Puntigrus tetrazona (Sumatra barb): 122362833
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Entry
122362833 CDS
T08985
Symbol
nedd4a
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEDD4a
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120
Ubiquitin mediated proteolysis
ptet04144
Endocytosis
ptet04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122362833 (nedd4a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122362833 (nedd4a)
09144 Cellular community - eukaryotes
04530 Tight junction
122362833 (nedd4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122362833 (nedd4a)
04121 Ubiquitin system [BR:
ptet04121
]
122362833 (nedd4a)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122362833 (nedd4a)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122362833 (nedd4a)
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122362833 (nedd4a)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
HECT type E3
122362833 (nedd4a)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
122362833 (nedd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
122362833
NCBI-ProteinID:
XP_043120387
LinkDB
All DBs
Position
18:complement(17850307..17883636)
Genome browser
AA seq
1240 aa
AA seq
DB search
MNMAALLPEVRGLQTDEDESRILRVKVIAGIGLAKKDILGASDPYTKISLYDPVNGEITS
LQTKTIKKTLDPKWNEEFFFRVHPRKHRLLLEVFDENRLVNGSRKSMLQISLQPCAGDRE
LAGCENGNGDGGSSSSSSTTSDAGYCSSNSIFEADAPDRKSISRRKARAPLRRCSSLVIF
PRSPCTTPPASPVSPVASPMIPPLPPSARSSFQTSHQMQLSSADASHDETSKGSVATAVN
GLRLSKTSASAEHRDAKPIVHFSVPPEQPPGPERTERHSSVLLHFANQRPLPSGKGSSAK
TKVNIDCSKTLEGPQTDNVPEPQKARLFRSTSACMLPSGRPSSTERRHDTFPTADKSSRK
GSHHVLHRSISLEVPCANAEISCHVSNAADLHSKKGPPHVHIHVSHGTSARKSNTLPEYS
TNGEMDHVPTCTERNDTTRDDFLGQVDVPLHQIPTENPNNERPYTFKDFLLHPRSHKSRV
KGHLRLKMTYLPKNSDAEDDPAEQNENLDPGWEFLEPHELCSPHHPQQLPALPPGWEERQ
DNLGRTYYVNHESRTTQWHRPTIQDSQRDNEQRQDTHGESQRAFLTRRQISEHDENHERR
ESPESWEIITADESTLYNSHSERSPPPPHSPMEFSGFCEEFSRLQAGNDRRTSLTPQGHG
SRRGSGQTLTAEEHPAHPVLLPTSAGLPPGWEEKQDSKGRIYYVNHNSRTTTWTRPLIQL
IQPPSEASAAASAMNPTVYAPPLLSPDVSPQHALAHSPEHTGLMPTGWEVRSAPNGRPFF
IDHNTKTTTWDDPRLKVPVAVRRRVSLDPTDLGPLPPGWEERVHSDGRIFYIDHNTKNTQ
WEDPRLQNSAITGPAVPYSRDYKQKYEYFRKKLKKPADIPNRFELNVRRNAVLEDSYRRI
LSVKRSDLLKARLWVEFEGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQI
NPNSGLCNEDHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSE
YFNSLRWILENDPTDLDLRFTIDEELFGQTHQHELKPGGADIVVNDDNXKEYIHLVMQWR
FVDRIQRQMTAFKEGFYELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNSYNS
NHPVIIWFWKTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRDK
LPRAHTCFNRLDLPPYESFEELREKLHMAIENAQGFDGVD
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggccgcgctgctcccggaggttcgaggacttcagaccgatgaggatgaatcc
agaatcttaagggtgaaagtcattgctggaattggattggccaagaaagacattttgggt
gccagtgatccatacaccaaaatctctctctacgatcccgtcaatggagaaatcaccagc
ctgcagactaaaaccattaaaaagacgttggatccgaagtggaatgaggaattcttcttc
agagtgcatcctaggaaacatcgtctgctgctggaggtgtttgatgaaaatcgtttggtg
aacgggagcaggaaaagcatgctgcagatctccttgcagccttgcgcgggagacagagag
ctcgccggctgtgagaacggaaacggcgatggaggttcctccagcagcagtagcaccacg
agcgatgccggctactgcagcagcaacagcatattcgaagcggacgccccggaccgcaag
tccatctctcggcggaaggcgagggcaccgttgcggcgttgctcatccttagtgattttc
ccacggagcccatgcaccacgccgccagcatcccccgtcagtccggtagcgtctcccatg
attcctccactgcctccgtctgcgaggagctcctttcagacctctcatcagatgcagctg
