Puntigrus tetrazona (Sumatra barb): 122363029
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Entry
122363029 CDS
T08985
Symbol
dennd4a
Name
(RefSeq) LOW QUALITY PROTEIN: C-myc promoter-binding protein
KO
K20163
DENN domain-containing protein 4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122363029 (dennd4a)
Membrane trafficking [BR:
ptet04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122363029 (dennd4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
PPR
DUF2464
CAS_CSE1
Motif
Other DBs
NCBI-GeneID:
122363029
NCBI-ProteinID:
XP_043120834
LinkDB
All DBs
Position
18:complement(25964969..25993117)
Genome browser
AA seq
1708 aa
AA seq
DB search
MEDKKPSRVADYFVVAGLTDSSKPLEEDVHPEDGGHRTSAQLKAPITDVAVVIRSXREEV
PRGYICVECTPXGLPAELNGGSLMGPQIFLCYRRGRDKPPLTDLGVLFEWKEKLKLPDCQ
IIQTTPXGRPANISSSSSQRIYITYRRASENHXHATLAVTDICVIVPGKGETPPHAFCKV
DKNLNSSMWGSSVYLCYKNLLAKSNTLAFKAGLLSRYPEEDYDSFPLPESVPLFCLPMGA
SIECWPSHTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPEEHLTDKQCSQLGLQANGL
RPDGSMTVHTNKSICLLSLALFDAFQNFLTFLYRYSISGPHTLPIEKHISHFMHKVPXPS
PQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRLSTLLLNLGPXNAATLLVLAVTEHKILV
HSFYAQLFLPALHEALVSMIFPFHWPCPYIPLCPLALADVLSAPCPFIVGVDSRYFDLYE
PPTDISCVDLDTNTITHKEERRSLTWKILPRKACKHLINTLSNLYQQLDAGYHMSREEGQ
MEAFMSEREPGSGGKSLETLELEIQEAFLRFMAAILKGYRSYLLPITQAPSEKATDASSL
FDLQGFLKSRDRSHQKFYXLMTKTQMFIRFIEECSFVSDKDASLAFFDDCVDKVDSDKPE
DTRLIELDKSHRSEHTVYITPPELPALPEGEEPPIVYSYSGFPVLNPQLCELQDGPRVPK
ATSAVRHISPISPAAIFRRSQQEIKSAQRMAKTYSSIPQMWSKCLLRHCHGLWFICLPAY
VSACHSKVRALHTAYDVLRNMQDKKLQPPDEVCYRVLMQLCGQYGQPVLAVRVLFEMKKA
GVQPNAITYGYYNRAVLESTWPSSTRGGYFLWGKLRNVVRGVVLFKQVWRRQTTHPKDTH
LSDASDLDSVSHGSLDSSNDSAERVSIDTDFTKMDSSDDRSSTGGQSDQGYDSLSKEEVR
LGGGEEQNXSPDLKEKDRNSCPLSQTVLSKKEDSSPMVGIHPSATNVETRDVFSEALPKT
KRPNSLDIFGGKAVRPNTLDLTPDKTVRELSNESVPALIERSGXGVVSPPKVAVERTASC
TVAMERSISGVERSVSCSSALGRVVKRTGIEAGFDPLSLMMAETQPHCEGDNADTPTARR
DLAEEIHLYMNNLSSPLSQRXLSVDLKGHQTPSPHSSPRMPAALSSPXTSQLQPQPRTRL
FSSPSLPQGRVRRVREQRPTSLASPSSPTPSSSSFSMDSLLTPTLDVFKSSFLSAGKGVA
EKASRLYSRLSSQTSIAQDLNSDRVSVSSLGSGDPDCSSLIESDSCVDPDGLSSPQRDVT
QQVTRPKRSPYRSNHCLESPSAPSRLYRQSSLTGPPLTVMKALQTPDACSDSSLSQSMQN
YAVEVRMSSCSRCNTCESLVYDEEIMAGWTADDSNLNSTCPXCGSPFLPLLNVDIRNLGD
QERIPSQDAHTCQTDTADELPQVYNAASNLSSNGKKDPEPVTVPYLSPLVLWKELESLLE
NEGDQAISSAAIVDHHPIVFWNLVWFFRRLDLASSLPGLYLSSKHYCRDSQPLQSCASED
SKNVLVQILWDNPRLHQDPIKPCYLLWKSYCANPAVSEEEEQAVSLELLQSVVKSIQRND
VYQPMSQILQLLGTRLGFVRQRSLYRDILFLSLVALGKSSINIDAFDREYKMAYDRLTPS
QVKMTHNCDRPPSAGVMECRRTFGLPSL
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaaaaagccttctcgtgtagcagactactttgtggtggcaggactcaccgac
tcgtctaagcccctcgaggaagatgtccaccctgaggatggaggtcataggacttcagcc
