Puntigrus tetrazona (Sumatra barb): 122362119
Help
Entry
122362119 CDS
T08985
Symbol
atg2b
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 2 homolog B
KO
K17906
autophagy-related protein 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04136
Autophagy - other
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122362119 (atg2b)
04136 Autophagy - other
122362119 (atg2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122362119 (atg2b)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122362119 (atg2b)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122362119 (atg2b)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122362119 (atg2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
122362119
NCBI-ProteinID:
XP_043119345
LinkDB
All DBs
Position
17:21747789..21768288
Genome browser
AA seq
2078 aa
AA seq
DB search
MPWPFSESIKKRACRYLLHRYLGNFLQEKLSLDQLSLDLYQGTGSLAQVPLDKWSLNEIL
ESVDAPFEVSEGFIQAISLTVPWASLLQENCALEVRGLEMVFRPRPRMASGMEPMCWSSF
MTSSMQLAKECLSQRLTDDQGESLQPLEGLEKFAETIETVLRRVKVTFVDTVLRMEHVPE
NSKTGIALELRINKMVYCDESVEEGSSVNIHQPTTFAHKNLTLEGAYVFWDEFSESARAG
LKSSPTQTETEPKLSPSWNPKIICEPHPQFPEPVSSSAPFEPVQVGCLSGKLELSVVLKQ
NEAMPGAKLDIDGQFDSLIMLLSPQQVHLLLDMFGVFSSSAGQEWSAIGKDRKSRPMQQE
DEYRLHMELNRCLKKDTITVATDQDLFESQTARTVSSREDVFFSMADMDMSHSLSSLPPL
GDPPTVDLDLSVNSNYSASLGESPSGNVATVWDEYMDVPRQKEKQTNEMPHLSRDSQLTH
KLLRQTSHPTKGHCDESRPELVLRLTVGSLCLSVLHIDPLPPPDSSRSHLAPMASEFFRI
LSVNQLPAGSFLQSRTVFDEACPHDHLRFIGQGLKVTYEHCQGSSVRTLNTDLSLSQLEL
LECLYSTDSHTTQSGAQYTELLTFDVSASSDSPPPVCLHLLYKLTERRGPQGGQVRLSTI
PRKAELQMELGKVRSECDVSIVDRLNSLLQPQKLVTTEMMASHMYTSYNKHVSLHKAFAE
VFLDDSRTPAHCHVSMSINAPLLVLVVRFPIPDLRSDQERGPWFKKSLQKEVLQLELEDL
ELKTEFTGGNSSEQTKMELTFKELNGSFQEDKDHPAARFLRVANTMEEDMTSSDCGKFDW
PRVVLKLNPMAVRSILERVTAEEEEEEADGHSQEEEEEEEGASHSLKDVCDFGKPEPSPF
SSRRVMYENEEMVIPGDVVEMTEFQEKTMSNSLYILELFFPNVQLSLPNKGFYEKLHNRI
NNDLLLWEPTAPSPVETVENIPYGVGLSVASQLINTYSKDSFSQFRSTGPEEEESGSEEE
ILQYYTPAELGYRNRRKKRSKMQPKNSQSLFSIVLSVNHGLLALHTQLKEDDNGVLPKKH
GEFWMEVKTXTLFGVTQHEGYKDQHYVCFHTSQACLYHHGTVDGDAPEWSVNLPCRTRPH
WLEPVMYASESAPERASPSEGLSLEPHSMLSVAVKISSHNTERNVKEFLIAIGVRGVTLE
HRVVPSSLGWYDQIVDFLNVSDEPVLGYTPPSSVSTLHLHLWSCALDYRPLYLPVRSLLT
VETFSISSSVSLDHSSSSLRIILDEAALFLSDKINAVSVNLARDYVQVVDMGTLELRITA
VKPGQDGKMTEPRFELRCSSDVIHIRTCSDSCAALMNLIQYIASYGDLLPPSGLEAKRRS
TKQRVMTEAASHPPAQAPLLPEAEQQILQDLMSDAMEETDSLQSHMLQQNGVNEDHSHDH
DPPRSDLFLFPDESGNLGQEPSPTYPVLHSPLISPPAPSLLHDADDFCILDTPGSRVLEK
