Pseudonaja textilis (eastern brown snake): 113433413
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Entry
113433413 CDS
T09005
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6 isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
113433413 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113433413 (MSH6)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
113433413 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
113433413
NCBI-ProteinID:
XP_026551782
Ensembl:
ENSPTXG00000008177
UniProt:
A0A670YKI5
LinkDB
All DBs
Position
Unknown
AA seq
1334 aa
AA seq
DB search
MSRQSSLLTFFSKPAEKSHDGGSGSPTRDAEGRPPQETPPASAPSSSQGRTPALPPDCDF
NEFSPGDLVWAKLEGYPWWPCLVYAHPTEGSLLRGRGRASRIHVQFFEDDPSRGWVSIRY
IRPYKGSSGRDTQRGGMFHSSRPEIKRAMELADAAMRKGKSERLGLAVCDKPSESEEEEE
EEMEQVSDEGDDFDTAKELKSRNKRIARRKHSDGKAKKRKIFMDSDTEGSDMEFQPDEVS
SDENSVEMCDNETSESETVPEKKRSVKALTKHSPKQMQEKTCKSPQEVNLKNNLSETPSR
ELCPEFMYKLASYAAPESFDVRSSINGGAAGGGEGDGNPTVWEHEKIDWLQDGRRKDANR
RRQNDPDYDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVG
VNKLGLVFMKGTWAHSGFPEMAFDRFANVLVQKGYKIVRVEQMETPEQMEARCKSLAHPT
RFDRVVRREICRIISKGTQTYNILDGDYSETQNKYLLCIKEKTDDSAGLHRTYGVCFVDT
TVGKFYIGQFPDDRHCSRFRTLLAHHIPVQILFEKGNPSAETQKILKGLISFTIQESLTP
GSQFWNASKTLKTLIEEGYFQNKENTDSGITLPPVIKSMTAESDSLGFTPAENSELALSA
LGSCVFYLKKCIIDKELLSMANFEEYIPVDVDMVNRTRSSSISEKKNQRMVLDGVTLANL
EILQNATRSSIEGTLLEKIDTCCTPFGRRLLKQWLCAPLYNPCAINDRLDAVEDLLAEAA
KMSDIRDRLKKLPDLERLLSKIHSIGSSLKNQNHPDNNAILYEEARYSKKKIIDFLSVLE
GFNIIIEILSILKDTVDGFKSKILKQIATVKSKNPVGCFPDLKAELERWDSAFDHNVARR
TGVVNPRTGFDSDYDKALADISEIEESLRQYLEKQRKRLGVRAVMYWGAGKNRYQMEIAE
TAVPQDLPDEYIMKSSRKGYKRYWTKDIEKMLNDIINAEERRDAAQKDCMKRLFYDFDKT
RKDWQTAVECIAVLDVLLCLACYSQGCDGPLCRPEILLSENTSPFLELKSSRHPCITKTY
FGDDFIPNDIIIGLEDEKTNSRATCVLVTGPNMGGKSTLMRQAGLLVIMAQLGCYVPAES
CRLTPVDRVFTRLGASDRIMSGESTFFVELSETSSILQHATQHSLVLMDELGRGTATFDG
TAIASAVVKELSENIKCCTMFSTHYHSLVEDYSHSLSVRLGHMACMVENECEDPSQETIT
FLYKFVKGACPKSYGFNAARLADIPEEVIQKGHKKAKEFEKAVLSMKVFRNLCWIAEGAL
AARDYLDKLTLLHV
NT seq
4005 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgccagagcagcctcctcacgtttttctcaaagcctgcggagaagagtcatgac
ggcggcagcggaagccccaccagagacgccgagggccgccccccgcaagagacaccgccg
gccagtgcccctagtagcagccagggcaggacgccagcgcttccgcctgattgtgacttc
aatgagttttcacctggtgatttagtttgggccaaacttgaaggctacccgtggtggcca
tgccttgtttatgcacacccaacggaaggatcacttttaagggggagaggaagagcatca
cgtatccatgtacagttctttgaggatgatccttcaaggggctgggttagcattagatac
ataagaccatataaaggttcttcaggcagagacacccaaaggggaggtatgtttcacagt
tcaagacctgaaattaaaagagcaatggaactggcagatgctgctatgagaaagggtaaa
agtgaacgactaggtctagctgtgtgtgacaaaccttcagaaagtgaagaagaagaggaa
gaagaaatggagcaggtgagtgatgaaggtgacgatttcgacacagcaaaggaactaaaa
agtagaaataaaaggatagctagacgaaagcattctgatggaaaagccaaaaagagaaag
atttttatggattcagacacagagggttccgatatggaatttcagccagatgaagttagc
agtgatgaaaatagtgttgaaatgtgtgacaatgaaacttctgaatctgaaactgtgcct
gaaaagaagcgttccgttaaagcacttactaaacattctcctaaacaaatgcaggaaaag
acatgtaaatccccccaagaggttaatcttaaaaacaacctatctgaaacacccagtagg
gaactctgtcctgaattcatgtataaattagcatcttatgcagctcctgaaagttttgat
gttcgatcaagcattaatggaggagcagccggagggggagaaggagatggtaatccaact
gtatgggagcatgaaaaaatagattggcttcaggatggaagaaggaaggatgctaataga
