Puntigrus tetrazona (Sumatra barb): 122362108
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Entry
122362108 CDS
T08985
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122362108 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122362108 (capn3a)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
122362108 (capn3a)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C2: calpain family
122362108 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
122362108
NCBI-ProteinID:
XP_043119329
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Position
17:complement(20939555..20954323)
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AA seq
725 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPIRFSGQDYNVLKQEYLQKKALFEDESFPATV
DSLGFKELGHKSNKVKNIVWKRPKEICDNPQFIVGGASRTDICQGDLGDCWLLAAIASLT
LNDKLLYRIVPQEQSFSEGYAGIFHFQFWHYGDWVDVVVDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTAEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTTTGLVKGHAYSVTAVEECKQSQQKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWETLSKGEKEKLQQQNAEDGEFWMSFDDFKKNYTKIEICNLTPDALEDD
KLHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDDEVACTFVVAL
MQKNRRRECKLGANLFTIGFSIYEVPKEMHGNKQHMQKEFFMSSTSKARSRAYINLRQVT
QRFRLSPGEYVIVPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPAPASTGEES
EEDQQFLSIFQQIAGDVSTGEPLSAGGSQMEISANELKDVLNKVVSKLKDIHTEGFSRES
CRSMIALMDMDGKGRINLQEFRHLWNKIKQWQEIFKRYDFDHTGTISSYEMRNAINDAGF
RLNNQLYDIITMRYANESMNVDFDSFVSCLVRLEGMFRAFQAFDQGGDGTIRLNVLEWLQ
LTMYA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacgccatccgggtttttttgcgaccggttaatccgcgaaagagagaggaga
gacggcgaaggatccctgagcaaacccattcgtttcagtggccaggactacaacgtcctc
aagcaggagtatctccagaagaaggccctttttgaggatgaatccttccccgccactgtg
gactcccttggcttcaaagagctgggacacaagtccaacaaagtcaagaacattgtctgg
aagcgtcccaaggagatatgtgataacccacagttcattgtcggaggggctagcaggaca
gatatctgccagggagacctgggagactgctggttgctggcggccatcgcatccttgact
ctgaacgacaagctgctgtatcgtatcgtacctcaagagcagagcttctccgaaggctac
gctggaattttccatttccagttctggcattatggagactgggtggatgtcgtcgtcgac
gaccgcattcccaccttcaacaaccagctggtgttcaccaaatccgctgaaagaaatgaa
ttctggagcgctctgctggaaaaagcttacgctaagctgcacggttcctacgaggctctt
aaaggaggaaacactgctgaggccatggaggacttcaccggtggagtgactgaattctat
gagatgaaggaggcccctaaagagctgtacaagatcatgaagaaagctctggagagaggc
tccctcatgggctgctccattgactccctggttccagcccgttttgaaactcgtactaca
acaggacttgtgaagggtcatgcctactctgttactgctgtagaggagtgtaaacagtcc
cagcagaaggagtctaaagtccgtctggtgcgtctgcgtaacccttggggtcaggtagag
tggaatggaccttggagcgataattcaaaagagtgggaaactctctccaaaggggaaaaa
gagaaacttcagcagcagaatgctgaagatggagaattctggatgtcatttgacgatttt
aagaaaaattacactaaaattgagatttgcaacctgacccctgatgctctggaggacgat
aagttacacaaatggacagtgtctgttaatgagggacgctgggtaagaggatgctccgct
ggaggatgcaggaattatccagacacattctggacaaatccacagtaccgcctgcgtctc
ttggaggaagatgatgacccggaggatgatgaggtggcttgcacttttgttgtcgctcta
atgcagaaaaacaggcgtagagaatgcaagctgggtgcaaatctcttcactatcgggttt
tccatctacgaggttccaaaggagatgcacggaaacaagcagcacatgcagaaggagttc
ttcatgtccagcacctctaaggctcgttccagggcctacatcaacctgcgccaagtgacc
cagcgtttccgcctgagccccggggagtacgtcatcgtcccctccacctacgagccgcac
caggaaggcgagttcatcctccgcgtcttctctgaaaagagaaatacctctgaggagata
gagaacaggattgaagctgatcatccagtgccggctccggcttcgactggggaagagagc
gaggaggaccagcagttcctgtctattttccagcagatcgcgggggacgtgagtactggg
gagccactgagcgctggggggagtcaaatggagatctcagccaatgaactcaaagatgta
ttgaacaaggtggtgtccaaactcaaggacatacacaccgagggcttcagtcgagagagc
tgtagaagtatgattgccctcatggatatggatggaaaaggaagaatcaatctacaagag
ttcagacacctgtggaacaaaatcaaacagtggcaggaaatctttaagcgctacgacttc
gatcacaccggcactatcagcagctacgagatgaggaacgccatcaatgatgcagggttc
cgtctgaataaccagctctatgacattatcaccatgcgctacgccaacgaaagcatgaac
gtcgactttgacagtttcgtcagctgccttgtgcgactggaggggatgttcagagcattc
caggcctttgaccaaggtggagatggcaccatcaggcttaacgtactggagtggcttcag
ctgaccatgtacgcgtag
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