DEEPVVKKLISEPILVREDHFCVPLEGSSSNRGPLHFPVPEIRYLVKEISVVWHLYGGKD
FGGGALSSSPARSRGCTPHSSPSQTPVKQVRRGSRAGGGWGRNPDVLMEIQLSKVRFQHE
VYPQAAETGVLTEQPVSRQVFSVQDLEIRDRLASSMMNKFLYLYSSKEMPRKAHSNMLTV
RALHVCPEAGQAPQECCLRVSLMPLRLNIDQDALFFMKDFFSSLAAEVELFSPPEQEAFC
VSVKKPPVPEVSCNFSKYNGAAGQDPAPIISVPTQSRASPSLLRSSSQDSTAETDTASTS
FTDQPIFFREFRFTSEVPIRLDYHGKHMAMEQGTFAGIVIGLTQLNCSELKLRRLCYRQG
LLGVDKLFSYAINEWLNDIKKNQLPGLLGGVGPIHSLVQLVQGFRDLVWLPIEQYRKDGR
IVRGFQRGTASFGTSTAMAALELTNRMVRTIQAAAETAYDMVSPVPDEKECKKIKRYSHY
CLAHQPVDLREGVAKAYSVVKEGITDTALTIYDTATREHEQRGMTGAVGGVLRQLPPAVV
KPLIVATEATSNVLGGMRNQIHPDARQEESQKWRLGEE
NT seq
6237 nt
NT seq
+upstream
nt +downstream
nt
atgccatggccattttctgagtctattaagaagcgggcctgcagatacctgctgcatcgg
tatcttggtaatttcctccaggagaagctcagtttggaccagcttagtctggacctctat
caaggcactggctcacttgctcaagtgccactggacaaatggtccctgaatgagatcctg
gagtctgtggatgctccatttgaggtgagtgagggcttcatccaggccatttctcttact
gtgccatgggcctcactgctacaggaaaactgcgcactggaagtgaggggcttggagatg
gtgttcaggcccagacctcgaatggcatcaggcatggagcccatgtgctggtccagcttc
atgaccagcagcatgcagctggccaaagagtgtctaagccaaagactcactgatgatcag
ggagagagcttgcaacctctggagggtctggaaaagtttgcagagactatcgagacagtg
ttaagaagagtcaaagtcacttttgtggatactgtcctgcggatggaacatgttcctgaa
aattctaaaactgggattgcccttgaactccgaatcaataagatggtttactgtgatgag
agcgtggaggagggctccagtgtcaatatccatcaacccaccacatttgcacataaaaac
ctcacgctggaaggtgcctatgtgttctgggatgagttttcagaatcagcacgtgccggc
ctcaaatcttcccccactcaaacggagactgaacccaagctttcgccaagttggaaccca
aaaatcatctgtgagcctcaccctcagttcccggagccggtgtcttccagtgcaccgttt
gagccagtgcaagtgggctgccttagcggtaaactggagctgtccgtggttctgaagcaa
aacgaagccatgcctggggctaagttggatattgatgggcagtttgattctctaatcatg
ctgctttcaccgcaacaagtccacctcctactggacatgtttggggttttctctagctca
gccggacaggagtggtctgctataggaaaggacaggaagagtcggcccatgcagcaggag
gatgagtatcgcctccacatggagctcaaccgctgcctcaagaaagacaccataacagtt
gctactgaccaggacctgtttgaaagccagaccgccagaacggtgtccagtagagaggac
gtctttttctccatggctgatatggacatgtcacatagcctatcgtctctgcctcctctt
ggagatccacccactgtggatctagatttgtctgtaaatagcaactactctgcctccctt
ggggagtcgccatctggaaacgtagccacggtgtgggacgaatacatggacgttcctaga
cagaaggagaagcagacaaatgagatgccacatctttcccgagattctcagctaacccac
aaattgctccggcagacatctcatccaactaaaggccattgtgatgagtccaggcctgag
ctggttctcaggctcacagtgggcagtctctgcctgtctgtcctccatattgaccccctc
ccacctccagactcctcccgcagccatcttgcacctatggcttcagaatttttccgtatt
ctgtctgtaaatcaactccctgctgggagtttcctgcagtcgcgaactgtcttcgacgaa
