Puntigrus tetrazona (Sumatra barb): 122362678
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Entry
122362678 CDS
T08985
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122362678 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122362678 (dhx36)
03012 Translation factors [BR:
ptet03012
]
122362678 (dhx36)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122362678 (dhx36)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
122362678 (dhx36)
Translation factors [BR:
ptet03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
122362678 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_14
ATPase
AAA_19
NB-ARC
Motif
Other DBs
NCBI-GeneID:
122362678
NCBI-ProteinID:
XP_043120160
LinkDB
All DBs
Position
18:6737075..6759776
Genome browser
AA seq
1026 aa
AA seq
DB search
MNHGSGNRRGRRGGGRRFGDGGSRWDGGAGSSGGGGYARSSEWDSREEQGHGGGRRGRGG
GGGGGRGKHPPHLKGREIGLWYAKWGGIKRSEAERKSRAVVQMDEQREQHITQLLNSVQR
DAGKDTHPSTSQSWMVKQEPSGHSYFDGDDPPEPQNIVKMPKVEPKEEKRENKYESGASV
KEELKDADLEYLFQDVVRIPSLDEELKKDLKRKNDNARYLDMLKFREKLPSYGMREELVS
LIGANQVLVISGETGCGKTTQVTQFILDDFIERGMGSLCRVVCTQPRRISAISVAERVAA
ERAESVGDGKSCGYQIRLQSRLPRKQGSVLYCTTGIILQWLRSDPFLSSVSHLVLDEIHE
RSLQSDVLLTIVKDLLTAREDLKVVLMSATLNAEKFSKYFNNCSMVHIPGYTYPVKEHLL
EDVVELLRFKPQHQDRRPRYRRGFMHGQNVRPEKEQKEAEYRESWPCFARTLRERYSDST
VDALEMMDDDDKINLELIVALIRHIVMKEDDGAILVFLPGWDNISTLNDLLMADPMFKSD
RFIIIPLHSLMPTVSQTQVFKKPPPGVCKIVIATNIAETSITIDDVVYVIDGGKIKETHF
DTQNNIRTMTAEWVSLANAKQRKGRAGRVSPGNCYHLYNGLRASLLDNYQLPEIQRTPLE
ELCLQIKILKLGSIASFLRKTMDPPSDKAIELAITHLVDLNALDRNEELTPLGFHLARMP
VEPHIGKMILFGALLGCLDPVLTIAASLSFKDPFFIPLGKEKIADHRRKTLSQNSRSDHL
AIVNAFWGWEDSKKQGSRFEKEYCWENFLSANTLQMLNNMKGQFAEHLLTAGFVKSKDPK
DPSPNINSENEKLIKAVIVAGLYPKVAKIRPSHSKKRPMPVKVYTKADGKVCIHPKSVNA
EETQFHYTWLIYHLKMKTTSIFLYDCTEVSPFSLLFFGGDISIQRDQDQETIAVDEWIVF
QSPGRIAHLVKDLRKELDVLLEDKIKSPRPVVWNDRKSKDCAVLSAIIDLITTEETPAGG
PRRGSQ
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgaatcatgggtctggtaatagacgtggtcggagaggagggggtcggcggttcggagac
ggaggttccaggtgggatggaggggctggatccagcgggggtggaggatacgcgaggagc
tccgagtgggactcaagggaagagcagggacatggagggggacgaagaggaagaggaggt
ggaggtggaggtggaagaggcaaacacccaccccatttaaagggtcgagaaataggactg
tggtatgccaaatggggtggaatcaaaagatctgaagcagaaaggaaatctagggctgtt
gttcagatggatgaacaacgagagcagcacattactcagctgctgaactctgtccagaga
gatgcgggtaaagacacgcacccctccacatctcagagctggatggtgaagcaggaaccc
agtggccacagttactttgatggagatgatcctccagaacctcaaaacattgtaaaaatg
ccaaaggttgagccaaaagaggagaaacgagagaataagtatgagtcgggagcgagcgtg
aaagaggaacttaaagacgctgacctggagtacttattccaagatgtcgtgcggataccc
tctcttgacgaggaactcaaaaaagatctgaagaggaaaaacgataacgctagatacctc
