Puntigrus tetrazona (Sumatra barb): 122362231
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Entry
122362231 CDS
T08985
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122362231 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122362231 (gtf2b)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
122362231 (gtf2b)
Prokaryotic type
Archaeal type
TFB
122362231 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
122362231
NCBI-ProteinID:
XP_043119520
LinkDB
All DBs
Position
2:10114573..10119939
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AA seq
316 aa
AA seq
DB search
MASTSRGDSLPKVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNSKYQNRRTMSSSDRAMLNAFKE
ISTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgtggagactctcttcccaaggtgcaatgccccaatcaccctgat
gcaatattggtggaggactacagggcaggagacatgatctgtcctgaatgtggccttgta
gtaggtgaccgtgtaattgatgtcgggtcagagtggagaacgttcaccaatgagaaggca
actaaagacccgtctcgtgttggtgatgctcagaaccctctcctcaatggaggagacctc
accaccatgatcagcaaaggaacaggtgcagcaagctttgatgagtttggaaactccaaa
taccagaatcggagaaccatgagcagctccgatcgagccatgttgaatgccttcaaggag
atcagcaccatggccgacaggatcaacctccccagaaacatcatcgaccgaacgaacaac
ttgttcaaacaggtttacgaacagaagagtctgaaaggcagaagtaatgatgcgattgct
tcggcctgcctttacatagcctgcagacaggagggtgtccccagaacatttaaagaaata
tgtgccgtgtctcggatctcgaagaaggagattggccgctgcttcaagcttattctgaag
gctcttgagacgagcgtggacctcattacaaccggcgacttcatgtcacgtttctgctcc
aacttgggcttgcccaaacaggtgcagatggcggccacttacatcgccaggaaggccgtc
gagctggacttggttccaggccgcagcccgatctcagtggcagctgcagccatttatatg
gcctctcaagcgtctgctgagaaaaagacacagaaggagatcggggacatcgctggagtg
gcagacgtcaccatccgtcagtcctaccgtcttatttatccccgcgccgccgatctcttt
cctccagacttcaagttcgacacaccagtggataaactgcctcaactgtga
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