Puntigrus tetrazona (Sumatra barb): 122362812
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Entry
122362812 CDS
T08985
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122362812 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122362812 (trip12)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122362812 (trip12)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
HECT type E3
122362812 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
122362812
NCBI-ProteinID:
XP_043120326
LinkDB
All DBs
Position
18:11098354..11134641
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AA seq
2096 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPLDHTLAGRLQPEQVNQKANSPPENRRSNSKASKAP
PSSAVGSARGHASRRNSLSLSVGSHSIPDPELEAAGTSGQQGRREGSSTRALKRSSASEP
NITFSPSPAKRPKAVSSHLLESSSSGPSAPTTSPEVTEPRKAPASVSTKSKKRRLAAEPA
PARALSKKSASYPGPSGASSTPSQKRKKAEASSLSSSSSSSLLSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSSASSSSSSSSSSSAATGANSCAPQGARLKQGK
DQSKARRSRSASSPSPRRSSRDKEQSKAASSSKFDWTSRFNSKVNLPKPKLSLPGSAKAE
TSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKR
GAAESRRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEM
GRLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAV
IEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAV
VVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHNKAILQAGGLAACLLYLEFFSINAQ
RNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEEN
LLQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETL
RFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTT
EGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTG
TARAIQRKPNPLANPNTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAG
PAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQ
KLPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTASLCTTTITTATTTAASNVT
PDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGKLGTQTNSSNSEPSRTAGVSGLARVPPKDSVSNNRDKIKAW
IKEQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQVDSGVECLEEISSIVSESD
VSSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFFGCPIPGQEPLGRLDPTEN
GPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCT
NVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNS
GSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIW
YKPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNPLESYLISD
PPEGITFDDPSMEVILLLRVLHSISRYWFYLYDNAACKEIIPTGEFINSKLTAKANRQLQ
DPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDS
QDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYAL
VSQELQRADLGLWRGEEVTLSNPKAGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMK
FRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSVSSHDLVNIDPGVAKSIQHLEDII
RQKKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIH
NLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHLQYFYPEELDQLLCGSKSESWDV
KTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPL
TIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccactagaccacacacttgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaattccccacctgaaaatagaagatctaattctaaggcttccaaagccccg
cccagctctgccgtcggctcggcccgcggccacgcctctcgaaggaacagcctctctcta
tccgtgggttcacactcgattccagatccagagttggaagcagcagggacttctggccag
caggggagacgggagggcagcagcacccgtgctctcaaacgcagctcagcttcagagccc
aacatcaccttttcacccagcccggccaaacggccaaaagcagtgtccagtcaccttttg
gagagttcatccagtgggccatcggcccccacaacctcacctgaagttacagagccgaga
aaggctccagcgtcagtcagcaccaagtccaaaaagagacggttagcagccgagccggct
cccgccagagccctgagcaagaagagcgcatcctaccctggccccagtggggcctcaagc
accccttctcaaaagcgtaagaaggcagaggcctcttcgttgtcatcctcctcttcttcc
tccctcctcagctcaagcagcgcggcaggccccctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcctcttcctctgcctcttcctcatcctcctcttcctcttcctcc
tcggccgccacaggcgccaacagctgtgcccctcagggtgcccggctaaaacagggcaag
gaccagagcaaagcgcgacggtcgcgctctgcatcctccccttctcccagaaggagcagc
cgggataaagagcagagcaaggctgctagctcctccaagtttgactggacatctcgcttc
aactccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggccgag
acctcctccaagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtcc
acaaagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgt
cagaagaccacgggctcttgcgccagcaccagtcggcgaggctcaggcctgggcaagcgc
ggagcagccgaatctcgccgacaggagaaaatggccgactccgacaacaaccaggatggg
gccaattcatcggccgcgcgcacagaggagactccacaaggggcgtcagcgtctagttca
gtggctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatg
ggtagactgcaagctctattggaggccaggggccttcctcctcacctgtttggcccattt
gggccccgtatgtctcagctgtttcataggaccattgggagcggagctagctcaaaggca
caacagctgctgcaggggcttcaggctacaggagacgaatcccagcagctccaggctgtt
atagagatgtgccagctgctagtgatgggtaatgaggagacgctgggaggattccctgtc
aagagcgttgtacctgccctgatcacactattacagatggagcataattttgatattatg
aatcatgcatctcgcgcccttacctacatgatggaagcactgcctcgctcctcggctgtg
gtggtagacgccatccctgtcttcctggaaaagcttcaggtaatacagtttattgacgtg
