Pseudonaja textilis (eastern brown snake): 113433409
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Entry
113433409 CDS
T09005
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113433409 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113433409 (MSH2)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113433409 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_I
MutS_IV
AAA_27
MCU
Motif
Other DBs
NCBI-GeneID:
113433409
NCBI-ProteinID:
XP_026551780
Ensembl:
ENSPTXG00000008173
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MAASIDACVSAPREGCWPEGWGAENGFIRAVLALPAKPKTTVRFFERGDYYTVHGEDAKL
AAMEVFKTRVIIRILGSGAQKLESVALSKMNFEYFLRNLLLIRQYRAEVYKNKAGNKSTK
ETEWYLAYKGSPGNLAQFEDALFSNHDMCSSAGVVAIKLSSVDGQKVVGVGYVDSLSRKL
EVSEFADNDQFSNLEALLIQMGPKECLLPVGETAGDMEKLRQVVQRGGILITDRKKTEFS
TKDAVQDLNRLLQSGKKDCVSSAALPEMDKQVAISSLSAVIKYLELLNDESNFGQFELTT
FDLNQYMTLDHAAVRALNLFQDSSEFAQGTHSLAGLLNKCRTPQGQRLVNQWIKQPLMDK
NKIEERLDMVEAFMQDGELRQILQEDLLRRFPDFNRIGKKFQKKATLQDCYKMYQAINQI
PNVTQALEKNNGNRNMLLDAVFTKPLKELNCDFSNFQKMIDETLDMNTVESHEYLVKPSI
DPNLAELRESMNKLEKKMQGVLNVAAKELSLEAGKSIKLECNAQFGHFFRITYREEKVLR
NNVKYKILETQKNGVKFYNSALKDINEEYMKNRKEYEEMQDAVVKEIINVASGYREPIQI
LNDVIAQLDAIVSFAHASNAAPIPYVRPVILEKGQGRIILKASRHPCIEVQDDVAFIPND
VTFEKDKQMFHIITGPNMGGKSTYIRQTGVIVLMAQVGCFVPCDSAEVTIVDCILARVGA
GDSQLKGVSTFMAEMLETSSILRTATEHSLIIIDELGRGTSTYDGFGLAWAISEYIASKM
KAFAMFATHFHELTALADEIPTVNNLHVTALTTKETLTMLYRVKKGTCDQSFGIHVAELA
AFPKHVIECAKAKALELEDFQNIAISQEEDEEPAAKRCYREKQEGEQIIQDFLSQVKAMP
LTEMSEEEIRIKLKELKDNVLRKNNSFINGIISHINGTS
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatagatgcttgtgtttctgctccacgggagggatgctggcccgaaggc
tggggtgccgaaaacggctttattcgcgccgtcttggcgttgcctgccaaaccgaaaact
actgtgaggttctttgagcgcggcgactactatacggtgcatggcgaagatgcaaaactg
gcggcgatggaagtcttcaaaacacgagtgatcattcggatcctgggatcaggagctcag
aaacttgagagtgttgcactcagcaagatgaattttgaatattttttgcgaaatcttctt
ttgattcgtcagtacagggctgaggtatacaagaacaaggcaggaaataaatccaccaaa
gagactgagtggtatttggcctacaagggttctccaggtaaccttgctcaatttgaggat
gctctttttagtaaccatgatatgtgctcttcagctggtgttgtagccatcaagctgtcc
tcagttgatggacagaaagttgttggagtaggatatgtggattcactgtcaagaaaacta
gaagtatctgaatttgcagataatgatcagttttccaaccttgaagcactgttgatacaa
atggggccaaaggaatgtttgctgccagttggggagactgctggagatatggagaaactg
aggcaggtggttcaaaggggaggaatcctgatcacagacaggaaaaagactgaattttca
acaaaggatgctgttcaagatctcaaccgtttgctgcaatcaggaaagaaagactgtgtg
tctagtgcagcgttacctgaaatggataagcaggttgccatctcttctctatctgcagtg
attaaatacttagagctgttaaatgatgagtctaactttggacagtttgaacttactact
tttgaccttaatcaatatatgaccctggatcacgctgctgtcagagcccttaaccttttt
caggattcttcagaatttgcccaaggaacacattcactggctggattgttaaataaatgc
agaacacctcaaggacaaaggctagtcaaccagtggatcaaacaaccattgatggataag
aacaaaattgaagaaaggctagatatggtggaggccttcatgcaagatggagaactaaga
caaattcttcaagaagatctcctccgccgcttcccagatttcaatcggataggaaaaaaa
ttccagaagaaagctactctgcaggactgttacaaaatgtatcaggcaattaatcagata
cctaatgtgacacaggcactggaaaaaaataatggaaaccgcaatatgctactagatgcg
gtattcacaaaacctcttaaagagctaaattgtgatttctccaatttccaaaagatgatt
gatgaaactttggacatgaatacggtggaaagtcatgaataccttgtcaaaccttctatt
gatcccaatcttgctgaattgagagaaagtatgaataagctggaaaaaaaaatgcagggt
gtactgaacgttgcagccaaggaactaagtttggaagctggcaagagtatcaaattagaa
tgcaatgcacagttcggacattttttcagaattacgtacagagaagagaaggttttgcgg
aataatgtgaaatataagatcttggaaacccagaagaatggggtgaaattctataacagt
gcattgaaagatattaatgaagagtatatgaagaacagaaaagaatatgaagaaatgcaa
gatgctgtagttaaagaaataattaatgttgcatcagggtacagggaacccattcaaatt
ctcaatgatgtcattgcccagctagatgccattgtcagttttgctcatgcatcaaatgca
gcaccaataccatatgtgcgcccagttattctagaaaaagggcaaggaagaattatcttg
aaagcttccaggcacccttgcattgaagttcaagatgatgttgccttcatcccaaatgat
gttacttttgagaaggacaaacagatgttccacatcattactgggccaaacatgggagga
aaatctacttatatacggcagactggggtgatcgttcttatggcccaagtaggatgtttt
gtgccatgtgactctgcagaagtgactattgttgactgcattctggctcgagttggagct
ggagatagtcaactgaaaggggtatccaccttcatggcagaaatgctggagacctcctcc
atccttaggactgcaaccgagcattctttgataataattgacgagttagggagaggaaca
tcaacatatgatggatttggattggcctgggcaatttctgaatacattgccagcaaaatg
aaagcttttgctatgtttgctactcattttcatgaattgactgcactggctgatgaaata
cccactgtaaataacttgcatgttacggcattaactacaaaggaaacactgacaatgttg
taccgtgtgaaaaaagggacctgtgaccagagctttggtatccatgtagcagaattagct
gcctttcccaaacatgtgattgagtgtgccaaggccaaagctctggaactggaggacttc
cagaacattgcaatatctcaagaggaggatgaagaaccagctgccaaaagatgctacagg
gaaaagcaggagggggaacaaataattcaagatttcctttctcaagtgaaagcaatgcca
ttgacagaaatgtctgaagaagaaatccggatcaaactaaaggagttaaaggacaacgtt
ttgaggaaaaataattcttttataaatggaatcatttcccacatcaatggtacctcatga
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