Puntigrus tetrazona (Sumatra barb): 122362666
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Entry
122362666 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122362666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptet03021
]
122362666
03036 Chromosome and associated proteins [BR:
ptet03036
]
122362666
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122362666
Coactivators
SAGA/TFTC/STAGA complex
122362666
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122362666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122362666
NCBI-ProteinID:
XP_043120143
LinkDB
All DBs
Position
18:17983478..18070581
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AA seq
887 aa
AA seq
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MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGESEPPAARQSSAKQQQQQQQTGGTAQ
LPAPVDSPSEPQQQAQQQNARKAARNPDPDPKDASMDKHAKALEKESPLKTHGGSIIIIT
TAAAAAAASDAPAPGNKGESPRDTRKKHPGNTRTLRSAASHSLNGNGGGAASASASSPST
SGTTFTVSSNPQAIALDRGTPTIALHRLPRHIIASIAQNGNGTSVSALVQQGARINHSKT
PADGNAKPAAASPVTAAPVKAAVSAAAVIRPAQTPTQAAAQQRVVTPQLIVRPPQQQTTI
QLPPGFTIPPGMVLVRTEMGQLVMVPQQALAQAQAQNSISPRPSTPTSVATFRVTTPQSP
VSAQAIRPAPAAQTKLVQSSSPSSTAQTSSSTCPAKAPVAAAVAVTAPQQVQPALGPQGP
LTQMPLAPQSAAAPAPGGPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALV
QDLLDAKIDPEEFTSRLQSELKSSPQPYLVPFLKKSLPALRLSLLNSQQSLTQPLQPNKT
SVTPVQTPVSVRPHQPNSTTVLPQGIKRAVGPGSQIRMPVVITQTVRATGALGKPSAIQT
GKSPAGVTIQLSGNQKNKLNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSDLVG
TQIRSCKDEAFLPAGLLHRRILETAKRFGVTDVPLEAVNFISHATQSRLRTVLEKVSSIA
QHRMDSCKEDEWYEQSSDVRSQLKFFEQLERMEKQRKDEREREILLRAAKSRSRQEDPEQ
ARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDSPGATTTGTEVSGSSAGSPG
GSSAPSSSSRQYNRQRITRVNLRDFIFYMEQERETSRSLLLYRALLK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagcc
gtgagcgatctggtgggctcgctggagtctcagctggtgggcgagagcgagccgcccgcc
gcgcgccagagcagcgcgaagcagcagcagcagcagcagcagacaggaggaaccgcgcag
ctgcccgctcctgtagactctccatcagaaccacaacaacaagcgcagcagcagaacgcg
cggaaagcggcgcgcaacccggatcctgacccgaaagacgccagcatggacaagcacgcc
aaagccctggagaaggagagccccctgaagacgcacggcggcagcatcatcatcatcacc
acggcggcggcggcggcggcagcatccgacgctcctgcaccgggcaacaaaggtgagagc
ccgagggacacccgcaagaaacacccggggaatacgcgcacgctgcgctccgcggcgtcc
cacagtctgaacggcaacggaggcggcgcggcgtcggcgtcggcatcatcccccagcacc
tccggcacgactttcaccgtgtccagcaacccgcaggcgatcgcgctggaccgcgggacg
cccaccatcgcgctgcaccggctcccgcgtcacatcatcgccagcatcgcgcagaacggg
aacggcacgtcggtgtccgcgctggtccagcagggcgcgcggatcaaccacagcaaaaca
cccgcggacggcaacgcgaagccagcggcggccagcccggtcacggcggcgcctgtcaaa
gccgctgtcagcgcggccgcggtcatcagacctgcgcagaccccgacgcaggcggctgcg
cagcagagggtcgtaacgccgcagctgatcgtcagaccgccgcagcagcaaaccactata
cagctgcctcccggcttcaccatcccaccaggtatggtgctggtccggacagagatgggt
cagctggtgatggttcctcagcaggctctggctcaagctcaagctcagaacagcatctct
cctcggccctccacgcccaccagcgtggccacgttcagggtcacgaccccacagtctcct
gttagcgctcaggcgattcgtcctgctccagccgctcaaactaaactggtccagtctagt
tcaccgagctccacggcccagaccagcagctcaacctgccccgctaaggcccccgtggca
gccgccgtggcagtgacagctccccagcaggtccagccggccttgggcccccaggggccc
ctcactcagatgccactggccccgcagagcgcagccgccccggcccccggaggtccggtc
gtctcccaggagatgcaggagaacgtgaagaagtgcaagaacttcttggcgacgttgatc
aagctggcgtcccataactccccgtccccggagacgtctcgaaacgtcaaagcgctggtg
caggatttactggacgccaagatcgatccggaggagttcaccagccgcctgcagtcggag
ctgaagtcgtctcctcagccgtacctggtccctttcctgaagaaaagtctccccgcgttg
cgtctgtctcttctgaacagccagcagtctctcactcagcctctgcagcccaacaagacg
agcgtgacgccggtccagacgccggtcagtgtgcgtccgcaccagcccaacagcaccacc
gtactgccacaaggtatcaagagggcagtggggcctggaagtcagatacggatgcctgtg
gttataacgcagacggtgcgagcgacgggtgctttagggaagccctcggcgatccagacg
ggcaaaagccccgcgggcgtaaccatccagctctcaggaaaccagaaaaacaagctgaat
gacccgggaggaggctcgttcagagacgacgacgacatcaacgatgttgcgtctatggcc
ggtgtgaacctcaacgaggagagcgcgcgcattctagcgaccaactccgatctggtggga
acgcagatccgctcgtgtaaagacgaggccttcctccccgcgggcctgttgcaccggcgt
attctggaaacagcgaagaggtttggagtgacggacgtaccgctggaggctgtgaacttc
atctctcacgccacccagtccagattacgaacagtgctggagaaagtctcctccatcgcc
cagcatcgtatggactcgtgtaaggaagacgagtggtacgagcagtcgtctgatgtgcgc
tcacagctcaagttttttgagcagctggaacggatggaaaagcagaggaaagatgagcga
gaacgagagattctcctcagagcggcgaagagtcgctcgcggcaagaagatccagaacaa
gcccgtctgaagcagaaagcaaaggagatgcagcagcaggaactcgcccaaatgagacaa
cgagacgctaacctgacggcgctcgccgccatcggccctcggaaaaaacgcaaagtggac
tcgccaggagcaaccacgacaggcactgaggtgtcggggagttcggcaggttctccgggc
ggatcgtcggccccgtccagctcgtcacggcagtacaaccgccagagaataacacgcgtc
aacctcagggacttcatcttctacatggagcaggagagagagaccagcagatctctcctg
ctgtaccgcgctctcctgaagtag
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