gcctgtccacacgatcatctcaggttcattggtcaaggattaaaggtgacatatgagcac
tgtcaaggctccagtgtacgtacgttaaacacggatctctctctgagccagctggagctt
ttggaatgcctgtactctactgacagtcacactacacagagtggagcccagtacacagag
cttcttactttcgatgtctcagcaagtagtgattctcctcctcctgtatgcctgcattta
ctctacaaattaacagaacgtagaggcccgcagggcgggcaggtacgtcttagtactata
cctcgtaaagcagaattgcagatggagctaggtaaagtgcgctccgagtgtgacgtcagc
attgtggacaggctcaactcccttcttcagcctcagaaactggttaccacagagatgatg
gcatctcacatgtacacctcatacaataaacatgtcagcctgcataaggcctttgcagag
gttttcctggatgatagtcgtaccccagcacactgccatgtgtctatgtcaataaatgca
cctctgctggtgctagtggtgcgcttcccgatcccagacctgcgctcggatcaggagagg
ggcccttggtttaagaagtccctgcagaaagaggtgcttcagctggagctggaagatctt
gaactcaagacggagttcactggaggaaactcatcagagcaaactaagatggagctcact
tttaaagagctcaatggatcattccaagaagacaaagatcaccctgcagccaggttctta
cgagtagcaaacaccatggaagaggacatgacatcttcagactgtggcaaatttgactgg
cccagagtggttctgaagttgaaccccatggccgtgcgctccatcttagagcgtgtaaca
gcggaggaagaggaggaagaagcagacggtcactcgcaagaagaagaggaagaagaagaa
ggagcctcccactccctgaaggacgtgtgcgattttggcaaacctgaaccatcccccttt
tcctcaaggcgtgtcatgtatgagaatgaggagatggttatcccaggagacgtggtggag
atgacagagttccaggagaaaaccatgagcaactccctttatatccttgagctgtttttc
cccaatgttcagctttctttgcccaataaaggcttttatgaaaaactacacaacaggatt
aataatgacctgctgctctgggagcccactgctccatctccagtagagaccgtggagaac
atcccatacggagtgggtctgtctgtagccagtcaactcattaacacctacagtaaagac
agcttcagtcagttcagatctactggcccagaggaggaggagagtggttctgaggaggaa
atcctacaatattacactcctgctgagctgggctacaggaatagaaggaagaaaaggagt
aagatgcagcctaagaattctcagagcctcttttccattgtcctgtctgttaaccacggc
ctgctggctctgcacacgcagctaaaggaggatgataatggtgtattaccaaaaaaacat
ggtgaattttggatggaagtaaaaacgnngacgctgtttggtgtgacgcagcatgaaggc
tacaaagaccagcattatgtctgcttccacacgtcacaggcctgcctgtatcaccatggc
acagtggacggagatgcccctgagtggagtgttaatctgccctgcaggacgcgtcctcat
tggctggagcctgtgatgtatgcgtctgaatctgccccagaaagagcatctccctctgaa
gggctcagtttggagccccacagcatgctgtctgtcgctgttaaaatttcctcccacaac
acagagcgcaatgtaaaggagtttctcatagccattggtgtgaggggagttacactggag
cacagagtggtgccttcaagtctgggatggtatgatcagatagtcgactttctaaatgtg
tcagatgagcctgtgctcggctacacacccccatcatctgtgtccacccttcacctgcat
ctatggagctgcgccctggattacaggcctttatatttacccgtgagatctctgctgacc
gtagagaccttcagcatctctagcagtgtgtctttggatcattcttcttctagtctaaga
ataattttagatgaagctgcattgtttctgtctgacaagatcaatgctgtgtctgttaat
ttggcacgagactatgtccaggtggttgatatggggactctggaattgaggatcactgca
