Puntigrus tetrazona (Sumatra barb): 122362115
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Entry
122362115 CDS
T08985
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122362115 (exd1)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122362115 (exd1)
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF1137
Motif
Other DBs
NCBI-GeneID:
122362115
NCBI-ProteinID:
XP_043119341
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Position
17:16970098..16975102
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AA seq
373 aa
AA seq
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MAWCSEESRFLEDLKRKRVKVRLSDTQISGVIQRVTHRRSVLLEDVSEVKSGRKFPGVKI
IFGHEILKVEFSGSANQDSLVDEEHRSEDSFRKKTAADEDEDSVSYVLIDELHEKFGPAV
MHIQQQKVVAIGAEVFGQIAQERLCWLQVATKRVVYLFDLLLLGAQAFKNGLSMILENPH
ILKVVHDGRCVSRCLRAEFRVHLTNVFDTQVADLMLFYRETGGFLPDRVSSLQELLRLHL
KLPVSDLSPLRSKELRRKECPEVWYVRPAPPALMNIMAASVSHLLPLRLVLLDALMSDFT
ILVDAYMSSCHHQSLQTEQGEGALPAVVEELLAVRQERMDWAARRYSLTDAGLLRRSSFT
HTEVTLKKPDKPV
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtgttcagaagagagcaggtttctggaggatctgaagaggaagcgtgttaaa
gtccgtctctcggacacacagatcagcggcgtgatccagcgcgtgacacaccggaggagc
gtgctgctggaggacgtatctgaagtgaaaagcggacggaaatttccaggcgtcaagatc
atcttcggacatgaaattcttaaagtggaatttagcggttctgccaatcaagacagcctt
gttgatgaagagcacagatctgaagactcgttcaggaagaagaccgcagcggatgaagat
gaggacagtgtgagttatgtcctgatagatgagcttcatgagaagtttggccctgcagtt
atgcacatccaacaacaaaaagtcgtcgcaatcggggctgaggtttttggacagattgca
caagagagactttgctggttgcaggttgccactaagagagtcgtgtacctgtttgatctg
ctcctgctgggcgcgcaggcgtttaaaaacggcctgtccatgatcctggagaaccctcac
atcctgaaggtggttcatgacggccgctgcgtgtcccgatgcctgagagcggagttcaga
gttcacctcaccaacgtctttgacacgcaggtggctgatctcatgctcttctacagagag
accggaggctttctcccggaccgggtcagctctctccaggagctcctccggcttcatctc
aagctgcccgtctctgacctttcacccctgcgctccaaagagctccggcgcaaggagtgt
cccgaggtgtggtacgtccgtcccgctccacctgccctcatgaacatcatggccgcttcg
gtcagtcatcttctcccgctgcgcctcgtgcttctggacgccctgatgtcagatttcacc
attctggtagacgcttatatgagcagctgtcaccaccagtctcttcagactgagcagggt
gaaggagcgctcccagcggtggtggaggagctgttagcggtgcgtcaggagcggatggac
tgggcggctcgacggtactctctgaccgacgccggcctgctgagacgctccagcttcact
cacaccgaagttactctaaaaaagcctgataaacctgtttga
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