Puntigrus tetrazona (Sumatra barb): 122362283
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Entry
122362283 CDS
T08985
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122362283
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122362283
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
122362283
NCBI-ProteinID:
XP_043119625
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All DBs
Position
17:2182974..2455298
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AA seq
977 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNVQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSAVA
SEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESNSPSLLSPDNTLER
SFFVRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQIMGMVVVAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENSKSDGKGNQSSENSEDPESDSKKQ
TGRPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDHKEGRLGGLHIKVERYGDGEVE
ELQDSPSSCSSEEEEDEVEDIVKDCNSGGELSGPAMSKHQKRKKRRKKQKWDGSRQRLRL
SPSAAASPSPGSLDPTLGDQPPLLLPPSPTSSSVLKIKTEMSEPINFDNDSSIWNYPPNR
EISRNESPYSMTKPHDTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFNGNSSSGNN
NSAPTSVSSATPGSLVPPSSSTTVDPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEALQR
LQAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNLLPNAHTSVNFV
DGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVSGAGLTQMPAANVFTTAEGLFSTLPFP
VYSNGIHNTQTLERKED
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggagggatgccggctgcgtccagagtcccgggagctactaacgggaacccg
caaaacgtccagggcttgacgtcttaccaacaaagcgagccatactgggagaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctaaggaaggagaagtcacgtgacgccgctcgctcg
cgccgggggaaggaaaacttcgagttctacgagctggcaaagatgcttccgctccccggc
gccatcaccagccagctggacaaggcctccatcatccgcctcaccatcagctaccttaag
atgagggacttcgccaaccagggagacccgccgtggaacctgcgcatcgaaggaccgcca
cccaacacctcagtcaaagctatcgggtcccagcggaggcggagccccagcgccgttgcc
tcggagatctttgagcctcaccttggcagccacatcctgcagtccctggatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacggtgtccatatacctg
gggctttcacaggtggagctgacgggcagcagtgtgtttgattacgttcatccgggcgat
catgtggagatggccgagcagctgggcatgaagcttccgccgggcagagggctgctgtct
cagggcggcggggccgaggacggggccagctctgcctcttcttcctctcactctgagaca
cctgagccagtggagtcgaacagccccagtcttctgtcaccggataacactctagaacgt
tctttcttcgtccgtatgaaatccacgctcactaaaagaggcgtccacatcaagtcctct
ggatacaaggttatccacattaccggcaggctgcggataagaatggcattaacacacagt
cgttcggtacccaatcaaatcatgggcatggttgtggtggcacacgcacttcctccacca
accatcaatgaggttcggatcgactgccagatgtttgttacacgggtcaacatggatctc
aacatcgtatactgtgaaaacagaatcagtgactacatggacctgacacctgtcgacatc
gtagggaagagatgttatcacttcattcacgcagaggacgtggaaggcattcggcaaagc
catttagacctgatgaataaaggtcagtgtgtgacaaagtattaccgctggattcagaaa
aatggaggttatatctggatccagtccagtgccactattgcaatcaacgccaagaacgcc
aacgaaaaaaacatcatctgggtcaactatgtgctcagtaatccagagtacaaagacaca
cccatggatatcgcacagctgcctaatctgccagagaaggcatcagagtcttcagaaaca
tcagattctgaatctgactccaaggagaactcagaagacaacgaaaactccaagtcagat
ggaaagggcaatcagtcttccgagaacagtgaagatccagagtcagacagtaagaaacag
acgggccggccaccagagcaagagatgagacgacaagaggaaggagacagttccagcaat
ccagaaagtcaggacagtgatgatagtctggaaccttctgactgtgaaaccgaccacaag
gagggccgcctgggtggtttgcacataaaggtggagcgctatggtgacggtgaggtggag
gaattgcaggactcgccctcctcttgctcttcagaagaagaagaggatgaggtggaagat
attgtaaaggactgcaacagtggaggagagctgagcgggccagcaatgagtaaacaccag
aagagaaagaagaggagaaaaaagcagaaatgggatggtagtcggcaacgtctgcgtctg
tctccctcggccgctgcttcccccagtcctggcagcctagaccccacccttggagaccag
cctcccctcctgcttccaccctccccaaccagttcctctgtgctgaagatcaagaccgag
atgtcagaacctataaacttcgacaacgacagcagcatctggaactacccacccaacaga
gagatctcccgtaacgaatccccctacagtatgacaaaacctcacgacaccttcccttct
cccccgcctgccggcctgcaggtgtccatcccggactccgtcctcactccacctggtgcc
gagggtggaggaggcagcagaaagcccaacttcaatggcaacagtagcagcggcaacaat
aacagtgcccccacctctgtgtccagcgcaactccgggcagcttggttcctccttccagt
tccaccaccgttgacccgctctccccacctctctcggcctcgccacgggacaagcagcag
ggtacacccacctcctctggctccctgctctacaccagtgacctggaagccctgcagagg
ttacaagcggggaacgtggtacttccattggtgcacagagtcacaggcacgcttgctgcc
acgagcacggcttccccgagagtctacaccactggaacgatccgatatgcccctgcagac
gtcagcctggccatgcagggcaacctcctgcctaatgcccacacctctgtgaactttgtg
gatgggcctggctttggcatagaccccaagacgcccatggagatgctataccatcatgtg
caccggctcaacatgtctaccccctttgggggtgcagtcagcggagccggcctcactcag
atgccagctgctaatgtcttcaccacagccgagggacttttctctacgcttccatttcct
gtctacagcaatggcatccataacacacagactctggagcgcaaggaggattga
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