gtgaaaccaggacaagatggcaaaatgacagagccgaggttcgagttgcgttgctcaagt
gatgttattcacattcgcacctgttcagactcctgtgccgctctcatgaacctcattcag
tacatagccagctatggagatctactgcccccttctggactggaggctaaacgcagaagc
actaaacaaagggtgatgactgaagcagcgagtcacccaccagctcaggcacctttgctt
cctgaagcggaacagcagattcttcaggatctgatgagtgatgctatggaagagacggac
agtctgcagagtcacatgctgcaacagaacggtgtgaatgaagaccactcacacgatcat
gatccgcctcgttctgatctcttccttttccctgatgagagtggaaacctggggcaggaa
ccaagccccacttacccagtcctccactccccactcatctctcctcctgccccctcttta
ctccacgacgccgatgacttctgcatcctggacacgccgggatccagagtactggaaaag
gatgaggagcctgtggtaaagaagctgatctctgaacccatccttgtgagggaagaccat
ttctgtgtccctctggagggcagcagctctaacaggggtccgcttcacttccctgtgcca
gaaatcagatacctggtcaaagagatctctgtagtgtggcacctctatgggggaaaagac
tttggaggtggtgcgctgtcctcctcaccagctcgcagtcgagggtgcactcctcacagc
tctccatcacagactcccgtaaaacaggtgagaagaggctcccgtgctggaggaggatgg
ggcagaaaccctgatgttctgatggagattcaactcagtaaggtgcggttccagcatgag
gtgtatccccaggctgcagagacgggtgttttgacggagcagccggtgtccagacaggtg
ttttcagtgcaggatctggagatacgagacaggctggcctcttccatgatgaacaagttc
ctctatctgtactccagtaaagaaatgcccaggaaagctcactcaaacatgttgactgtc
agagccctgcacgtgtgtccagaagctggacaggcgcctcaggagtgctgtctacgggtg
tcactaatgcccctccggctaaatatcgatcaggatgcattattcttcatgaaggacttc
ttctccagtctggcagctgaagttgaactgttctccccaccagagcaggaagcgttctgt
gtgtcagtgaagaagcctcctgtacctgaggtttcttgcaatttttccaagtacaacggt
gcagcgggccaagaccctgcgcccatcatctcagtgccaacccaaagccgcgccagtcca
agcctcctccgctccagcagccaagacagcactgctgagacggacaccgcctccacgtct
ttcaccgaccagcccatattcttcagagagttcagattcacttcagaggtgccaattcga
ttagactaccacggaaaacacatggcaatggaacagggcacatttgctggtattgtgatt
gggctgactcagctgaactgctcagagcttaaattaaggcgtctgtgctacagacaagga
ttactgggtgttgataagctcttttcatatgccatcaatgagtggttgaatgacataaag
aagaaccagttgccggggcttttgggaggcgtagggcccattcattccctggtgcagcta
gttcagggttttagggatctggtttggctgcccattgagcagtacagaaaagacggaaga
atagtgcgtggctttcagcgggggacggcctcgttcgggacctccaccgcgatggcagct
ctggagctcaccaatcggatggtgcggacaatacaggctgctgctgaaactgcttacgac
atggtttctccagtgccggatgagaaagaatgcaaaaagattaagcggtactcacattac
tgtctggcccatcagcctgtggacctgagagaaggggtggccaaggcatacagcgtggta
aaagagggcattacagacacagccctgaccatttatgacactgcgacacgcgagcatgag
cagaggggcatgacgggcgctgtgggcggagtcctgcgacagcttcctccggctgttgtt
aaacctcttatcgttgccacagaagcaacgtccaacgtgctgggcggcatgaggaaccag
atccacccagatgcacgtcaagaagagtctcagaaatggcgcttgggggaagaatga
DBGET
integrated database retrieval system
