Puntigrus tetrazona (Sumatra barb): 122362458
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Entry
122362458 CDS
T08985
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122362458 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122362458 (nudt21)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
122362458 (nudt21)
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GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
122362458
NCBI-ProteinID:
XP_043119837
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Position
18:3381022..3383654
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AA seq
228 aa
AA seq
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MSVVPPNRSSTGWPRGVNQFGNKYISQPAKPLTLERTINLYPLTNYTFGTKEPLYEKDSS
VAARFQRMREEFEKIGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNPGEDEVE
GLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgtacctcctaatcgatcatctaccggttggcctcgtggagtaaatcagttc
ggcaataaatacattagccagccggctaaaccgctcaccctggagagaacaatcaatcta
taccctttaacaaactacaccttcggcacgaaggagccgctatatgagaaggacagctcg
gtagccgcacgctttcagcggatgcgggaagaatttgagaaaatcgggatgaggcggacg
gtggaaggggttctgatcgttcacgagcacagactccctcacgtgctgctgctgcagctg
gggaccaccttcttcaagcttcctgggggggagttgaaccctggagaggatgaggtggaa
gggttgaaacgactaatgactgagattttggggcgacaggatggagtgaaacaggactgg
gtcattgatgactgcattgggaactggtggagaccaaactttgaaccacctcagtaccct
tatattccagcacacatcactaagcctaaagaacataagaagctttttctagtccagctg
caagagaaagcattgtttgctgtgcctaagaactacaagcttgtggccgcccccttgttt
gagctttatgataatgctcctggctatggcccaattatatccagtcttccacagctactg
agcaggtttaacttcatctacaactga
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