cagctaaaggcgcccatcactgatgtggctgtggtgattcgctccnntagggaggaagta
cctcgaggatatatctgtgttgaatgcacccctnctggacttcctgccgaactgaatgga
ggaagcctcatggggccgcagatcttcctctgctataggagaggcagagacaaaccgccg
ctcacagacttgggcgtgctctttgagtggaaggagaaactgaaactgccggactgtcaa
attatacagaccacacctnctggccgccctgctaatatcagtagctcctcctcccaaagg
atctacataacatatcggcgtgcttctgagaatcacnntcacgccacgctggctgtcaca
gacatctgtgtcattgttcccggcaagggagagacaccaccgcatgctttctgcaaggtg
gacaagaatctcaacagcagtatgtgggggtcctctgtgtacttgtgctacaaaaatctt
ttggccaaaagcaacacacttgcattcaaagcaggtcttttgtccagatatccagaggag
gattatgattcctttcctttgcctgaatccgttcccctgttttgcctgccgatgggagcg
tcgattgagtgctggccctctcatactaaatattctcttcctgtcttttcgacattcgtt
ctcacaggcgcctctggagagaaggtttacggtgccgccatccagttctatgagccctac
ccagaagaacatttgactgacaagcagtgttctcagctgggcctgcaggctaacgggctc
aggcctgatggatccatgactgttcacaccaacaaaagcatctgccttctctcactggcc
ctttttgatgctttccagaactttctgacctttctttaccgatactccatctcaggtcca
cacactctgcccattgaaaagcatatttctcatttcatgcacaaggttcctnttccttcc
ccacaaaggccacgtatcctggtgcagctgtctccacatgatagcctgatgctgagccag
cctgtttcctctccgctccctctgagtggcggacggctctctacactgctgttgaacctc
ggcccanaaaatgcagcgactcttctggtgttggctgtgactgaacataagatcctagtt
cactctttttacgcccagctgttcttaccagcgttacacgaggccctggtgtcgatgatt
tttcccttccactggccgtgcccatacattcctctctgcccactggccctggcagatgtg
ctcagcgctccatgcccttttattgtaggggtggattcacggtactttgatctctatgag
ccaccaacggacataagctgtgtggacctggacaccaacactataactcacaaagaagag
cgcagatccctgacctggaagatcctgccaagaaaagcctgtaaacatctgatcaacact
ctcagcaatctctaccagcaactggatgcgggttatcatatgagtcgtgaggaaggacag
atggaggccttcatgagcgaacgggaacctggcagtggtgggaaaagtctggaaaccttg
gagcttgagatccaggaggctttcttgcgcttcatggcagccatcttgaaaggctaccgt
tcatacctgttgcccatcacacaggctccatctgaaaaagcaactgacgccagttcacta
tttgatctgcaaggctttttgaagagtcgtgatcgatcccatcaaaagttttacntcctc
atgaccaagactcagatgttcattcgtttcatcgaggagtgctcttttgtcagcgataag
gatgcaagccttgctttctttgatgactgtgttgacaaggtggacagcgataagccagaa
gacacgaggcttattgagcttgacaaatcccaccgcagcgagcacacggtctacatcacc
cctccagagctgccagcacttccagaaggagaagagccacctattgtttatagctacagt
gggtttccggtactgaacccccaactctgtgagcttcaggatggtcccagagtccccaaa
gcaacatcagccgtgagacacatcagtcccatcagcccagctgccattttcaggcgctcc
caacaggagatcaaatcagcccagaggatggctaagacatactcctccatcccacagatg
tggtccaagtgtctcctcaggcattgtcacggcctgtggttcatctgcctgcccgcttat
gtcagcgcctgccactccaaggtgcgggcgctgcacactgcttacgacgtgctgagaaac
atgcaggacaaaaagttgcagccccctgatgaggtgtgttatcgggtcctgatgcagctg
tgtgggcagtatggacagcctgttcttgctgtccgggttctttttgaaatgaagaaagcc
ggagtgcagcctaatgccattacctatggatactacaacagggctgttctggagagcaca
tggccttcctccaccagagggggatacttcctgtggggaaagctgagaaatgtggttcgg
