Puntigrus tetrazona (Sumatra barb): 122362525
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Entry
122362525 CDS
T08985
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4-like isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122362525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
122362525
Domain-containing proteins not elsewhere classified [BR:
ptet04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
122362525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
ADAMTS_CR_3
PLAC
TSP1_spondin
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
122362525
NCBI-ProteinID:
XP_043119947
LinkDB
All DBs
Position
18:complement(16730644..16758546)
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AA seq
807 aa
AA seq
DB search
MCHQTTRPIRSGSEAAAWSSWGSWAECSLSCGGGVQEQTRVCLSRRATLQNTPEHRHLRR
SNSSRVGPGMYGYGRMPYTTPLLKDRQRRSASDIPKQSYRTHQRNPSRPYSPLPNSSCPG
APNQYKICNTMACPSPSRPIRELQCSRFNTQLFMGRLYQWEPFNDVSSGPRCELNCRAVG
FRFYVRQADRVIDGTPCGPKRTSVCVAGRCQSAGCDDLLGSGKVPDKCGVCGGDNSACKL
VSGLFQHSLSKVGYHKIVEIPAGATKINVTEMVKSRNYLALLSRSGRSIINGNWAINRPG
MYEGVGTMFTYRRPNEISSTAGESFLAEGPTNEILDVFMIYQQPNPGVHYEFVMPSENAV
EAPRNAVNGPAVSDADGRLTPEDHKRPGVIYPPPVLNNQLPAAPPPTGAKEYNWKLSGST
DCSASCGRGHRSTVFVCVHRVTRAHVSSGLCDGNTKPSPQEEPCNVQPCPAFWDIGEWSE
CSKSCGLGVQYRQVLCRQSYSNRTLSVPSSLCRQTERPETSSSCQLKICSEWQIRSDWSP
CSVPCGVGQRSREVHCVSNVGDIVADEECNMKLRPSDVENCDAGVCTRSWFFSDWSSQCS
AECGMGVRTRSVQCLNNHISSLPLERCGTQRPPEAQPCNNGPCESRTEWFAGPWSQCSVE
CGSGSQQRSVVCLMRSDEGFSVMPSYECSSLDKPLGQQSCFLKACGAKWLYTDWSACSKT
CETGFRVREVRCLTDDMMTSDRCEDTLKPHDKEECHPEPCLPLIDEKCRDKYFNCNVVVQ
ARLCVYDYYQMACCASCTRVAQRRTRS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcatcagacaacaagaccgatccggtccggctctgaagcagcggcgtggagctcg
tggggttcgtgggctgaatgttctctctcctgcggcggaggagttcaggaacagaccaga
gtctgtctgtcacgcagagccacgctgcagaacacgcctgagcacagacacctgaggaga
tcgaacagcagccgcgtcggtccggggatgtacggatacggcaggatgccatacacgacg
cctctgctgaaagacagacagagacgatcagcatcagacatcccaaaacagagctacagg
actcatcagaggaatccgagccgaccttacagtccattaccaaacagctcctgccccgga
gccccgaatcagtacaagatctgcaacaccatggcctgtccgtcgcccagcagaccaatc
agagagctgcagtgctccagattcaacacacagctcttcatgggccgactctatcagtgg
gaacctttcaatgacgtgtccagcggtccgcgctgtgagctcaactgccgggccgtgggc
tttcgcttctacgtgcgtcaggcggacagggtcatcgacggcaccccgtgtggaccgaag
cggacgtctgtgtgtgtggccggacgctgtcagagcgccggctgtgatgatctcctgggt
tctgggaaggttcctgataagtgtggtgtgtgtggaggggataacagtgcgtgtaagctc
gtctccggcctgttccagcacagtctgtccaaagtgggctatcacaagattgtggagatc
ccggcgggagccaccaagatcaacgtcaccgagatggtgaagagcaggaactacctggcc
ctgctcagccggtctgggcgatccattattaatggaaactgggccatcaaccgtccagga
atgtatgagggagtgggaacgatgttcacgtaccggcggcccaatgagatcagcagcacc
gcaggagagtccttcctggccgaggggcccaccaacgagatcctggacgtgtttatgatc
taccagcagcccaatccaggagtccattatgagttcgtcatgccgtcggagaacgctgta
gaagctccacggaacgctgtgaacggtccggctgtttctgatgctgacggacggctgacc
ccggaggatcataagagaccaggggtcatataccctcctcctgtcctgaataatcagctt
cctgcagctccgcctccaaccggagccaaagaatataactggaagctgagcggctccaca
gactgcagcgcctcctgtggacgaggtcataggtccaccgtgttcgtgtgtgttcaccga
gtcactcgcgctcatgtctccagcggtctgtgtgacggcaacactaaacccagtcctcag
gaggagccgtgtaacgtccagccctgcccggccttctgggacatcggcgagtggtctgag
tgcagtaagtcgtgtggtctgggagtacagtatcgtcaggttctgtgtcgtcagtcgtac
agtaaccggactctgagtgttcccagcagtctctgtcggcagacggagcgtcccgagacc
agcagctcctgtcagctgaagatctgcagcgagtggcagatccgctccgactggagcccc
tgttcggtgccctgcggtgtgggtcaaaggtcacgggaggtgcactgtgtgagtaatgtg
ggtgatatcgtggctgatgaagagtgtaacatgaagctgcgcccgagtgacgtggagaac
tgtgatgcaggtgtgtgtaccaggagctggttcttcagtgactggagctctcagtgctcg
gcggagtgtggcatgggtgtgaggacacgcagcgttcaatgcctcaacaatcacatcagc
agcctgcccctggagcgctgcgggacccaacggccccccgaggcccagccctgcaacaac
ggcccctgtgagagccgcaccgagtggttcgctgggccctggagtcagtgttcggtggag
tgtggttcagggagtcagcagaggtcagtggtgtgtctgatgaggtctgacgagggtttc
tctgtgatgccgtcgtatgaatgctcgtctctggacaaacctctcggtcagcagagctgt
ttcctcaaagcctgtggagctaagtggttatacaccgactggagcgcgtgctcaaagacg
tgtgagacgggcttccgtgttcgagaagtgcgctgtctgactgatgacatgatgaccagt
gaccgctgcgaggacacactgaagcctcacgacaaggaggagtgtcaccccgagccctgc
ctgcctctgattgatgagaagtgtcgtgataaatacttcaactgtaacgtggtggtgcag
gcgcgtctctgcgtgtatgattactatcagatggcgtgttgtgcgtcgtgcacgcgtgtg
gctcagaggagaacacgctcctga
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