Pseudonaja textilis (eastern brown snake): 113433434
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Entry
113433434 CDS
T09005
Symbol
CCDC88A
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ptex03037
]
113433434 (CCDC88A)
Cilium and associated proteins [BR:
ptex03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113433434 (CCDC88A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HOOK_N
APG6_N
GAS
KASH_CCD
Motif
Other DBs
NCBI-GeneID:
113433434
NCBI-ProteinID:
XP_026551828
Ensembl:
ENSPTXG00000008398
LinkDB
All DBs
Position
Unknown
AA seq
2031 aa
AA seq
DB search
MENEIFTPLLEVFISSPLVTWVKTFGSLAGQNASNLEEYVALLDGVFLNEVMLQINPKVP
SQRINKKINNDASLRIQNLSILIRQIKSYYQETLQQLIMMPLPNVLIIGKNPFSEQGTEE
VKKLLLLLLGCAVQCQKKEEFIERIQSLDFDVRAAVAAHIQEVTHNQENVFDLQWMDDGA
VAQDYIEPLLKNMALHLKRLIDERDEHSETIIELSEERDSLHFLPHASAAQSPCGSPGMK
CTESRQHLSVELADAKAKIRRLRQELEEKTEQLLDCKQEFEQNETELKRLQQENMSLLLD
ARSARVYRDELDVLREKAIRVDKLESELSRYKERLHDIEFYKARIEELKEDNQVLLETKT
MLEDQLEGTRARSDKLHELEKENLQLKAKLHDMEMERDMDRKKIEELMEENMSLEMAQKQ
SMDESLHLGWELEQINRSSEICEVPQKSLGHEVNELTSSRLLKLEMENQTLLKTVEELQN
AMGSLEGNNSKLMKMERENQRLSKKLEGLKNEFTEEKQSHQSSQNLCKDLMKEKAQLEKT
IETLRENSERQIKILEQEIEHLNQTVTSLRQRSQISAEARVKDIEKENKILHESIKETSS
KLSKIEFEKKQMKKELEHYKERGERMDELEKEVHHLEKENELLQKRITNLKITCEKIDSL
EQENSSLDVENRKLKKTLDSLKNLSFQLESLEKENAQLDEENLELRRSVESLKSTNIKMA
QLELENKELESEKGQLQKSLDLMKASFKKTERLEVSYQGLDTENQRLQKTLENNNKKIQH
LESELQELESENQTLQKNLEELKISSKRLEKLEKENKLLEQETTQLEKDKKQLEKENKRL
RQQADVMDSTLEENNVKIGHLEKENKSLFKEIGLCKEASIRLKEAEKENKELVKRATIDK
KTLVTLREDLVNEKLKTQQMNNELEKLTHELEKIGLNKERLLHDEQSTDDSKYKLLESRL
ESTLKKSLEIKEEKIAALEARLEESTNLNRQLRQELKIVKKNYEALKQRQEEEKMVQSYS
SKLDEESQPVTKWERDNQETTRELLKVKDRLIEVERNNATLQAEKQALKTQLKQLETQNN
NLQSQIIALQKQTVSLQEQNTTLQTQNAKLQVENSAINSQSTSLMNQNAQLLIQQSTLEN
ENESIIKEREDLRSFYDSLIKDHEKLEQLHERQATEYESLISKHGNLKSVHKNLEVEHKD
LEDRYSQLFQQKVQLEELEKGLKVEQEKMIQQNKKHEMVAVEYKKLCEENDRLNHTYIQL
LKENEVLQVDHKNLKTLLNSSKLEQTRLEAEFSKLKEQYQQLDITHTKLNNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQNMESKDLFHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYEPSPPRRRGNWITLKMRKLIKSKKDVNRERLKSLSLTPTRSESSEGFLQLPHQ
DSQDSSSVGSNSLEDGQTVGTKKSSMVALKRLPFLRNRPKEKDKMKAFYRRSMSMNDLMQ
SMVLAGGQWIGSSEHLEGPDDTSTGKRRKELGSMAFSTTSINFATVNSAAGLRSKQLLNN
KDTTSFEDVSPQGISDDSSTGSRIQASRPASLDSGRTSTSNSNNNASLHDVKAGAGNNQS
RPQSHSSGEFSLLHEHEAWSSSSSSPIQYLKSHTKSSLLLHHTMSEKIDKQGIRRIKTKS
PGSEMVTLQQFLEESNQVTSVELKSSSKDNLLDEVMKFFSENAELTGREKLSKQTSGSSG
IVRSQSVRNTTELSDGKLGKQEPFARLNLNRTEDSKDLNFLETYAAGSQGKVRSVKENVQ
LQRQSKDCNPYATLPRASSVISTAEGTTRRTSIHDFLSKDTRQPIFVDPTPATAEQSIIS
SSSEYNPQQQSSIFYYAPDNAVTFSKNDLADITIPDHLNIPERLSNSRTKTKFITKTFSL
SNVNNDKVGISSSGHFSMPFLTLNTELVCDVSGLPQTSITRTAKSFHSLVKLPQKDHKQP
YENQKSDNKKIDVTQSSNKLKSLVHTDPNESESPLLADEDTQTIWYEYGCV
NT seq
6096 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgagatattcacacctcttttggaggtcttcatatccagcccacttgttacc
tgggttaagacatttggatccttagctggacaaaatgctagcaacctggaagaatatgtt
gcacttctagatggagttttcttaaatgaagttatgttgcaaataaatcctaaagtacct
agtcaaagaataaataagaagatcaacaatgatgcatcacttcgaattcaaaatttgtct