agacgacaaaatgatccagattatgacccaagtactttatttgtgccagaggattatctt
aaaaactgcactccaggaatgaggaaatggtgggagttgaagagtcaaaattttgatgct
gtgattttttataaagttggaaaattttatgagttatatcatatggatgctgttgttggt
gtaaataaacttggattggtatttatgaaaggcacctgggctcactcaggttttccagaa
atggcatttgatagattcgccaatgtcctagtccaaaaaggttataaaattgtacgagtc
gagcagatggagacccctgagcagatggaagcacgatgtaaatctttggctcacccaaca
agatttgacagagttgtgcgtcgagaaatatgcaggataatttccaaaggcacacagacc
tataatattcttgatggtgactattcagagacccagaacaaataccttctttgcataaaa
gaaaaaacagatgattctgctggcctgcatcgtacttatggagtttgctttgttgataca
acagttggaaagttttatattggccagtttccagatgaccgtcattgttctaggtttaga
acacttctggctcatcatattcctgtccagatactttttgagaaaggaaacccctctgca
gaaacacaaaagatacttaaaggcttaatctcttttactattcaagaaagcttgactcct
ggttctcagttctggaatgcatctaaaactttaaaaactctcattgaagaaggttatttt
cagaacaaagagaatacggatagtggaatcactttgccccctgtgatcaaatccatgact
gcagaaagtgattcactgggatttactcctgcagaaaacagtgaacttgctctctctgct
ctaggcagttgtgtattctatcttaaaaaatgtattattgacaaggaacttttatcaatg
gcaaattttgaagaatacattcctgtagatgttgatatggttaacagaaccagatcaagt
agcatttctgagaaaaaaaaccagcgaatggtactagatggggtaacactggcaaacctg
gaaatactgcagaatgcaaccaggagttcaatagagggcacgttattggaaaaaattgac
acttgttgtacaccttttggaagaagactcctgaagcaatggctctgtgcgccattatat
aatccttgtgccattaacgatcgcctggatgcagttgaggatctcctggctgaggctgct
aaaatgtctgatatccgtgaccgtctcaaaaagctcccagatcttgaaaggctattgagc
aaaattcatagtattggatcttctcttaagaaccagaatcatccagacaataacgctatt
ttatatgaggaggctaggtacagcaagaaaaaaattatagatttcttgtctgtactggaa
ggatttaacataataattgaaattctctcaatcttgaaagatactgttgatggctttaaa
tctaagatactaaaacaaatagcaacagtgaaatcaaaaaatccagtaggctgcttccca
gacttgaaagcagaacttgaaagatgggattctgcctttgatcataatgttgcacggaga
acaggtgtggttaatccaagaactggttttgattctgattacgataaagcattagcagat
atcagtgaaattgaggaaagtcttcgccagtatttggaaaaacaacgcaaaagacttggt
gtcagagctgtgatgtattggggagcaggcaaaaaccgttaccaaatggagattgcagaa
actgctgtgcctcaggatttacctgatgaatatatcatgaagtccagtagaaagggctat
aaacgttactggacaaaagacatagagaagatgttaaatgatattatcaatgctgaagaa
cggagagatgcagcacaaaaagattgtatgaaaagattattctatgacttcgataaaacc
agaaaagattggcaaactgcagtggaatgcattgctgttctagatgttttgttatgcctt
gcatgctatagtcagggatgtgatggaccattgtgccgcccagaaatcttgttgtcagag
aacacctcaccttttctggagctcaaaagttcgcgtcatccatgcattacaaaaacatac
tttggagatgatttcatccctaatgatattataataggcttggaggatgaaaaaacaaac
agcagagctacttgcgtccttgtgactggtccaaacatgggaggaaaatctacgctcatg
agacaggctggtctcttggtaataatggctcagttgggatgctatgtacctgctgaatct
tgcaggcttactcctgttgatagagtgttcactagactaggagcttcagatagaattatg
tcaggagagagtacattctttgttgagcttagtgagacttcgagtatactgcaacatgca
acacagcattcccttgttcttatggacgagctagggagaggaacagcgacttttgatgga
actgctattgctagtgcggttgtcaaagaactttcagagaatattaagtgttgtacaatg
ttttcaacacattaccattctttagtagaagattattcccacagtctctctgtacgattg
ggacacatggcttgtatggtagaaaatgaatgtgaagatcctagtcaagaaacaatcaca
ttcctttataaatttgttaagggggcttgccctaaaagttatggatttaatgctgcacgg
cttgctgacattccagaagaagtgattcagaaaggccacaaaaaggcaaaagaatttgaa
aaggctgttctttcaatgaaagtatttaggaatctttgttggatagctgaaggagcatta
gcagccagagactatcttgacaaactaactctgcttcatgtttga
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integrated database retrieval system
