatactgaagcag
gagtggccgaaacactggcctacatttatcagcgatattgttggagcgagccgcaccagt
gagagcctttgccagaacaatatgatcattcttaagctcctcagtgaggaggtgtttgac
ttctccagtggtcagatgacacaagtaaaagcaaaacacctgaaagacagcatgtgcaat
gagttctcccagatattccaattgtgccagtttgtgatggaaaattcccagaatgctcca
cttgtgcatgctacattagaaactctgctgaggtttctcaactggattcccttgggctat
atctttgaaaccaaactcatcagtactctggtgtacaagtttttaaatgtgccgatgttt
cacaacgtgacgctgaagtgcttgactgagatagcaggagtcagcgtcagccagtatgag
gagcagtttgtcagtctcttcactctgaccatgatgcagctcaaacagatgcttcctttg
aacaccaacattcgattggcgtatgcaaatggtaaagatgatgagcaaaacttcattcag
aacctcagcctcttcctctgcaccttcctcaaagaacacggacagctgatagaaaagagg
ctgaacctcagagagactcttatggaggctctacattacatgttgctggtgtccgaggtg
gaggagacggagatctttaagatctgtttggagtactggaaccacctggcagctgagctt
tacagagagagtcctttctcaacatccacctctcctctcctctcagggagccaacacttc
gatgtaccgccccgcagacagctatatctgccggtgctgtctaaggtacgtttgttaatg
gtgagtcgcatggccaagccagaggaggtgctggtggtggagaatgatcagggggaggtg
gttcgggagttcatgaaggacacagactccattaacctctacaagaacatgagggagacg
cttgtttatcttacccatctggactatgccgatacagagcgtattatgacagaaaagctt
cataatcaggtgaacggtactgagtggtcctggaagaacttgaacacgttgtgctgggcc
attggttccatcagtggagccatgcacgaagaagatgagaaacgcttccttgtcactgtc
attaaggacttgctaggtctatgtgagcagaaaagagggaaggataacaaggccatcatt
gcctccaacatcatgtacatagtgggccagtatccacggttcctacgtgcacactggaaa
ttccttaagactgttgtcaacaaattgtttgagtttatgcatgaaactcatgatggagtg
caggacatggcgtgtgacactttcattaagattgctcagaagtgcaggaggcattttgtg
caggtgcaggtgggagaggtgatgcccttcattgatgagatcctcaacaacatcaacacc
atcatctgtgacctccagccccagcaggtgcatacattttacgaagctgtcggctacatg
attggagcacagactgaccaggctgtacaggaacaccttatagaaaagtacatgttgtta
cccaaccaggtgtgggatagcatcattcagcaggccaccaagaatgtggacatcctgaag
gacccagagacagtaaagcagttgggcagcatcctgaagaccaatgtcagagcgtgtaaa
gctgttggacacccttttgttattcagctgggccgaatctacctggacatgctaaatgta
tacaagtgcctcagtgaaaacatctctgctgccatccaaactaatggtgagatggtgaca
aagcagcctctaatcaggagcatgcgcacagtgaagagagagactctaaagctgatatca
ggctgggtcagccgctccaatgacccacagatggtgggggagaattttgttcctccgctg
ttggatgctgtgcttattgattaccagcgcaatgtcccagcggcaagagaacctgaagtg
cttagtaccatggcaacaatcgtaaacaaactgggtggacacattactggagagatcccg
cagatatttgatgcagtgtttgagtgcacattaaacatgatcaacaaagattttgaagag
tatccagaacaccggacgcatttcttctacctgctgcaggcggtgaactctcactgtttc
ccagcattcctggccatcccaccagctcagtttaagcttgtgcttgactctattatatgg
gcttttaaacacactatgagaaatgtggcagacactggtcttcagattctctacacactg
ctgcagaacgtggcccaggaggaagcagcagctcagagcttctatcagacatatttctgt
gacatcctacaacacatcttttctgtcgtcacagatacatcacatacagctggattgacc
atgcatgcttctattctggcgtacatgttcaaccttgtcgaagaaggaaaaatcagtgca
actctaaacccctcaaacccagtcaacaaccaagtgtttattcaggagtatgtggccaac
ttgctcaaatcagcttttccacacttacaagatgcccaggtcaaagtatttgttactggc
ctattcagtttaaaccaagacatcccagcattcaaggaacacttgagggatttccttgta
cagatcaaggaatttgctggtgaggacacctcggacctgttcctggaggagagggaggcg
tcactgcgtcaggcccaggaggagaaacacaagctgcagatgtcagtgcctggcatcctc
aatcctcacgaaataccagaggagatgtgcgactga
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integrated database retrieval system
