Puntigrus tetrazona (Sumatra barb): 122362683
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Entry
122362683 CDS
T08985
Symbol
carmil2
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 2 isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122362683 (carmil2)
Membrane trafficking [BR:
ptet04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
122362683 (carmil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
DUF3915
Spectrin_5
Motif
Other DBs
NCBI-GeneID:
122362683
NCBI-ProteinID:
XP_043120166
LinkDB
All DBs
Position
18:complement(3517324..3551679)
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AA seq
1667 aa
AA seq
DB search
MAAQTEVPFCLKECITQYLKPQRVQFMSLVQLNQYKGRAESRVLVMSQWRAHVFHSKQPV
KVESSFSYLEIYAITIDSIEQVVIETDRQVYYLSLMSVRDLEAVVSHVTASLKKIFPDSS
PGKLLKKVPPDLQEQLCSLASRVEEHVNGAVGPCGGFSDTYAALCDFNEFPCCMEVQWDV
DNIYHVQNCRVFNLIDFSHLDSRDLALAVGALSFNQWFTKIFSKDFKLTPDVQEQVLYMI
ARSCALEEVSLEASGLKIDFAVKMASAFRDSSTSAVHVINLSVNAIEDKGVIALSQSLGK
LTRGLSQLYLSKVSMSPKGLGCLVQVLHQSTFLCNTLTHLDLSGNIGCLATEEAVSLFKF
LSAPNAVSHLDLSCTDCPLDTLFVSLSACCFTTLSYLNLSRNTFSHRKVREVTRSVRDFF
SKSTVLKYVGLAGTKLPPEALRLLLQGLATNTHLSELELDISCCELRSAGAQVIQEHIFE
AKAICSLDLSDNGFESNMVTLILSIGRSHSIRHLSIGRNFAMKSRALTDVLQRLVQLIQE
EECPLESLSVCDSKLKTGTTILINSLASNASLSKIDISGNCIGDTGAKMLAKALMINTKL
KTLVWDRNNVSAGGFMDVANAMERNVTLQNMSIPMSDILQAYRNTPEKMEEALQKIQTFL
HRNNQRHCRTGEDLCHLQHGLKTTRSEQLVQDLCKKLQDSVHPLTCYNIQEVQSDILIAE
EALQHAKTAISSFAGLYELGRAPSSGHMLKCILNDSATALRSEITEEIQELATAMLQSAQ
LTCPRVVQRSSVNEHLAECVAKKTRQAAHFIQNTMQETENSIRNKLSELKLSVSVSLVES
IIHEVLQDLSVAQEKLDKHMREFSQSTNIKANVPQLRVMEHEFPTDDYVPVNWRNSFHSC
SIRPAPSIKSLLDVEGEQQARAATHPQQEVEERGGGGTQVSRVGMEERRRALSLSLATGL
SVSAAGQLKPGSPSYSGREADAAAAPAAAAAAALSNREPRRSEPAPPQPPMDLPIEGHTL
RHYTRSRPRPNRRNRQPPSKPQEQAAESENEANENMGRVDEGVEEFFTKKIIPDDPLKHQ
REEPLIKAQPAEPTSVTTAPPTTSTTTPIPTTAPSKNIKKKFGDFFAFKKVRAGRGAKGD
GVPEGKVKKTSIADLIRPLREAARAEKEREKEREREKEREREKEKEKERDKEKLDEENVV
KPATTTATTTILTITDSTTNAPVIEDKMSPRAPSPAPTPVLTPPASTPTPPASSPSKTEE
VPALSPAAPPTPTKTPSPVPVVSPSEREKSRTLEKSRTPDGERRPKPIRRSLREGKSQSL
ILLSDVLPEQDGTATQVKKHASESSSSFEQRLHVMLHRMGVTKTSPTDTKQSQSKDEELR
KANSEGAILDKPEPPPTFMKPRTMSTSSDTRRPTRVTQSVTDFHRSEKPLLPERPIGPLP
PKPAMKPILFPGNEAARTATPSPKLPSPSQDGQAEVSETISLSQPQEKDPPTPSPRKETP
PAPSPRRILRTDIRERSERAQSVTEETLPIPRPRMKPSPQRRAVSVHEDSLLQHAAMLDP
EELKAALPKRQRSPGRKRVNLGELTPCSEDLPEGEEVKSGEKKDGTGQVDEANSTTVTDS
QSEQSPSELSEQVTNQEKGETVSEEHTTQGETSDQRTESPSPEIHMD
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcagacagaggtcccattttgcctaaaagaatgcataactcagtatctgaag
ccacagagggttcagttcatgagtttggtgcagctcaatcagtacaagggacgagcagag