gatatgctgaaattcagagagaagctgccttcctatgggatgagagaggagctggttagc
ctaatcggagctaaccaagtactggtaatcagtggagagaccggctgtgggaagaccacc
caggttactcaattcatccttgatgatttcattgagaggggcatgggttctctctgcagg
gttgtttgcacacagccaaggcgtatcagcgccatatctgttgcagagagggtggctgca
gaacgtgcagagtctgtgggagacgggaagtcctgtgggtatcagatccgtctgcagagt
cggttaccacggaaacaaggctcagtgttgtattgtactacaggcattattcttcagtgg
ctccgctcagatccctttctttcaagcgtaagtcatctggtactggatgaaattcacgag
aggagtcttcagtctgacgttcttctcaccatcgtgaaggacttgttaactgctcgagag
gacctgaaagtggtcctaatgagtgccactcttaatgctgagaaatttagcaagtatttc
aataattgttccatggtccatattcctggatacacatacccagtaaaagagcacttgctg
gaggatgtggtggaattgcttaggttcaagccgcaacatcaggaccgcagacctcgctat
aggagaggatttatgcacgggcagaatgtgcgaccagagaaagaacagaaggaggccgaa
taccgtgagagctggccctgcttcgcccgtacgctcagagaacggtactcagacagcacc
gttgatgcgctggagatgatggacgatgatgacaagatcaatctggagcttatcgtagca
ttgatcagacacattgtgatgaaagaggatgatggagcaattctagtgtttcttcctgga
tgggacaacatcagcaccctgaatgaccttctcatggctgacccgatgtttaagtcagat
cggttcatcatcatccccctccactctttaatgcccacggtgtctcagactcaggtgttc
aaaaagccgcccccgggggtgtgcaagatcgtgatcgctaccaacatcgcagaaaccagt
atcacaatagacgatgtcgtgtatgtgatagacggagggaagattaaagaaactcatttt
gacacccagaacaatatcaggaccatgacagcggagtgggtgagcttagccaatgccaaa
cagaggaaaggccgcgctggcagagtgtctcctggcaattgctatcacctgtataatgga
ctaagggccagtctcctggataactaccagttgcctgagatccaacgcactccactggaa
gagctttgcttgcaaataaagatactgaagttgggatccattgcttctttcctgcgaaag
actatggaccccccatcagacaaagcgatagagctggccattacacacctggtggacctg
aatgctctagaccggaatgaagagttaactccattaggattccatcttgcccggatgcct
gtggagcctcacataggaaaaatgattctgttcggggctctcctgggctgtttggaccct
gtgcttaccattgcagccagccttagctttaaagatcccttcttcataccgctggggaag
gagaagattgcagaccacaggaggaaaacgctctcccaaaactctagaagtgaccatctc
gccattgtcaatgcattttggggctgggaggattctaagaaacagggcagcaggtttgag
aaggaatactgctgggaaaatttcctttctgccaacacgctacagatgctgaataatatg
aagggtcagtttgcggagcatcttttgacagctggctttgtgaagagtaaggatcctaaa
gatcccagccctaacatcaactcggagaatgagaagctgatcaaggctgtgatcgttgct
ggtttgtaccctaaagtggccaagattcgtcccagccacagtaagaaaagaccaatgcca
gtgaaggtgtacaccaaggctgatgggaaagtttgtatccaccctaaatccgtcaatgca
gaggaaactcagttccactacacatggctcatttatcacctgaagatgaagaccaccagc
atcttcctctatgactgcacagaagtgtctccattttcactgttattttttggaggagat
atctccatccagagggaccaggaccaagagacgattgcggtggacgagtggatcgtgttt
cagtcccccggacgcattgctcaccttgtcaaggacctgaggaaggagctggacgtgtta
cttgaggacaaaataaagagtccacgtcctgtggtctggaatgaccgaaagtctaaagat
tgtgctgttctgtccgctataatcgacctcatcacaacagaggaaacccctgctggaggc
cccaggagaggcagccagtga
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integrated database retrieval system
