Puntigrus tetrazona (Sumatra barb): 122362551
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Entry
122362551 CDS
T08985
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122362551 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122362551 (snrpa)
Spliceosome [BR:
ptet03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
122362551 (snrpa)
Complex B
122362551 (snrpa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Psu
Motif
Other DBs
NCBI-GeneID:
122362551
NCBI-ProteinID:
XP_043120003
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All DBs
Position
18:complement(443721..446581)
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AA seq
280 aa
AA seq
DB search
MTNQEMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSPTLKMRGQAFVIFK
EINSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKAPEGGA
GKKASAAAAGMAGVPAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMAPGQMPPGA
MPPGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPG
RHDIAFVEFDNEVQAGAAREALQGFKITQSNAMKISFAKK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccaggagatgcggctaaatcacactatttacatcaacaacttaaatgaaaag
attaaaaaagatgaactgaagaagtcgttgtatgctatattctcccagtttggacaaatt
ctggacatccttgtttctcctacattgaaaatgaggggtcaggcatttgtgattttcaag
gagatcaacagtgcttccaacgcgctgcgctccatgcaaggcttcccattttatgataaa
cctatgcgtattcaatatgcaaagcaggactccgatatcattgccaaaatgaaaggcact
tacgtggagcgagaccgtaagaaagagaagaaaaagcccaaagcccctgaaggaggcgct
gggaaaaaggcttctgctgccgcagctggcatggccggagtacctgcagcgatgcccgga
atgccgcccatgagccaagcccctcgcatgatgccgatgcctggccagcctccctacatg
cctccgcctggtatgatgcctcctcctggcatggcacccgggcagatgcctccaggtgcc
atgcctccaggtcagatgatgccaggacaaatgcctggccagatgccgcagcaggtgtca
gaaaaccctcccaaccacatcctgtttctcaccaatctcccagaggagacgaacgagctc
atgctgtctatgctgttcaaccagtttcctgggttcaaagaagtgcgtcttgtcccgggt
cgccacgacatcgcctttgtggagtttgataacgaggtgcaggcgggtgcagccagagag
gctctgcaaggcttcaagatcacacagagcaatgcaatgaaaatctcatttgcaaagaag
taa
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