Puntigrus tetrazona (Sumatra barb): 122362924
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Entry
122362924 CDS
T08985
Symbol
ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122362924 (ctcf)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122362924 (ctcf)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122362924 (ctcf)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122362924 (ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
zf-C2HE
Zf-C2H2_ZNF451
zf-C2H2_6
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
122362924
NCBI-ProteinID:
XP_043120637
LinkDB
All DBs
Position
18:complement(3552709..3559797)
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AA seq
788 aa
AA seq
DB search
MEGGPTEAVVEDAGDAFKAKECKTYQRRREDEEVGAELLQAAGLEQAQVEGEPVVEAVNS
SVEMMVMDSLDPALLQMKTEVMEAAVGAPVGVAGAAHEATVTTVDDTQIITLQVVNMEEQ
QLGLGELQLVQVPVSAVPVTAATVEELQGTLVDATAMPKDGEPVICHTLPLPEGFQVVKV
GANGEVETVEQDELQAQDDQPPQQEEEDMVEAQNEDPAWSKDPDYTPPVKKAKKTKKSKL
RYNTEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELC
SYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAF
VTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDT
YKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD
LGVHLRKQHSYIEQGRKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMV
MHKRTHTGEKPYACSQCEKTFRQKQLLDMHFRRYHDPNFVPTSFVCTKCGKTFTRRNTMA
RHAENCTGMDSAEGENGAPAKRGRGGRKRKMRSRKDDDDEDSDEHGEPDLDDIDEDEDEE
EFLDDDQMDVEQAPPSIPIPAPAEPPVKRKRGRPPKNAPKPSPTKSVTKTTTAAAAIIQV
EDESTGAIENIIVKKEPEGADAAAAAAQPVVEEVEAVEAGVETVQLTVPEAAPNGDLTPE
MILSMMDR
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaagggggaccgactgaggcagtggtggaagatgcaggggatgctttcaaggccaag
gaatgtaagacttaccaaaggcgacgagaagatgaggaagttggagctgaattgctgcag
gctgctgggttagagcaagcccaggttgaaggggagcctgtggtggaggctgtcaacagc
agtgtggagatgatggtgatggactccctggaccctgccctgctccagatgaagacagaa
gtcatggaagctgctgttggtgcacctgttggtgttgctggtgccgcccatgaagccacg
gtcaccactgtcgatgacactcagatcatcaccctccaggtggtaaacatggaggagcag
cagttgggcttgggagagctacagttggtgcaggtgcctgtttcagctgtgcctgtcact
gccgccacagtagaggagctgcaggggacgctggtggacgccactgccatgcctaaagat
ggggagccggtcatttgtcacaccctgccattgcctgagggcttccaggtggtcaaggtg
ggtgcaaatggagaagtggaaactgtggaacaagatgagctccaggcccaagatgatcag
cctccgcagcaggaggaggaggatatggttgaagcccaaaatgaagatcccgcctggtcc
aaagatccagactacacaccccctgttaaaaaggccaagaagacaaagaaaagcaaactg
cgctacaacacagagggcgataaagacatggatgtctctgtgtatgactttgaggaggag
cagcaggagggactgctctctgaagtcaatgctgagaaagttgtgggtaacatgaaaccg
cccaaaccaaccaaaattaagaagaaaggtgttaagaagacattccagtgtgagctgtgc
agttacacttgtccgcgccgttccaatctggaccgccacatgaaaagccacacggatgag
aggcctcataagtgccatctttgtggacgagcctttaggactgtgactttgctgaggaat
cacctcaacacccacacaggcaccagaccacataagtgcactgactgtgacatggccttc
gtcaccagtggagagctggtgcgacacagacgctacaagcacactcatgagaaaccattc
aagtgctccatgtgtgactatgctagtgtagaggttagcaagctgaagcgccacattcgc
tctcacactggagagcgtccgttccagtgcagtctttgcagctatgctagcagagataca
tacaagctgaagagacacatgaggactcactcaggagagaagccgtatgagtgctatatc
tgtcatgcgcggtttacccagagtggtaccatgaagatgcacatactgcagaagcacaca
gaaaatgtggcaaaatttcactgccctcactgcgacaccgttattgcccgcaagagtgat
cttggtgtgcatctccgcaagcagcattcctatattgagcagggcaggaagtgccgttac
tgtgatgcagtgttccatgagcgctatgctctcatccagcatcagaagtctcacaaaaat
gagaaacgcttcaagtgtgatcagtgtgactacgcatgtcgtcaggagcgtcacatggtc
atgcacaagcgcacccatactggggagaagccatatgcctgcagccaatgtgagaaaacg
ttcagacagaaacagctgctggacatgcactttcgccgctatcacgaccccaattttgta
cccacatcctttgtatgcaccaagtgtggcaagaccttcactcgcaggaataccatggcc
agacatgctgagaactgcaccgggatggattctgctgaaggagagaatggagctccagcc
aaaagaggccgtggaggcagaaaaagaaagatgcgctctagaaaggatgatgatgatgaa
gatagcgatgagcatggagaacctgaccttgatgacattgatgaagatgaggatgaagag
gagtttctcgatgatgaccagatggatgtggaacaggctcctcccagcattcccatccct
gcaccagctgaacctcccgtcaaaaggaaacgcggcagaccacccaagaacgcacccaag
ccttctcctaccaagtctgtcaccaaaaccaccacagcagctgctgccattatccaggtg
gaagatgaaagcacaggggccattgagaacatcattgtgaagaaggagcctgagggagct
gatgcagctgctgctgctgcccagccagtggtggaggaagtggaggctgtcgaggctggt
gtagaaacggtgcagctaacggtccctgaagctgctcctaacggtgatcttactcctgaa
atgatccttagcatgatggaccggtga
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