agcagagttttggtgatgtctcagtggagagctcatgtgttccacagcaagcaaccagtg
aaggtggagagttccttcagttatctagagatctatgccatcactatcgacagcattgag
caggtggtaattgagacggacagacaggtctactatctcagcctgatgtcagtgcgagat
ctggaagctgtggtgagtcatgtcactgcctcactcaagaagatttttccggattcatcg
cccgggaagttgctgaagaaagttccccctgacctccaagagcagctatgcagtcttgcc
tctcgagttgaagaacatgtgaacggagcagttggaccatgtggaggcttttcggacact
tacgcagctttgtgtgacttcaatgagtttccttgctgtatggaggttcagtgggacgtc
gacaacatttaccatgttcagaactgtcgggtgttcaacctcattgacttcagtcattta
gacagcagagacttggcattagcagtgggtgctttgtccttcaaccaatggtttaccaag
atattcagcaaggacttcaaactgacccccgatgtgcaggagcaggttctctatatgatc
gcccgctcctgtgctctggaggaggtcagtctggaggctagcggacttaaaatagatttt
gcagtgaagatggccagcgcttttcgggacagttctacctctgctgtccatgtcatcaac
ctgtctgtcaatgcaattgaagataaaggtgtaattgctctcagtcagagtctgggcaaa
ctgacacgtggcctcagtcagctgtacctgtccaaggtctctatgtccccaaaaggcctg
ggctgtctggttcaagttcttcatcaaagtacatttctctgcaacactctcacccaccta
gacctgagcggaaacatcggctgcctggcgacagaagaggctgtgagcctctttaagttc
ctatctgctccaaatgcagtttctcacctggacctcagctgcacagattgccctctagac
acattgtttgtgtctctgtctgcgtgctgcttcactactctgagctacctcaacctctcc
aggaacactttttctcacagaaaagtacgagaggtcacacgcagtgtgagggatttcttc
agcaagagcactgtgttgaaatacgtgggactggctggaactaaactacctccagaagct
ctcagattgttactacagggcttggccaccaacactcatctatctgagctggagcttgac
atcagctgctgtgagctgaggtctgctggagctcaggtgattcaggaacacatctttgaa
gccaaggccatctgcagtctggacctgtctgacaatggttttgagagcaatatggttact
ttaattctctccattggtcgcagtcattccattcggcacctttcaattggacgcaatttt
gccatgaagtctagagcccttacagatgtgttacaacgccttgtacagctaattcaagag
gaggagtgtccactagagtctctctctgtgtgtgactcaaaactgaaaactggtaccacc
atcctcatcaacagcctggccagcaacgccagtctgtccaagattgatatcagtggaaac
tgtataggtgacacaggagcaaagatgctagcaaaggccctcatgatcaacaccaagcta
aaaacactggtttgggaccgaaacaatgtgtctgccggaggatttatggatgtggccaat
gccatggagagaaacgtgacactacagaacatgtccattccgatgagtgatattcttcaa
gcatatagaaacactccagagaagatggaggaggctttacagaaaatccagaccttttta
cacaggaacaatcagagacattgtagaacaggtgaggatttgtgccatctgcagcatgga
ctaaagaccactcgctctgaacagttagtgcaggatctctgtaagaaactacaggacagt
gtgcatcctttaacctgctacaatatacaagaagtgcagtcggacatcctgattgcagag
gaagcacttcaacatgcaaagacggccattagttctttcgcggggctttatgagttgggc
agagctccctctagtggccacatgctgaaatgcatcctcaatgattctgctacagccttg
aggagtgagatcacagaggaaatccaggagctggcgacggcaatgctgcagtccgcccag
ctgacctgccccagagtcgtccagaggtcgagtgtcaacgagcatctggcagaatgtgtg
gccaagaagacacgtcaagcggcacacttcattcaaaacacaatgcaagagacagagaac
agcatcaggaataagctcagtgaattgaaactgtctgtcagcgtctctttggtggaaagt
ataatacatgaagttcttcaggatttgtcagtggctcaggaaaaactggacaagcacatg
