Pseudonaja textilis (eastern brown snake): 113434523
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Entry
113434523 CDS
T09005
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Collagen
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
113434523
NCBI-ProteinID:
XP_026553551
LinkDB
All DBs
Position
Unknown
AA seq
1274 aa
AA seq
DB search
MQVVLLGQSYFWISCLVLAGFITLQVCGQVSHFHCDTSAATDIILLVDGSWSIGRNNFGL
IREFLASLLAPFNIAEDKIRVGLSQYSSDPRTEWDLNTYSTWEQVSKAIRNLRYKGGNTF
TGLALTHVLEHNLKEEVGARPEASKLLILLTDGKSQDDASPPAQTLKNMGIKIFAVGVKN
ADETELRQVASEPLEMTVYNVVDFPLLRSLVSRLTWLLCAWIKEKNQKNIGDPMKTMSAK
SGVHLSPTNLLLKEVTSRSMHLIWNPPLITPQRYRVVYYPSRGGIPKEVALDGATSSVEL
LNLTPQTEYLVSVFPVYENAVGDGLRGISSTLPLSAPRSLRTSEISHNSIKLMWEPVEGA
TQYLILSSSTPNGAEDDTKELKVEHPEVWIRGLTPSTEYSLAVYAMYGEDASNPASIQET
TLALSPPSYLHFSNISHMSVHVNWEAVSQAVKSHRVMYSSSRGSNVGEVEVPGNASFAVL
KPLSSLTQYFVRVVSVYDEGNSFPIMGNFTTLKVPPPSQLKVTELSRSEVQLEWEASAAS
DVVLYQIKWNVLGEDAEREISVPGNLASSVLPGLKENTEYKISIRAYYKDGAQSDTISIW
HRISAKNPPTNLYVDSETPSSLRVHWTPPDAAVQHYRISYSSERSHSKQQEMMTVSGRIQ
SIVLHSLLPARVYTVTVIAVYAAGESDPVSVIGRTATVLARLPTMKESQFFKTEGCPSLR
STDGPIQGFDMMEAFGLMGKDYASIKGVAMEPYIFLGTHTYTLYRDIQLTRKTSEVLPFG
LPTEYTLTFLLRLLPESPREAFSIWQITDEDFQPLLSIILDPLKKSLVYFRRDHEADIEE
VTFDQQEVKKIFYGSFHKVHVLVSHGWVRLYVDCKKLGEKTLGKSEILSTAGFITLGKLT
RTRGPRSGSAMLQLQSLQIVCSTSWPEEDRCCEIPASRDEETCPSLLPSCSCTSDIPGLP
GPPGPPGNPGRRGIQGEQGEPGPKGEPGPPGQAGPKGLGGQQGTTGSQGLTVQGPIGPPG
LKGDKGDSGSPGIQGVMGLQGAAGKDGPQGSKGVRGLEGAAGPPGPPGPRGFQGLAGARG
NPGDKGPPGEVGPTGLPGPKGERGEKGEAQSLSTIYHLVNQACERLIQSHVLKFDTFVHE
QSRKPVPIREEEEPKAGEPGPMGQIGFPGIKGERGEIGMPGLPGRNGYPGERGVPGPKGE
KGSFGQRVEGSEGPRGQAGPPGEMMVGQQGSKGPPGSIGPSGFPGARGQPGDSGPAGRCL
PTGCHRDSRRGLIP
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttgtcctcctgggccagagttatttctggatttcttgccttgtgcttgcaggt
ttcatcactttgcaggtgtgcggtcaagtttcccatttccattgtgatacctctgctgcg
actgatattatcctgctggtggatggatcttggagtatcggacgcaacaattttggactc
attcgagaattcctggcatctttgctggcacctttcaatattgctgaagataagatcaga
gtaggtttgtcccaatacagcagtgacccacggacagaatgggatctgaatacgtattcc
acctgggaacaggtgtccaaagccattcggaatttgcgctacaaaggagggaacactttt
acaggattggcgcttacacatgtcctagagcacaacctgaaagaagaagtgggtgcgagg
cctgaagcttctaaactcctcatccttttgaccgatggcaaatctcaggatgatgccagc
ccacctgcccagactttgaagaatatgggaatcaagatattcgctgtgggggtaaaaaac
gctgatgaaacagagctgcgccaagtggcctccgaaccccttgagatgaccgtctacaat
gtggtggattttcctctgctccgttctctggtcagccggctcacatggctcttatgtgct
tggatcaaggagaagaaccagaagaatataggggatccaatgaaaaccatgtcagcgaaa
tccggagtccacttgagcccaaccaatctcctcttaaaagaagttacttccagaagtatg
cacctcatctggaacccaccactcataacaccccagagatacagagtggtctattaccca
tcgcgaggtggaattcccaaggaggttgctctggatggagccacctcgagtgtggagctt
cttaatctgacaccacagacggaatatctggtttcggtcttccctgtttatgagaatgct
gtaggtgacggtctcaggggcatcagttcaacactaccattgtctgcgcctcgatctctc
agaacatctgagatcagccacaacagtatcaagctcatgtgggaaccagttgaaggggcc
