Pseudonaja textilis (eastern brown snake): 113434156
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Entry
113434156 CDS
T09005
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113434156 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptex03041
]
113434156 (PRPF40A)
Spliceosome [BR:
ptex03041
]
Complex A
U1 snRNP components
U1 related factors
113434156 (PRPF40A)
Complex B
113434156 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
113434156
NCBI-ProteinID:
XP_026553001
Ensembl:
ENSPTXG00000006720
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MSGGDSAAAAASPQPLPFSLPKPPPLMQLNPGEGVRPVGAPGPEQSPKSARMGGRPDWPA
GKPVSLLAPLLPPRGEPEPLLPFGPASRQPLRGRLLGRGGGGGGGGNSAGSGSLLNPAMR
LGAGGGGTGGGGGGGGMGRESVMMGHPGMPHYPPMGMHPMGQRPPNMPPVSHGMMPQMMP
PMGGPQMGQMPGMMQSVMPGMMAPHMSHGPMQPTGPPGVNSMDSQISLAPPGTQPTPPVC
AVQQATPTNNSTNEEPSKQKSTWSEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLS
KCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEAMIKAEENSKSEESVPVSSSAVAP
GIPAAVASVPETPVPVPSAPVAPAMASAPETEPSAVAPVIENDAGVAPSADEVVQPAAPS
VVQEQSMEVITNSVEETPKQESSDVVPKKEEEEAQPVKKTYTWNTKEEAKQAFKELLKEK
RVPSIASWEQAMKMIINDPRYSALAKLSEKKQAFNVYKVQTEKEEKEEARLKYKEAKESF
QRFLENHEKMTSTTRYKKAEQMFGELEVWNAISERDRLEIYEDVLFFLAKKEKEQAKQLR
KRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRA
LEKEEEEEKQKGLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFT
NMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVSTPFEDFVTVISSTK
RATTLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVW
EDIRERFVKEPAFEDITLESERKRIFKDFIYLLEHECQHHHSKNKKHSKKSKKHHRKRSR
SRSGSESEDDDSHSKKKRQRSDSRSVSERSSSAESERSYKKSKKHKKKSKKRRHKSDSPE
SDVDRERDKKERENEKERSRQRSESKHKSPPKKRPNKDSHNPATNSVRLQETSEEADQIR
GNWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtggagactcggcggccgccgcggcctctcctcagccgttgcccttctcgctg
cccaagcctcctcccctgatgcagctcaaccccggcgaaggcgtgcgccctgtgggagcc
cccggaccggaacagtcgccgaaaagcgctcgcatgggaggccggccggactggcctgcc
gggaaacccgtcagtcttctagcacctctccttccgccgcgcggggaacccgaaccgctc
cttcccttcgggccggcctctcgccagcctctccgcgggagactcctcggcaggggcggc
ggcggcggtggcggcgggaacagtgcgggcagcgggagcctcctcaaccctgcgatgagg
ctgggagccggcgggggaggaaccggcggcggcggtggcggcggcggcatgggccgagag
tctgttatgatgggacatccaggcatgcctcactatccacccatgggaatgcatcctatg
ggccaaaggccgcccaacatgcctccagtatctcatgggatgatgcctcaaatgatgcct
ccaatgggaggaccacaaatgggacagatgcctggaatgatgcagtcagtgatgcctgga
atgatggcaccccatatgtctcatggccccatgcagccaacaggaccgccaggagtgaat
agcatggattcgcaaatcagtttagctccccctgggactcagcctacgcctccagtttgt
gcagtgcaacaagccactccaaccaataactctactaatgaagagccctcaaaacagaaa
tctacgtggtcagagcataagtcaccagatggaagaacatactattacaatactgagacc
aagcagtctacctgggagaagccagatgatcttaaaacccctgcagagcaattgttgtca
aaatgcccatggaaagaatacaaatctgattctggaaagccttattactacaactctcaa
acaaaggaatcacgttgggcaaaacccaaagaacttgaagatcttgaagcaatgattaaa
gcagaagaaaacagcaaatcagaagaatctgttccagtttcatcttctgcggttgcacca
gggattccagctgctgttgccagtgttcctgaaacaccagtacctgtaccatcagccccc
gttgctcctgcgatggcctcagctccagaaacagagccttctgctgtggctccagttata
gaaaatgatgctggggtagctccttcagcagacgaagtggtacagccagcggctccttct
gttgtacaagaacagagcatggaggttatcacaaactctgtggaagaaacgccaaagcaa
gaatcctcggatgttgtacccaaaaaggaagaagaggaagcccaaccagtgaaaaaaact
tatacttggaatacaaaagaagaagccaagcaagcatttaaagaactattgaaagaaaag
cgcgtgccatccattgcctcttgggaacaagctatgaaaatgatcattaatgatccaaga
tacagtgctttggcaaaattaagtgagaagaaacaagcctttaatgtttacaaagtccag
acagagaaggaagaaaaagaagaagcaagattaaaatacaaagaagcaaaagaatctttt
cagcgtttccttgaaaatcatgaaaaaatgacatcaacaaccagatacaaaaaagctgaa
caaatgtttggagagctggaagtctggaatgcaatttctgaacgtgatcgccttgaaatt
tatgaagatgttctattcttcctggcaaaaaaagaaaaggaacaagccaaacagctaagg
aagaggaactgggaggcattaaaaaacattctggacaatatggctaatgtcacctactct
accacttggtcagaggctcagcagtatctgatggacaatcctacatttgcagaagatgaa
gaacttcagaatatggataaggaggatgccttgatctgttttgaagaacacataagagca
ctggaaaaagaggaagaagaggagaaacagaaaggcctactcagagaaaggcgacgacag
cgaaaaaacagagaatcttttcagatatttttggatgaattgcatgaacatggtcagcta
cactcaatgtcatcctggatggagttatatccaactattagttctgatattaggtttact
aatatgcttggtcagcctggttcaacagcactggatcttttcaagttttatgttgaagat
ttaaaagcccgctaccatgatgaaaagaagataatcaaagatatcttaaaggataaagga
tttgtagttgaagtgagtactccttttgaagactttgtaacggtcatcagttcaactaaa
agagctactacattagatgctggaaatatcaaactggctttcaatagcctgttagaaaaa
gcagaagcccgtgaacgggagagagagaaagaagaagctcgcaaaatgaaacgaaaagag
tctgcttttaaaagcatgttgaagcaagcaacgcctcccattgaattggatgcagtctgg
gaagatattcgagaaagatttgtaaaagagccagcatttgaagacatcactttagaatcg
gagagaaaacgaatatttaaggatttcatttatttactggagcacgagtgtcagcatcat
cattcaaagaacaagaagcactctaaaaaatcaaagaagcatcatagaaagaggtctcgc
tctcgttcgggctcagaatcggaagatgacgatagccattcaaagaaaaagaggcaacgc
tcagactcgcgctcagtttctgaacggtcctccagtgcagaatctgagagaagctacaag
aagtcaaagaaacacaaaaagaaaagcaaaaagaggagacacaagtctgattctccggaa
tcggatgtggatcgagaaagagacaaaaaagagagagaaaatgaaaaagaaagaagtaga
caaagatctgaatctaagcataaatcgccacctaagaagagacctaacaaagattctcac
aatcctgcaaccaacagtgttcgattacaagaaacatcagaagaagcagatcagattcgg
ggtaattgggatacctctggtagtgaattaagtgaaggtgagcttgaaaaacaaaggagg
accctcttggaacaactggatgaagatcaataa
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integrated database retrieval system