agggagttttcccagtccaccaatatcaaggccaatgttcctcagctcagagtgatggag
catgaattccctacagatgattatgtccctgtaaactggaggaacagcttccactcctgt
agcatccgtcccgccccttccatcaaaagtttgttagatgtggaaggggaacagcaggcg
cgtgcggccacacatccccagcaggaggtagaggagagaggagggggagggactcaggtc
tccagggtaggaatggaggagaggaggcgggccctgtcgttgtcattggccacggggctg
tcagtctcggcggcaggccagctgaagccaggaagcccctcctactcggggagagaggcg
gatgctgctgccgctcccgctgctgctgctgctgccgctcttagcaacagagagccccgg
cgctcggagcctgcacctcctcagccccctatggacctgcccatcgaaggacacacactg
aggcactacacccgctccaggcccagacccaaccgccggaacaggcagcctcccagcaag
ccgcaggagcaggcagctgagagcgagaatgaggccaatgaaaacatggggagggttgat
gaaggtgtagaagagttcttcaccaaaaaaatcatccccgatgaccccctaaagcaccag
agggaggagcccctcattaaagcacaacctgcagagcccacgtctgtcacaactgcccct
cctaccacctccactacaacccccatccctaccacagccccctccaaaaacattaagaag
aaatttggtgacttttttgcctttaagaaagtccgagcaggtcgaggggccaagggcgac
ggcgttcctgagggcaaggtcaaaaagacttcaatagcagatctcatccgaccactccgg
gaggcagcgcgtgcagagaaagagcgagaaaaagaaagggaaagagaaaaggagagggaa
cgagagaaggagaaagaaaaggagagggacaaagagaaactggatgaggaaaacgtagta
aagccagcaacaaccacggccaccaccaccatcctcaccatcacagattcaacaacaaat
gcaccagttattgaggacaaaatgtcacccagagctccttcacctgcccccacacctgtg
ctgaccccacctgcatccactcccacacctcctgcctcctctccgagcaaaaccgaagag
gtcccagcactgtcccctgctgcacctcccactcccaccaaaacccccagcccagtccca
gttgtgtcaccctcagagcgggagaagagccggaccctggagaagagccgcaccccagat
ggagagcggaggcccaaacccatccgccgctctctcagagagggcaaatcacagtccctc
atcctgctctcagacgtcttgccagagcaggacggcacagccacgcaagttaagaaacat
gcctcagagagctcatccagctttgaacagcgtctccatgtcatgcttcaccgcatggga
gtcaccaaaacatctcctactgacaccaaacagagccagagcaaggatgaggagctgagg
aaagccaactctgagggggcaatacttgacaaacctgaaccgccacctacatttatgaaa
ccccgcacaatgtccacctcatcagacaccaggcgaccgacccgagtgacccaaagtgtt
acagacttccaccgttcagaaaagcctctacttccagagcgtcctataggcccgttgccc
cctaaaccggccatgaagcccattctgtttcccggtaatgaggcagcacggacggccacg
cccagtcccaagctccccagcccctctcaggacggccaggcagaggtgtccgagaccatc
tctctctctcagcctcaggagaaagatcctccaaccccatctccccgcaaagagacgccc
ccagccccctcaccacggaggattctcagaacggatatcagagagcgttcagagagagca
caatccgtcactgaagagaccctccctataccacggccccgcatgaagccctctccccag
cgccgtgctgtgtctgtccatgaggactctctcctccaacacgccgccatgcttgaccct
gaggagctaaaggctgccctgccaaaacggcagaggtcaccggggcggaagcgagtaaac
ctgggagaactgacgccctgctcagaggatttaccagagggtgaggaagtgaaatctggg
gaaaagaaggacggcactggacaggtcgatgaggcgaatagcacaacagtcacagacagc
caatcagagcagagcccatctgagctcagcgagcaagtgaccaaccaggagaagggggaa
acagtctcagaggagcacacaacgcagggagaaacatcagaccaaagaactgaatccccc
tcacctgagatacacatggactga
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