acgcaatatcttatcctgtcttcctcaacacccaacggtgccgaagatgatacaaaagag
ctgaaagttgaacacccagaagtttggatcaggggattgactcctagcaccgaatactcc
ctagcagtttatgcgatgtatggagaagatgccagcaaccctgcaagtattcaagaaact
actttggccctgagccctccaagctatttgcatttctccaacatcagccatatgtcggtc
catgtcaactgggaggcagtttcccaagccgtgaaaagtcaccgagttatgtattcctcc
agcagaggaagcaacgtaggtgaggtggaggtccctggaaacgcctcatttgctgtgctg
aagcccctctcctcactgacacaatattttgtccgtgtggtctccgtttatgacgaaggg
aactcgtttccaataatgggcaattttacgacattaaaggtgcccccaccgagccagctg
aaggtcaccgagctctccagaagtgaggtccaactggaatgggaagcatccgcagcttct
gacgtggttctttaccagatcaaatggaacgtgcttggagaagacgcagaacgggagata
tctgttcctggaaacttggcatcttccgttttgcctggtttgaaagaaaataccgaatat
aaaatatccatccgggcatactacaaggacggagcccagagtgataccatttccatttgg
cacagaatctctgccaagaacccacccaccaatctctatgtggattcggagacccccagc
agccttcgggttcactggactcctccggatgctgcagttcagcactacagaatcagctac
agttcagaacggagtcacagcaagcagcaggaaatgatgacagtctctggcaggattcag
tccattgttcttcattctctcttgcctgctagagtttatacggtgaccgtaattgcagtc
tacgctgcaggagagagtgaccctgtatctgtcattggccggacagctacagtcttggct
cgattgcccaccatgaaagaatcccaatttttcaaaacagaaggctgcccttcacttcgc
tctacggatggccccatacaaggttttgacatgatggaggcttttggattgatgggcaag
gattatgcctccatcaagggggttgctatggaaccttacatcttcttaggaactcacacc
tacactctctacagagatatccaactaacccggaaaacaagtgaggtgttaccttttgga
cttccaactgaatacacccttacttttctactccgccttctaccagaaagtccccgagag
gccttttctatctggcagataacagatgaggacttccagccgcttctcagcatcattctt
gatcctcttaagaaatccttggtgtatttccgtcgtgaccatgaagctgatatagaagaa
gtcacctttgatcaacaggaagtgaagaagatattctatggaagctttcataaggtccat
gtattggtgagccatggctgggtcaggctctatgttgactgcaagaaactaggagaaaag
acccttgggaaatcggagatcctttcaacggcaggctttatcacgcttgggaagctgaca
agaacacgaggaccacggagtggatcagccatgcttcagttgcagtcactgcaaattgtg
tgcagcacttcttggccggaggaggaccgatgttgtgagataccagcttcgagggatgaa
gaaacttgtcccagtttgcttccttcctgcagctgcacatctgatatcccaggacttcct
gggcctccaggccctccgggcaatcctgggcgaaggggtatccagggagaacagggggag
cctggccccaagggggaaccaggtcctccaggccaagctggaccaaaagggctaggagga
caacaagggaccactggttcacaaggattaaccgtgcaaggtcccattggaccgccgggt
cttaagggcgataaaggggacagcggaagtccaggaatacagggtgtgatgggtctccag
ggagcagcaggtaaagatggccctcaaggatcaaagggtgttcgaggacttgaaggagca
gctggaccaccagggcctccaggaccacggggattccaaggcttagcaggggcccggggt
aaccctggagacaaaggccccccaggagaagtcggacccacggggctgcctggtccaaaa
ggagaaaggggggagaaaggtgaagcacagtccctgtctaccatctaccatctagtaaac
caagcttgtgagcgtctgatccagtctcatgtgttaaagttcgacactttcgttcacgag
caatcgcggaaacctgtccccatccgggaggaggaggaaccgaaggctggagagcctggt
ccaatgggtcagattggtttccctggaattaaaggtgaaagaggagaaattgggatgcct
ggacttccaggaagaaacggatacccgggagaaagaggtgtccctgggcccaagggagaa
aaaggctcttttggacaaagggtggaaggttctgaaggaccaagaggtcaagcaggccct
ccaggagaaatgatggttggccaacaaggctccaaaggacctccaggtagcattggtccc
tctggatttcccggggctcgtggtcagcctggggattctggtcctgcaggtagatgtctt
cctacaggatgccacagagatagtagaagagggctgatcccatga
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