attttaataagacaaattaaatcatattatcaggagacattgcagcaattaatcatgatg
cctttgccaaatgttttaataattggaaaaaatcccttttcagaacaaggcactgaagaa
gtaaaaaaactcctactacttctgcttggttgtgctgttcagtgccagaagaaagaagaa
ttcattgaaagaatacagagtttagattttgatgtaagagcagctgttgctgcccatata
caagaggtaacccataatcaggaaaatgtgttcgatctccagtggatggatgacggtgct
gtggctcaagattatattgaacctctcctaaaaaacatggcattgcatttaaaacgactt
atagatgagcgagatgagcattctgagactatcatagagctttctgaagaacgagattct
cttcattttctacctcatgcatcagcagcacaatcaccttgtggatctccaggaatgaaa
tgcactgaaagcagacaacacttatcagtagaattagcagatgccaaagcaaagattaga
aggcttagacaagagcttgaggaaaagactgaacagttgttggattgtaagcaagaattt
gaacagaatgaaactgaattaaagcgacttcaacaagagaatatgagtttacttttggat
gcccgatctgccagagtgtatcgggatgaacttgatgttctcagagagaaggcaattcgg
gttgacaagcttgaaagtgaactcagccgatataaagaaagactacatgatattgaattc
tacaaggctagaatagaggagctaaaagaggataatcaagtattactggaaacaaagaca
atgttggaagatcagttagaaggaacccgagcccgttctgataaattgcatgaattggaa
aaggagaatctgcaattaaaagctaaactccacgatatggagatggaacgtgatatggat
cggaagaaaattgaggaacttatggaagaaaatatgtcactagaaatggcccagaagcaa
agtatggatgaatcactacatttgggctgggaacttgaacagataaacagatcatcagaa
atttgtgaagtgccacagaagtcacttggtcatgaagtgaatgaactaacatctagtaga
ttattaaaactagaaatggaaaaccaaactttattaaaaacagtagaagaattacaaaat
gcaatgggttctctggaaggcaataactcgaaactaatgaaaatggaaagagaaaatcaa
aggctaagtaaaaagctggaaggacttaagaatgaatttactgaagagaaacagagtcat
cagagtagtcagaatctttgcaaagatcttatgaaagagaaagcacagcttgaaaaaacg
atcgaaactttgagagaaaattcagaaagacagattaaaatcctggaacaggaaatcgaa
cacttgaatcaaactgtaacttcacttcgacagcgttcacaaatcagtgctgaagcaaga
gtaaaagatattgagaaggaaaataaaattctccatgaatctatcaaagagacaagcagc
aaactgagtaaaatagaatttgaaaagaagcaaatgaaaaaagagttagaacattataaa
gaaaggggagaaagaatggatgagctggagaaagaagttcatcatcttgaaaaagaaaat
gaactattacagaaaagaattactaatttaaaaattacatgtgaaaaaattgattcttta
gaacaagagaattccagtctagatgttgaaaacagaaagctgaaaaagactttagatagt
ctgaaaaatctcagctttcaattagagtccttagagaaagagaatgcacaacttgatgaa
gaaaacttagaactcagaagatctgttgaatctttgaagagtaccaacatcaagatggct
cagttagaactggaaaataaagaactggaaagtgagaaaggccagctacagaagagcctg
gatcttatgaaagcatcctttaaaaagacagaacgtttagaagtgagttatcaaggcttg
gatacagaaaatcaaaggttgcagaaaaccctagaaaacaataacaaaaagattcaacat
ctagaaagtgaattacaagaactggagtcagaaaatcagaccctgcaaaaaaatcttgag
gaactcaaaatctccagtaaacgtttagaaaaattagaaaaagagaataaacttttggag
caagaaactacccaactagaaaaagataagaaacagctagagaaagagaataaaaggctc
aggcagcaagcagatgttatggatagcacactagaagaaaataatgtgaaaataggtcac
ctggaaaaagagaacaaatcactctttaaagaaattggtttatgtaaagaagcatctatt
cgtctaaaagaagcagaaaaggaaaataaagagcttgtaaaaagagctaccattgacaaa
aaaacacttgtaacattacgtgaggatttagtgaatgaaaaactgaagacacagcagatg
aataatgagttagaaaaacttacacatgaacttgaaaagataggtttaaacaaggaacgt
ctcttacatgatgaacagagtactgatgacagtaaatacaaacttttggagtcaaggtta
gagtccacactgaagaaatcacttgaaataaaagaagaaaaaattgctgctttggaagct
cgattagaagaatcaacaaatctaaatcgacagctgcgtcaagagcttaagatagtgaaa
aagaattatgaagctctcaagcaaagacaagaggaagagaagatggtacagagttattct
tcaaaacttgatgaagaaagtcagcctgtcactaaatgggaaagagataatcaggaaact
actagagaacttttgaaggttaaagatagattaattgaagttgaaagaaataatgcaact
ctgcaggcagagaagcaagccctgaaaacacagctaaagcaacttgaaacacagaataat