gcagagcaagctttgaccgccctagagatgttgtcacggaggcacaacaaagccatcttg
caggctggaggtctagctgcatgcttgctgtacttggagttcttcagcatcaatgctcag
aggaacgcattagccatcgctgctaactgctgccagagcatcacgccggacgaatttcac
tttgtggctgattctctgcccctgctcactcagagactcacacaccaggataaaaaatct
gtggaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaggagaac
ctgttacagcaggtggcgtcacgggacctgctgaccaacatccagcagctgctggtgctc
actccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctctctcatg
tgctccaactgtccgtgcttggctgtgcagctcatgaaacagaatatagcagagaccctg
cgtttcctgctctgtggcgcatctaatgggagctgtcaagagcagatcgacctcgttccc
agaagcccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctg
cccagagagggcatctttgcggttgatgccatgttaaagaaaggcagcgctcagaccaca
gagggcgccatctggcagtggagagatgacagaggcctgtggcacccgtacaaccgcatt
gacagccgcatcattgaaactgcacaccagaatggagaagacgagataagtctgtcgaca
ctcggccgtgtctacaccatcgacttcaactctatgcagcagataaatgaagacactggc
actgctcgtgccattcagagaaagcccaaccctctggccaaccccaacacaggagggcac
ttggaggtgcgtcgagaagacgcacgcgctcagctgatgaaggaggatcctgagctggcc
aagtgcttcataaagactctgtttggggttctgtatgaggtgtacagctcctcagctggg
cctgctgtcagacacaagtgccttagagccatcctccggatcatctactttgcagatgca
gagctgcttaaagacgtactgcgcaaccacgctgtgtcaagccacatagcttccatgctg
tccagtcaggacctgaagattgtagtgggctctctgcagatggccgagatcctcatgcag
aagcttccagatgtgttcagtgtttatttcaggcgggaaggtgttatgcaccaggtaaag
aacctcgctgaatccgaggtgttcctcaccagccctccgaaagcgtgcaccagcggcaca
gctagtctttgcaccaccaccatcaccacagcaaccactacagctgcttctaacgtcaca
cccgacctgggctcccccagtttccagcacagtatggacgattcgctggacctcagtcct
cagggtaggttgagtgatgttctgaaaagaaagcgccttcctaaaagaggaccaaggcgt
cccaagtactctccacccagagatgatgacaaagtggataatcaggctaagagtcctaca
accacacagtcccccaagtcctctttcctggccagtttgaatcccaagacctggggtaag
ctggggactcagacaaacagctccaactcagagccctcgcgtactgcaggggtcagtggt
ctggcacgagtgccacccaaggactcggtttcaaacaacagggataagataaaggcttgg
ataaaagaacaagccagtaagtttgtggagcgttactttaattctgagagcgtggatgga
agcaaccctgcattgaacgtcctgcaaagactctgtactgccacagagcagctgaatttg
caggttgacagtggtgtagagtgtctagaggagataagcagtattgtatctgaatccgac
gtgtcctcctttgagattcagcacagtggacttgtgaaacagctactgctgtatctgaca
tcaaacagcgaacgggacacgatcagtagagacgagagaatcaagaggttcctgcatgtg
ttcttcggctgcccgataccagggcaggaacctctgggacgtttggacccaacagagaat
ggcccactgctggcattggtgcacaagatgaacaactgccttagtcagatggaacagttt
cctgttaaagtgcatgattttcccagtgggaatggcaacggaagcagaggttcacaagct
cttaagttcttcaacacacatcagctgaagtgccagttgcaaagacacccagactgcacc
aatgtaaagcagtggaagggcggtccggtcaaaatcgaccccttggctttggttcaagct
attgagagataccttgtggttagagggtatggaaggattagggaggaggatgaagacagt
gacgatgatggttctgatgacgagattgatgaatctttggctgcccagttcttgaattct
gggagcgtacgtcacaggctgcagttctacataggggagcacctgctgccgtacaacatg
actgtttatcaggccgtgaggcagttcagtttacaggccgaggaggagcgagagagcaca
gatgatgaagcaaatcctctgggacgggctggcatctggaccaaaacacacacgatatgg
tataagccagtcagagaggacgaagagggctgtaaagacgctgtcggagggaagaggggt
cgcgcacagacggctcccactaaaacctccccacgaaatgccaagaaacaggacgaacta
tggcatgagggtgtgtgtcccagtgtgacaaacccattagagtcatacctcattagtgat
cctccagagggcattacttttgatgatccttcaatggaggtgattctgctgctgagggtc
ctgcactccatcagtagatactggttctacctgtacgataatgctgcatgtaaagagatc
attcccactggtgagtttattaacagtaaactgacagcaaaggccaacagacagttgcag
gatccactggtcatcatgacagggaacatccccacctggctcactgagctcggcaagacc
tgtccattcttcttcccgtttgacacgcggcagatgctcttctacgtgactgcatttgac
cgcgatcgcgccatgcagcgcctgctcgacaccaacccagagattaaccaatctgactcg
caagacagccgtgttgctccacgccttgacaggaagaagagaacgataaaccgtgatgag
ctcctgaagcaagcggagtcggtaatgcaagacctcgggagttccagagccatgctggaa
attcaatacgagaacgaggtgggaacaggccttggacctacgcaagagttctatgctctg
gtgtctcaggagttgcagagggccgacttgggtctttggagaggagaggaagtcactctc
tccaaccctaaagcagggagtcaggagggtaccaagtatatgttcagttccagagggttg
tttgctgtaccgtttgggcgaactaccaaaccagctcacatcgccaagatcaaaatgaag
ttccgttttcttggaaaactgatggctaaagcgatcatggacttcagattgttggacctg
cctctaggtttgccgttctataagtggatgctgaggcacgagtcctctgtcagctctcat
gacctggtcaacattgatcctggcgttgccaaatccatccagcacctggaggacatcatc
cgccagaagaagagaatagagcaggacagatcacatacacgggagaccctacagcaggcc
ttggagagtctcaacatgaacggctgctcggtggaagatctgggcttggacttcactctg
cctggattcccaaacatcgagttgaagaaagggggcaaagacgtgccagtcaccattcac
aacctggaggaatacctcagattggtggtctactggacactcaatgagggtgtctctcgg
cagtttgagtcatttagggaaggatttgagtctgtcttccctctgcatcacctgcagtac
ttctatcctgaagagctggatcagttgttatgtggaagtaagtcagagtcctgggatgtg
aagacactaatggagtgctgcagaccagaccacggctacacacatgacagccgtgcagtg
cgattcctgttcgaggtgctgagcagttttgatgcagagcagcagagacttttcctgcag
tttgtcacaggcagccccagacttcctgtcggaggattccggagcttaaaccctcccctc
accatcgttcggaagacgttcgagtcgacggagaacccggacgacttccttccatcggtg
atgacgtgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgag
aaactgttgattgctgcgcgcgagggccagcagtctttccatctgtcttga
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integrated database retrieval system
