Puntigrus tetrazona (Sumatra barb): 122361838
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Entry
122361838 CDS
T08985
Symbol
ubr1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122361838 (ubr1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122361838 (ubr1)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
122361838 (ubr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122361838
NCBI-ProteinID:
XP_043118810
LinkDB
All DBs
Position
17:16441104..16465181
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AA seq
1736 aa
AA seq
DB search
MAESLNGVQLSTKWQEASNRGAAILTHLGEQVPLIYCLETEPQQGEEEQKVEQRLLYPLE
CFLFGEDPCVGLEKLQQYNSSSSAQQCGRVFKEGETVYSCRDCAIDPTCVLCIECFQKSV
HKSHRYKMHASAGGGFCDCGDLEAWKTGPCCSQHDPGTSVTMETDECVMDPGLRERAQML
FHLLLRYTTDMLVWEETYELSEELKPKVKEDTYFCVLYNDEHHSYDHVIYTLQRAIACDQ
NQAQVYTALIDKEGRKAVKRGTLRSCQQAKDNIRRNSEHIIQIPLRVEILHTAVMAHQTF
ALRLGAWFQKIIGYTVGLREVFCQVALEPAPDNNQLCLISRLMLHDAQLYKGARKVVHEL
IFSSLLMDTEFKRQFAMKFTEHYKQLQEDFISDDHQRNISITALSVQIFTVPTLARQLIE
EGNVIQVIIDTVMDMMRAHLDNNNRFQFQGHNPDKFFRVQVIFHDLRYILISKPSVWTET
LRVKFLEGLHVFLRFLCCMQGMEEVKRQLGQHVEVEPEWEAGFTLQMQLRHILAMFQDWC
SSDERVLLLAFQECHRALMSCTNQPFRSEPTDSYMCKQILHAWPYKVSQEPVSIHLPISR
LLAGLYVLLCQTGAIQYLPDFVDPVQLNFTELAEQPLRCVVLAAQVCADMWRRNGLSLVS
QVYYYQDVKCRDEMFDKDVIMLQVAASKMDPNHFLMLVLLRFELFDMFNGNSSSKDQEVL
KQWNRLTEEMLYLLIIIVGERYVPGISHVTKEDVTMREVIHLLCIEPMAHSSLVKSLPEN
ESHETGLETVISKVAIFKKPGVSGHGLYELKKECLKEFNPFFYHYSRPQHSKAEEAQKKR
RTQEGSDKALRPPAPPPFCPAFSNIAYLLCCDIFIHILKRIFQKAAEDRSNRWTEPMIQR
ALHLVGQALLEEKTQLESSSTDEVAFDFSLKAQKSGSEHGKSLFHFLTKIKSSPSLKAQN
DMIMWNLQMFEVVKCLREKSGPVASFSVDHSKLEESVQDKEKAERKRKAEAAKAHRQKIM
AQMSAMQKNFIESNKMLYDNVPESSSQSDTAASVDSFRMDVDESRVAVGPQQGVCSSDWE
AQICILCQEEQEVQAQAPAMVLTACVQRSTVLTQSRGKTLSAKVGSYPLLMSPDLAVGTH
TGSCGHVMHATCWQKYFEAVQNTTRNRLHADLIIDLENGEYMCPLCKSLCNTVIPLIPVE
PSKLNYESAELVGQHLTLERWIQIMSSRIRGLRGTWETDSNSEEAAEEAAPLFDECQAEF
RSILSFGVQEPPEFSRSITEMLGVCATTVHRVGLQTAPNDLCPYVPVMSWNTCAYTIQAI
ENMLQEEGKPLFGSLQNRQLSGLKALVQFSAAQRLKSSQAVIQRHFADMLAVLVPLPNVE
NTPSMIEVDFFHLLVGLVLSIPALYQEEAVDLHPSAVSTAYNHLHLLHLLTMTHMLQVLL
ASHDCAVIGGSGEGDEAQAAAELFSIVSQHTDRLRAGVTGFCVEGVKRGVLPFLRCAALF
FNCLTGVPPPEELSGTAESPESQLHLLCSYLSLPSNLFQLFQDHRDVVTPLIKRWFENTA
ISKALKGEMQIIRYPRKRNRLIDLPEDYSVLLNQASHFKCPNSSDDERKHPTLCLLCGVM
LCAHSTCCQEQLNGEEVGACTAHAAVCGAGVGMFLRVRECEIILMASKTRGSLYPAPYLD
DYGETDPQLGRGNPLHLCPERYRKLLHMWQQHCVLEEIARSLEVLNVMFPFEWQMF
NT seq
5211 nt
NT seq
+upstream
nt +downstream
nt
atggcggagtctctgaacggagtacagttgagcacgaaatggcaggaagcttcaaacaga
ggggctgccatactcacccatttaggggagcaggtccctctgatttactgcctggagacg
gaaccgcaacaaggggaggaggagcaaaaggttgagcaacgcctcttgtaccctctggag
