Puntigrus tetrazona (Sumatra barb): 122363028
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Entry
122363028 CDS
T08985
Symbol
slc24a1
Name
(RefSeq) LOW QUALITY PROTEIN: sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
122363028 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122363028 (slc24a1)
Transporters [BR:
ptet02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
122363028 (slc24a1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
BUD22
CCDC47
Motif
Other DBs
NCBI-GeneID:
122363028
NCBI-ProteinID:
XP_043120833
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All DBs
Position
18:25952330..25962581
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AA seq
723 aa
AA seq
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MFLTRRKRLQLSRIILLLSGVFLCSLYQLTIRARLPEPWSEPQIAGKPEDGSDPGSGWSD
MTVLPTNLTTAEPNSSNHTDSVQSSEPATNVSIQTISRTETPTTTTNSTVNQCIFVDPDL
PKPTPVPTXATDTTTVVPNTTAPRPGDAPHMKGEXPEDIFSIEDRRKGWVVLHIFGMVYM
FVSLAIVCDEFFVPTLGVITDKLEISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGI
GTIVGSAVFNILFVIGMCALFSXEMLHLTWWPLFRDVSFYILDLIMLIIFFLDNTIMWWE
SMMLVGGYAVYVFFMKYNVQIERAFKSQLRKHKNIVKVIAVEEPEKDNGTSGEENRPPEP
EDKNRLKLKPTLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGEVKFKDKAQILNDMARGK
VENKKKEKSGEGDDQTEQSKDSKDSAPGAKEEEASQKPEAQKEGDTAAGGGSEKPGGSDD
SGDDEDDSDEDSDEDSDDDDDDDEDENEDEAGEEGENDEPLSLEWPDTRRKQATYLFLLP
IVFPLWLTVPDVRNPASKKFFVITFLGSIVWIAIFSYLMVWWAHQVGETIGISEEIMGLT
ILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLMYSSFHSLAPVPV
SSNGLFCAIVLLFLMLLFVIISIAACKWRMNKVLGSTMFILYFVFLVLSVMLEDRIIICP
VSI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgactcgaagaaagagacttcagcttagccggataatattacttctgtctggg
gttttcctttgttctttatatcagctcactattagagcaagactaccagaaccctggtct
gagccccaaatagcaggaaaacctgaggatggctctgatcctggctctggatggtcagat
atgacagtgcttccgactaatttgaccactgctgagccaaatagctccaaccacacagat
agcgtccagtcgtcagaaccagcaacaaatgtatccatccaaactatctctagaacagag
acacctacaacaaccacaaacagtacagtcaaccaatgcatctttgtggatccagacctt
ccaaaacccaccccagttcctacancggcaaccgacacgacaactgtagtgcccaacact
acagcgcccagacctggtgatgcaccacacatgaagggcgagntaccggaggacatcttc
tccattgaggatcgacgcaaaggctgggttgttctacacatctttggaatggtatacatg
tttgtttctttggccatagtctgcgatgagtttttcgttcctacgttgggagtcataaca
gacaaactggagatctcagatgatgtggcaggggcgacgttcatggctgctggaggctct
gctcccgaactcttcacttccttgatcggggtcttcatttctcatagcaatgtgggcatt
ggaactatcgtaggctcggctgtcttcaacatcctgtttgtgattggaatgtgtgcgctg
ttctccncggagatgcttcacctcacctggtggcctctttttcgggatgtttctttctac
attctcgatctcatcatgctcatcatcttcttcttggacaatactattatgtggtgggag
agtatgatgctggtgggcgggtatgccgtctatgttttcttcatgaaatacaatgttcag
attgagcgggcctttaagtctcaactcaggaaacacaagaacatcgtcaaagttattgcg
gtcgaagaacctgagaaggacaatgggacctcaggcgaagagaacaggccacctgaacca
gaagacaagaatagattaaagctgaagcccacactgcagcgcgggggcagttctgcctct
ctgcacaacagcaccatgaggaacaccatctttcagctgatgattcacacactggatcct
cttggagaggtgaaatttaaagacaaggctcagattttgaacgacatggcccgggggaaa
gtagagaacaaaaagaaggaaaaatctggtgaaggtgatgatcagacggaacagtccaag
gattccaaagactcagctccaggagccaaggaggaagaggctagtcaaaagcctgaggca
caaaaggaaggagacactgcagcaggaggaggatcagaaaagccaggaggttcagatgat
tcaggggatgatgaagatgacagtgacgaagacagcgatgaagacagcgatgatgacgat
gatgatgatgaggatgaaaatgaggatgaggctggagaggaaggagaaaatgatgaacct
ctgtcattagagtggccagataccagacgcaaacaggccacatatttgtttctgttgccc
attgtctttccactgtggctgacagttccagatgtcagaaaccctgcatccaagaagttc
tttgtcatcactttccttggttcaatagtatggattgctatattctcctatcttatggtg
tggtgggcacatcaggtgggtgagaccattggcatttctgaggaaatcatgggtcttacc
attctggccgcaggaacatccattcctgatcttatcaccagcgtgattgtggctcgaaaa
ggcttaggagacatggctgtctcgagctctgtaggcagcaacatatttgacatcaccatg
gggctgccggtgccctggctgatgtactcatcttttcattcactggcgccggtgcccgtg
agcagcaatgggctgttctgtgccattgtgctgctcttcctcatgctcctctttgtcatt
atctccatcgctgcctgtaagtggaggatgaataaagtgttgggatccactatgttcatc
ctctactttgtgttcctggtgctcagtgtcatgctagaggatcgaatcatcatatgtcct
gtgtccatctga
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