aatttgcaatctcagataatagcacttcaaaaacagactgtttccttacaggagcaaaat
acaaccctgcaaactcaaaatgcgaaacttcaggtggagaattcagcaattaattcccaa
agcacatcacttatgaaccagaatgcacagctattgattcaacaatcaaccttagaaaat
gaaaatgaatccataataaaggaacgggaagacttgagatcattttatgattctctaatc
aaagatcatgaaaaattggaacaacttcatgagcggcaagcaactgaatatgaatctctc
atttctaagcatggaaaccttaaatctgtacataagaatcttgaagtagaacataaggat
ttagaagacagatacagtcaattatttcagcaaaaagtacaattagaggaactggaaaaa
ggcctcaaagtggagcaagaaaagatgattcagcaaaacaagaaacatgaaatggtagcg
gtggaatacaaaaaactttgtgaagaaaacgatagattaaatcacacatatatacaactt
ttgaaagagaatgaagttcttcaggttgatcacaagaatttaaaaactttactgaacagt
tctaaattagagcaaacacgactggaggctgaattttctaaacttaaagaacaatatcaa
caactggatattactcacacaaaattaaataatcagtgcgagttgcttagccaactaaaa
gggaacttggaagaagaaaacagacatctactggaccaaatacagactttaatgctacaa
aacagaacacttttggaacagaatatggaaagcaaagatctcttccatgttgagcaaagg
caatatattgacaagttgaatgaattgagaagacaaaaagaaaaattagaagaaaagatt
atggatcagtataaattctacgaaccatctccacctagaaggagaggcaactggattact
ctgaaaatgaggaaattgataaaatcaaagaaagatgtcaaccgagaacggcttaaatct
ctgtctctgacaccaacccgctcagaatctagtgaaggatttcttcagctgccacatcaa
gatagtcaagatagttcctctgtgggttcaaattcacttgaagatggccagacagtgggg
actaaaaaaagcagcatggttgcactgaaaagactgccctttttgaggaacagaccgaag
gaaaaagacaaaatgaaggccttctaccgtcgctccatgtcaatgaatgacctgatgcag
tccatggtcttagcaggaggacaatggataggtagttctgagcatctggaaggtcctgat
gatacatccacgggtaaaaggagaaaagaattgggatctatggccttctctactacatcc
atcaactttgcaactgtcaactctgctgcaggcttgagatccaagcagttgcttaataat
aaagatacaacatcttttgaagatgtaagtccacaaggaattagtgacgattctagtaca
ggttcaagaattcaagcttccagaccagccagccttgatagtggcagaacatcaactagc
aatagcaataataatgcatcactccatgatgtcaaagcaggtgcaggtaacaaccaaagc
aggcctcaaagccacagtagtggagaatttagcctacttcatgagcatgaagcatggtcc
agcagtagcagcagtcccatacagtatttgaaaagtcacactaagtctagtctcctgctt
catcatacaatgtcagaaaaaatagataaacaaggaatacggagaattaaaacgaaatcc
cctggaagtgaaatggttactctgcagcaatttctggaagaaagtaatcaagttacttca
gttgagctaaaatcttcaagcaaagataatcttttggatgaagtaatgaaatttttttca
gaaaatgctgaattaacaggaagagaaaaactaagcaaacagacatcaggcagtagtggt
attgtcagatcacagagtgtaagaaatacaacagaattatctgatggaaagttaggtaag
caagagccttttgcaaggctcaatttaaacagaacagaagattctaaagatttgaacttt
ttagagacttacgctgcaggcagtcagggaaaggtcagatctgttaaagaaaatgtccag
ttacagcgacaatcaaaagactgcaatccctatgctactttacctcgtgcaagcagtgtg
atttcaacagcagaaggaactactcggaggaccagtatccatgattttttatctaaggac
actaggcagccaatatttgttgatccaactccagctacagctgaacaaagtattatatca
tcttcgagtgagtacaatcctcaacaacaatcttctattttttattatgctcctgataat
gcagttactttttccaaaaatgacttagctgatattactatacctgatcatttgaatata
cctgaaaggcttagcaattccagaacaaagaccaaatttattactaaaacattttctctc
agtaatgtaaataatgataaagtaggcatatcatcttcaggccatttttccatgccattt
ttgacacttaatactgaattagtctgtgatgttagcggattacctcaaacatccataacc
agaacagctaaatcatttcattcattggtgaaattgccacagaaggatcacaaacaaccc
tatgaaaatcagaaatctgataataaaaagatagatgtcacacagagtagcaataaactt
aaaagccttgtgcatacagatcctaatgagagtgaatcccctttattagctgatgaagat
acccaaactatttggtatgaatatggttgtgtatga
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integrated database retrieval system