tgcttcctgttcggggaggacccctgtgtcggcctggagaagctacagcaatacaacagc
agctcatcagctcagcaatgtggacgcgtctttaaagaaggagagaccgtctactcctgc
agggattgcgcaatagatcccacctgtgtactctgcatagaatgtttccagaaaagcgtg
cacaaaagtcatcgctacaagatgcatgcctcagcgggaggaggtttctgcgactgtgga
gatttagaggcttggaagaccggaccctgctgctcccaacacgaccctggcacttcggtt
actatggaaacggatgagtgtgtgatggatccgggccttcgagaaagggctcagatgctg
ttccacctgctgctgcggtacacgacagacatgctggtttgggaagaaacctacgagcta
tcagaggagctgaagccaaaagtaaaggaagacacctacttctgtgtgctatacaacgat
gaacatcactcgtacgatcacgtcatctacacgcttcagcgagcgatcgcctgtgaccag
aatcaggcccaagtctatacagcacttattgacaaggaagggcggaaagcggtgaagaga
ggtactctcagatcctgccagcaagccaaggacaatatcaggcgtaactcggagcacatt
atccagatacctttgcgtgtggagatccttcacaccgctgtaatggctcatcagaccttc
gccctcagacttggcgcatggttccagaagattattggctacacagtcggcctcagggag
gtgttctgccaggtggctctggagccggctcctgacaacaatcaactctgcctgatcagt
cgactcatgctgcacgacgcacagctttataaaggagcccgcaaggtagtccacgagtta
attttcagtagtttactgatggacaccgaattcaagaggcagtttgccatgaaattcaca
gagcactacaagcaacttcaggaagacttcatcagcgacgaccatcagaggaacatctcg
atcacagccttatcggtgcagatcttcactgttcccactttggccaggcagttgatagag
gagggcaacgtcatccaggtcattatagacaccgtgatggatatgatgagggcacatctg
gacaacaacaaccgcttccaattccagggccacaaccctgacaagttcttccgggttcaa
gttatcttccatgacctcaggtacattctaatcagtaagccctctgtgtggaccgagacg
ctgagggtcaagttcctcgaaggtttgcacgtctttcttcgcttcttgtgttgtatgcag
gggatggaggaagtgaagaggcagctcggtcagcacgtcgaggtggagcccgagtgggag
gcgggcttcaccctccagatgcagctgcgccacatcctcgccatgtttcaggactggtgt
tcttctgacgagagggttctgttgttggcctttcaggagtgtcacagagctctgatgtcc
tgcaccaaccagcccttccgcagcgagcccacagacagctacatgtgcaagcagatcctc
cacgcatggccatataaagtctcccaggagcccgtctccatccatctgcccatctccaga
ctcctggctggtttatatgtgctgctctgccagactggagcgatccaatacctccccgac
tttgtggatcccgtgcagctgaacttcaccgagctggcggagcagcctctgcgctgtgtt
gtgctggcggctcaggtgtgcgctgacatgtggcgcagaaatggcctgtcgctcgtcagc
caggtgtattactatcaggatgttaagtgcagggatgaaatgttcgataaggacgttatc
atgttgcaggttgctgcttccaaaatggaccccaatcatttcctcatgcttgttcttttg
agatttgaactgtttgatatgtttaatggcaactcctccagtaaagatcaggaggtactg
aaacagtggaataggttaacagaggagatgctttacctgctaataatcattgtgggtgaa
cggtacgtgcctggaatcagtcatgtgactaaggaggacgtgaccatgagggaggtcatc
catctgctttgtattgaacccatggctcacagcagcctggttaaaagcctgcctgaaaat
gaaagccatgaaacagggcttgaaaccgtcatctctaaggttgccattttcaagaaaccg
ggagtgtctggccatggcttgtatgaactaaagaaggaatgtctgaaagagttcaacccc
ttcttctatcattattccagaccgcagcatagtaaggcagaagaggctcagaagaagagg
agaacccaagagggcagtgataaagccctccgccccccagcgcctcctcccttctgtccg
gcgttctcaaacatagcgtacctgctctgctgtgacatcttcatccatattctgaagaga
atcttccagaaagcagcggaggaccgttccaaccgctggactgaacccatgatccagagg
