Puntigrus tetrazona (Sumatra barb): 122361728
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Entry
122361728 CDS
T08985
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122361728 (irf2bpl)
04121 Ubiquitin system [BR:
ptet04121
]
122361728 (irf2bpl)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122361728 (irf2bpl)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Atypical E3
122361728 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
Motif
Other DBs
NCBI-GeneID:
122361728
NCBI-ProteinID:
XP_043118592
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All DBs
Position
17:complement(2963017..2966243)
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AA seq
661 aa
AA seq
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MSSAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHMKRN
HGFQEGRSPGPAPPPAVKAQAGMSSKESVQMNHVDGSSKQQQQQQQQQQQPQPGLDRYAL
GTERSRFDYSSIGAHRLPNGLGGPNGFPKSDDGPPELNRQSPNSRRNHGLVAVSGQMSVP
PNLLPQTLLNGPPSAASIAQHSLSGRAPPAPASMGPALALSEQGKRPGSVSSTDQERDLK
EKQRNAEALSELSESLRNRAEDWASKPKIVRDTLITLSNCTPFDVRFKKDHSLLGRVFAF
DAISKPGMDYELKNFIEYPSGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKK
HGSGDWRLLGDLLPESVRFFKEGLGGEMLPQPYIDASCPLLPSALVNMPRAVASGSSLRT
GVRKRKASPEPDSAESEQQRQQWMASQSEALKLTMASGSFAASHGGPPPLGSVHSSRATP
PESAPQNGQSPMAALMSVADTLGNAHSPKDSNSVHSTTSTRHNSSSPVSPASVSGQRRLA
SRNGDISLAGTPSQSGSHQGMDQVHPQNIPDSPMANNGPLCCTICHERLEDTHFVQCPSV
SNHKFCFPCSRESIKAQGAAGEVYCPSGEKCPLVGSLVPWAFMQGEIATILDVKVKKERD
P
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcggcgcaggtctcctcgtcgaggagacagtcgtgttatctgtgcgacctgccg
cgcatgccgtgggcgatgatttgggattttactgagcccgtatgcaggggttgcgtgaac
tacgagggtgcggatcggatcgagtttgtcatcgagacggcgcgccatatgaaacggaat
catggcttccaggaagggagatcccccggtcccgcgccgccgcctgcggtgaaagcacaa
gcgggcatgtcatccaaggagtcggtgcagatgaaccatgtggacggctcgtccaaacaa
cagcagcagcagcagcaacaacaacagcagccgcagcccggcttggaccgatacgcgctc
ggaaccgagagatcgcgctttgattattccagcatcggagcgcacaggcttccgaacgga
ctcggcggaccgaacggcttccccaaatcagacgacggaccccccgagctgaaccgacag
agccctaactcgcgtcggaatcacgggctggtggcggtgtcggggcagatgagcgtgccg
ccgaaccttctcccgcagactctcctgaacggcccaccgtcagcggcgagcatagcccag
cacagcctgtccggacgagcacctccagccccggccagcatgggaccggcgctcgcgctc
tccgagcaaggtaaaagacccggttctgtgtccagcacggaccaagagagagatctaaaa
gagaagcagcgtaacgcagaggctctttctgaacttagtgaaagtttgagaaacagagca
gaggattgggcgagcaaacccaagatagtgagggacacgctgatcacgctttccaattgc
actccgtttgatgtgaggttcaagaaagaccattcccttctaggtagggtgtttgctttc
gacgctatttccaagcccggcatggactatgaactaaaaaactttattgagtatcccagt
ggatctggtaatgtgttttccagtgcgtccggtgtggctaaacagatgtaccaggactgc
atgaaagatttcggcagagggctttcctccgggtttaagtatctggaatatgagaaaaag
cacggctctggtgactggaggctcctgggtgatttactcccagagtctgtgcgtttcttc
aaggaggggctcgggggcgaaatgcttccccagccttacatcgacgccagctgccctctg
ctgccttcagcactggttaacatgccccgggccgtggcgtcgggcagctcgctcaggact
ggcgtgcgcaaacgcaaagcctccccggaaccagactcggcggagagtgagcagcagaga
cagcagtggatggcaagtcaaagtgaggcgctcaaactgaccatggcgtccggctcgttc
gcagcctctcacggcggacctccgcccctggggtcggtgcactccagccgagccacccca
cctgaatcggccccccagaacggacagtcccccatggctgcgctcatgtcggtcgcagac
actttgggtaacgcgcactcaccaaaggacagcaactcggtacactccaccacgtccacc
cgacacaacagtagcagcccggtctcccctgcctcggtgtccggacagcggcgtttggcc
tcccggaacggggacatcagcctggcggggacgccttcccagtcgggttcgcatcagggc
atggatcaggtgcaccctcagaacattccagactcacccatggccaataacggacctttg
tgttgtactatctgccacgaacgtttagaagacacgcacttcgtccagtgcccgtcggtt
tctaaccacaaattctgcttcccgtgttcccgggagagcatcaaagcgcagggggccgcg
ggagaggtatactgccccagtggagagaaatgtcccctggtagggtcacttgtgccttgg
gctttcatgcaaggcgagatagcgaccattttagatgtgaaagtaaagaaagaaagagac
ccttaa
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