tccagcgctgacgcttcgcacgatgaaacatccaagggatccgtcgccactgcagttaac
ggtctgcggctctccaaaaccagcgcgtcagcagaacacagggacgccaaacccatcgtg
catttcagcgtgcctccggagcaaccgccaggaccagagcgaacggaaagacactccagc
gttctattgcacttcgcgaaccagcgaccgcttccttcagggaaaggaagttcggccaaa
acaaaggtcaacatcgactgctccaaaactcttgagggcccacaaaccgacaatgtcccg
gaaccccagaaagccaggcttttccggagcacctcagcctgcatgctgccaagcgggagg
ccgtcatcgacggaaagaagacacgacacttttccgactgcggataagtcatcaagaaaa
gggtcgcatcacgtccttcacaggagcatttctttggaggtaccctgcgcgaacgctgag
atttcttgtcacgtttcgaatgctgcagacttgcactccaaaaaaggccctccacacgta
cacatccatgtatctcatggcacaagtgcaagaaaatcaaacaccctgccggaatacagc
acaaacggcgaaatggatcatgttccaacctgcacagagagaaatgataccacgagggac
gacttcctcggacaagtggatgttcctctgcaccagatccctacggaaaatcccaacaac
gaaaggccatacactttcaaggatttcctgttgcacccgagaagtcacaagtcgagggtg
aaaggtcatctgcgactgaagatgacatacctgcccaaaaacagcgacgcggaggatgac
ccggccgagcagaatgagaatctggaccctggttgggagtttttggagcctcatgagtta
tgcagtcctcaccatcctcagcagctgcctgcgctgccccctggctgggaggagaggcaa
gacaacctgggacgaacctactacgtcaaccacgagagcaggaccacccaatggcacaga
cccaccatccaggacagtcaaagagacaatgaacagagacaggatacgcacggcgagtct
cagcgggcgttcctcacacgcaggcaaatatctgaacatgacgagaaccacgagcgcaga
gagtcacctgagagctgggagatcataacagcagatgagtccacactttataacagccac
agcgagcgctctccgccgcctccccactccccgatggagttcagcggattctgtgaggag
ttcagcagactgcaggccggaaacgacaggcgcacgtccctcacgccgcagggtcacggc
agccgcagaggaagtggacagaccctaacggcggaagagcatcctgctcaccccgtgtta
ttacccacgtctgccgggctgcccccggggtgggaggagaagcaggacagtaaggggaga
atttattacgtcaatcacaacagcaggacgacgacctggacgcggccgctcattcagctc
atacagccgccctctgaggcctcagcagcagcatcagccatgaatcccacagtctacgct
ccgccgctgctgtccccggacgtgtctcctcagcacgctctcgctcactcgccggagcac
acgggcctgatgccgaccggctgggaggtgcgcagtgctccgaacggacggcccttcttc
atagaccacaacactaagaccaccacatgggacgacccccgcctgaaggtccccgttgcc
gtgaggagaagagtctccctcgaccccactgacctcggcccactgccgcctggttgggag
gagcgagtacatagtgacggcagaattttctacattgatcacaacacaaaaaacactcag
tgggaggatccaagactacagaattcagccatcactggtccagccgtgccttactccaga
gactataaacagaagtatgagtacttccgcaagaaactcaagaaaccagctgacatcccg
aaccgctttgagctgaatgtgagacgtaatgctgttctggaagactcctaccgccgcatt
ctgtccgtcaaacgctcggacctgctgaaggcccgcctctgggtggagtttgagggagag
aaggggctggactatggaggcgtggccagagaatggttcttcctgatctccaaggaaatg
ttcaacccgtattatgggctgtttgagtattcagccacggataactacacccttcagatc
aaccccaactcaggtctgtgcaacgaggaccatctgtcctattttaagttcatcggccgg
gtggctggaatggctgtttatcacgggaagctcttggacgcgttcttcatccggcccttc
tacaagatgatgctgcagaagccaatcacgttacaggatatggagtcagtggacagcgag
tacttcaactccctgcgatggattttggagaacgaccccacagatctagacctcaggttc
accatcgacgaggagctctttggacagacgcaccagcatgagctgaaaccaggaggggct
gatattgtggtcaacgacgacaacnaaaaggagtatattcatctggtgatgcagtggagg
tttgtagaccggatccagagacagatgacggccttcaaagagggtttctatgagctgata
cctcaggacctgatcaagatctttgatgaaaatgagctggagctgctgatgtgtggctta
ggagacgtggacgtcaacgactggagagaaaacaccaaatacaaaaacagctacaactca
aatcaccctgttatcatctggttctggaagacggtgttgctgatggatgcagaaaagcga
atccgtttgctgcagtttgtgacgggaacgtcccgcgtcccgatgaacggcttcgctgag
ctctacggatccaatgggccgcagttgttcaccatcgaacagtggggcacgagggacaag
ctgcccagagcgcacacctgcttcaaccggctggatctccctccgtacgagtcgttcgag
gagctccgcgagaagctgcacatggccattgaaaacgctcagggctttgatggggtggat
tag
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integrated database retrieval system
