Pseudonaja textilis (eastern brown snake): 113433593
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Entry
113433593 CDS
T09005
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113433593 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113433593 (XAB2)
03041 Spliceosome [BR:
ptex03041
]
113433593 (XAB2)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
113433593 (XAB2)
Spliceosome [BR:
ptex03041
]
Complex B
Other components
Prp19-related factors
113433593 (XAB2)
Complex C
113433593 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
TPR_2
Suf
TPR_12
TPR_8
TPR_15
ARM_TT21_C
ARM_TT21
RPN7
TPR_1
TPR_16
NRDE-2
LTN1_E3_ligase_6th
ATG1-like_MIT2
Motif
Other DBs
NCBI-GeneID:
113433593
NCBI-ProteinID:
XP_026552026
Ensembl:
ENSPTXG00000003662
LinkDB
All DBs
Position
Unknown
AA seq
895 aa
AA seq
DB search
MGGQPNARRRRGTDSMLNFEGNEEGRKDVIFARRIWPRQAEAAMPESETVSGKRELFFEE
EDLQYEEEILRNPFSVKCWIRYIDFKQNAPKHILNLIYERALKELPGSYKLWYNYLKQRR
KQVKSKCVTDPCYEEVNNCHERALVFMHKMPRIWLDYCQFLMDQCRITRTRRTFDRALRA
LPITQHHRIWPLYLKFVRLYPLPETAVRVYRRYLKLSPENAEEYIEYLRSIDRLDEAAVR
LGAVVNDERFVSKEGKSNYQLWHELCDLISQNPDKVKSLNVGAIIRGGLTRFTDQLGKLW
CSLADYYIRSGHFEKARDVYEEAIQTVMTVRDFTQVFDSYAQFEESMIAAKMETTSEMGR
EEDDDVDLELRLARFEQLITRRPLLLNSVLLRQNPHNVHEWHKRVKLYEGKPWEIINTYT
EAVQTVDPFKATGKSHTLWVSFAKFYETNGQIEDARTIFEKATKVNFKQVDELASVWCEY
GEMELRHENYDQALRILRKATAIPAKKAEYFDSTEPVQNRVYKSLKVWSMLADLEESLGT
FKSTKAVYDRILDLRIATPQIIINYGLFLEEHKYFEESFKAYERGISLFKWPNVYDIWNT
YLTKFIDRYGGKKLERARDLFEQALDSCPQKYAKTIYLLYAKLEEEYGLARHAMAVYERA
TQAVLPSEKHDMYNIYIKRAAEIYGVTHTRSIYEKAIEVLSDEHAREMCLRFADMECKLG
EIDRARAIYSYCSQMCDPRTTATFWQTWKEFEIRHGNEDTIREMLRIKRSVQATYNTQVN
FMASQMLKVYSNATGTVSDLAPGQSGMDDMKLLEQRAEHLAAEAERDQPRAKEKILFVRS
DASRSELAELSKRANPDEIDINLDDSDESEDNEPDEVQLEQKTVPSAVFGGLKED
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgggaggccagcccaatgcaagacggagacgagggacggactcgatgttaaatttcgaa
ggcaacgaagaagggagaaaagacgtcatctttgcgcgccgtatttggcctcgacaggca
gaggccgcgatgccggagtcggagactgtctcaggaaagcgggagcttttcttcgaggaa
gaagacctacaatatgaagaagagatcttgcgcaacccattttctgtcaagtgctggatc
cgctatattgacttcaagcagaatgctcccaaacatatcctgaacctgatctatgagaga
gctcttaaggaattgccaggaagctacaagctctggtacaactatcttaagcagcggcgg
aaacaagttaagagcaaatgtgtaacagatccctgctacgaagaagttaacaactgccat
gagcgtgccctggtcttcatgcataagatgcctcggatatggctagattactgccagttt
ctcatggatcaatgtcggatcacccgtacccgcaggacatttgaccgggcgctcagagct
ctgcccatcacacagcaccatcgtatctggccactttacctgaagtttgtgcgactctat
ccattacctgagacagctgtacgggtctaccgtaggtacctaaagctgagccctgagaat
gcagaggaatatattgagtatctgcgttccattgaccgtctggatgaagccgctgtccgt
cttggagctgtggtgaatgatgagcgttttgtttccaaggagggaaaatctaattatcag
ttatggcacgagctctgtgatctcatctctcaaaatccagacaaggtgaagtcactcaat
gtaggggccatcatccgaggtggcctgactcgtttcactgaccagttgggcaagctgtgg
tgttctttggcagattactacatccgcagtggccattttgagaaggctcgtgatgtgtat
gaagaagctattcagacagtgatgacagtacgggatttcactcaagtgtttgacagctac
gcccagtttgaggagagcatgattgctgctaagatggagaccacctctgaaatgggacgt
gaggaggatgatgatgtagatctggaactgcgcctggcacgctttgagcagctgatcaca
cgtcggcctctgcttctcaacagtgtcctcctgcgccagaatcctcacaacgtccatgag
tggcacaagcgggtgaagctgtatgaaggcaaaccttgggagatcatcaacacgtacacg
gaagcagtgcagactgttgacccgtttaaagccactggaaagtcacatacgttgtgggtt
tctttcgccaagttctacgagaccaatggacagatagaagatgccagaacaatttttgaa
aaggccaccaaggtgaacttcaagcaggtggatgaactggccagcgtctggtgcgagtat
ggtgagatggagctgcggcatgagaactacgatcaagccctgcgtatcctgaggaaagct
acagctattccagctaagaaagctgaatattttgattccacagagcctgtgcagaatcgt
gtatataagtccctcaaggtgtggtccatgctggctgacttggaagaaagtctcggcact
ttcaaatctactaaggctgtatatgatcgtattttggatctacgcattgccaccccacaa
atcatcattaactatggtctgttcctggaggagcacaagtattttgaagagagcttcaag
gcatatgagagaggcatctccttgtttaagtggccaaatgtttatgatatctggaacacc
tatctaaccaaattcattgaccgctatggtgggaagaagttggagcgtgctcgggatctt
tttgagcaggccttggatagctgtccccagaaatacgcaaaaactatctatctcttatat
gccaagctggaggaggaatatgggctggcccgccatgccatggcagtatacgagcgggct
actcaggctgtgctgccttcagagaagcatgatatgtacaacatctacatcaagagagca
gctgaaatttatggcgtcacccacacacgtagcatctatgagaaagcgattgaggtgcta
tcagatgaacacgctcgggagatgtgtctgcgctttgctgatatggaatgcaaattgggt
gaaatagacagagctcgggcaatctattcctattgctcacagatgtgtgaccctcgaact
acggccaccttctggcagacatggaaagaatttgagattcggcatgggaacgaagacact
atccgagaaatgctgcgcattaagcgaagtgtgcaggctacttacaatactcaggtcaac
ttcatggcttctcagatgctaaaggtttacagcaatgccacaggcacagtgtccgactta
gcaccaggacagagcggcatggatgacatgaagctcttagagcagcgagcagaacacctg
gcagccgaagcagaaagagatcagcctcgagctaaggagaagatcttgtttgtcaggagt
gatgcttcccgcagtgaattggctgaactttccaagcgggccaatcctgatgagatagac
atcaatttggatgacagcgatgagagtgaagacaatgagcctgatgaggtgcagctggaa
cagaagactgtcccctctgctgtgtttggtggacttaaagaagactga
DBGET
integrated database retrieval system