gccctgcatctcgtaggccaggctctgctggaggagaaaacgcagttggaaagcagcagt
actgatgaagtggcatttgactttagtctgaaagcacagaaatctggttcagaacacggc
aaatctttgttccacttcctgaccaaaataaagtcttcgccttctctgaaagcccagaat
gacatgatcatgtggaacttacagatgtttgaggtggtgaagtgccttcgggagaagtct
ggacccgtagcttcgttttctgtggatcacagcaagttggaggagagcgtccaggataaa
gagaaggccgagcgcaagaggaaagctgaggctgctaaagcccacaggcagaagatcatg
gctcagatgtcggccatgcagaagaacttcatagagtccaacaagatgctttatgacaac
gttcccgagagctcgagtcagagcgacaccgctgcatctgtcgacagcttcaggatggat
gtggatgagagcagggtggctgtgggtcctcagcagggcgtttgttcctcagactgggag
gctcagatctgcatcctgtgtcaggaggagcaagaggtccaggctcaggcaccagccatg
gtcctcacagcttgtgtgcaaagatctactgttctcacccagagccgcggaaagacgctc
tccgctaaagtaggcagctatcccttgctcatgtcccctgatctggctgtgggaacacac
accggcagctgtggccatgtgatgcacgccacctgctggcagaagtacttcgaagctgtg
cagaacaccactcggaatcggctgcacgcagatctgatcatagacctggaaaacggagag
tacatgtgtccactctgcaagtccctttgtaacacggtcatccctctgatccctgtggag
cccagcaagcttaactacgagagcgctgaattagtcggtcagcatctcactctggagcgc
tggattcagatcatgtcttctcggatcagagggctgaggggtacgtgggaaacggacagt
aacagcgaggaagcggcggaggaagcagcgccgcttttcgatgagtgtcaagctgaattc
agatccattctcagttttggagttcaagagccgccggagttctctcgcagtatcaccgag
atgctgggggtctgtgcgaccacggtgcaccgggtgggactgcagaccgcccccaatgac
ctgtgcccgtacgtgcccgtcatgtcctggaacacgtgtgcctacaccatccaggccatc
gagaatatgttacaggaagaagggaagcctctttttggatccctccagaacagacagctg
tctggactcaaagcgttagtgcagttttcagcggctcagaggctgaagagcagtcaggct
gtcatacagaggcattttgctgatatgttagcagtcctcgtacctcttcctaatgtagaa
aacacaccttcaatgatagaagtggacttttttcatctactggtggggctggttctgtcc
atcccagcgctgtatcaggaagaggctgtagacctgcatccttcagcagtcagcacagcg
tacaaccacctccacctgctgcacctgctcactatgacacacatgctgcaggtccttctg
gcctcgcacgactgcgctgtaataggagggtcgggggagggcgacgaggcccaggctgct
gcagagctcttctctattgtgtctcaacacacagacaggttgagggccggtgtgaccggg
ttctgtgtggagggcgtaaagagaggcgtgcttcccttcttgcgctgcgctgcgctcttc
tttaattgccttacaggagtgccccctccagaggagctgtctggtactgcagagtcacct
gaaagtcagctgcatctgttgtgtagttacctctctttgccctccaacctgtttcagctg
tttcaggaccacagggatgttgtaacccccttaataaagaggtggtttgagaatacagcc
atatccaaagccctcaaaggtgaaatgcaaatcatcaggtacccccggaagagaaacagg
ctaatagatcttccagaggactacagcgtgttgctcaatcaagccagtcactttaaatgc
ccgaactcctcggatgacgagcggaagcacccgactctgtgtcttctgtgcggggtcatg
ctgtgtgctcacagcacctgctgtcaggagcagctgaacggggaggaagtgggcgcctgc
acggctcacgctgccgtctgcggggccggggtgggaatgtttctcagggttcgggagtgt
gagatcatcctgatggccagtaagacacggggcagtctctatccggcaccttaccttgac
gactacggagaaacggaccctcagcttgggcgagggaacccgctgcacctgtgtccggag
cgctaccgcaagctgcttcacatgtggcagcagcactgtgtcctggaggagatcgcccgc
agtctggaggtcctcaacgtcatgttccccttcgagtggcagatgttttga
DBGET
integrated database retrieval system