ggtgtggtgctgttcaaacaagtatggaggaggcagaccacccacccaaaagacacccat
ctctctgatgccagtgatctcgacagcgtcagccatggcagtctggacagctctaacgat
tcggcagagcgagtttccattgatacagacttcactaaaatggattccagtgatgacaga
tccagcacaggtggtcagtctgatcagggctatgattctctgtctaaagaggaggtgagg
ttaggaggaggtgaggagcagaacncctctccagacttgaaggagaaggacagaaactct
tgcccattgtcccagactgtactctcgaagaaagaggattcatctcctatggttggaatc
catccatctgcaaccaatgtggaaaccagggatgtcttttctgaagcccttccaaagacc
aaaaggccaaactcactggatattttcggaggaaaggctgtaaggccaaacactcttgat
ctaactccagacaaaacagtacgagaactcagcaatgaatctgttccagcactgatcgaa
cgaagcggtnggggcgttgtgagcccacctaaagttgctgtggagaggactgctagctgc
acagttgccatggagaggagcatatcgggcgtggagaggagtgtgagctgcagcagtgct
cttggtcgagtggttaagaggacaggtatagaagcagggtttgatcctctgtcccttatg
atggccgagactcaaccccactgtgagggtgataatgcagacaccccaaccgcccgccga
gacctggctgaagagattcatctctacatgaacaacctgagcagcccgttaagccagcgc
nntctcagtgttgacctgaagggccatcagaccccgtcccctcacagctctccccgcatg
ccagcagctctcagctccccangcacctcccaactccaacctcagccacgcactcgtctc
ttctcctcgccctccctcccccagggccgcgtgcgcagggtcagggagcagcgacccacc
tccctggcctccccttcctcacctactccctcctcttcctctttctctatggactctttg
ctcaccccaaccctggacgtgttcaaaagcagcttcctctctgctgggaagggcgtcgct
gagaaagccagccgactatattcacgactttcctcccagacgtctattgcacaggacttg
aactctgaccgggtcagtgtgtcttctctggggtcaggtgaccccgattgctcctctctg
attgagagcgattcctgtgtggaccccgatgggctctcttccccacagcgtgacgtcact
cagcaggtcacacgtcccaaaaggagcccttacaggagcaaccactgcctggaaagccca
tctgcaccatctcgactctaccgccagtcttcactcactggtccgccgctgacagtaatg
aaagctctgcagaccccagacgcgtgttctgattccagcctttcacagtctatgcagaac
tacgctgttgaagttcgtatgtccagttgttcgcgctgtaacacctgtgagagtttggtg
tatgatgaagagatcatggctggttggacagcagatgattctaacttaaatagcacttgt
cccntttgtggctctccatttctgcctctgctcaatgtggacatcagaaacctgggtgac
caggaaaggatcccctctcaagatgcacatacttgccagacagacactgcagatgaacta
ccacaagtatataatgctgctagcaatctatccagcaatggcaaaaaagaccctgagcca
gttaccgtgccctacctgagtcctttggtgctgtggaaggaactggaaagcttgctggag
aacgagggggatcaggccatctcatctgcagccattgtggatcaccaccctattgtgttc
tggaacctggtgtggtttttccgtaggctggacctggccagcagcttgccaggcctctat
ttgagctccaaacactactgcagagattctcagcctctgcaaagttgtgcttctgaagac
agtaagaatgtcttggtccagatcctgtgggacaatcccagactgcatcaggaccctatc
aaaccttgctacttgctttggaaatcatattgtgcaaatcctgcagtatctgaggaggag
gagcaggctgtgagtctagagctgctgcagagtgtcgtgaagagcatccagaggaacgat
gtctaccagcccatgagtcagatactgcagctactgggaacccgactaggcttcgtcaga
caacgaagcttatatagagacatcctgttcctgtctttggtggctttgggcaagagtagc
ataaatattgatgcatttgatcgtgaatacaaaatggcatatgaccgtttaacgcccagc
caggtcaagatgacccacaattgtgaccgtccacccagcgccggagtcatggagtgcagg
agaacctttgggctgcccagtctctga
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integrated database retrieval system
