Pseudonaja textilis (eastern brown snake): 113434622
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Entry
113434622 CDS
T09005
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113434622 (COL25A1)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113434622 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
DAD
Motif
Other DBs
NCBI-GeneID:
113434622
NCBI-ProteinID:
XP_026553635
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MVGKRNPEAKGEAGCFGGQGFCSLRSAPPFNSLLAAFLLSVGSVASCVYLGMKTNDLQAR
VFAIEAAQGDVGAAAAAVAGSYRSLPSYSLDQLNSLMQEKVEQLLAQKTYEHMAKIRTVR
EASSECNCPPGPPGKRGKRGRRGETGPPGQPGPQGPPGPKGEKGDQGDQGPRGLPGFPTV
AGLHSNQILTVKGDQGQAGPPGPPGPPGPRGPPGDTGKDGPRGVPGVPGEPGKPGEQGLV
GPQGPPGQKGSFGAPGIPGTDGQQGEPGVMGERGDSGLKGDPGQRGEKGDAGETGPKGHP
GEKGDPGSSAAGIKGEPGQSGRPGQKGEPGLPGLPGLPGIKGEPGFLGPQGEPGLPGLPG
TKGERGEIGPPGKGERGEPGVPGPKGRSGESGTRGPKGSKGDPGNNGDLGAMGPRGPPGE
KGDQGATEIIDFNGNIHEALQGPPGPPGPQGLQGSKGESGSPGLPGADGEQGPKGSKGDL
GDPGIPGEKGGIGLPGLPGSNGMKGEKGDVGLPGPQGPSIVGPPGSPGPHGPPGPMGPHG
LPGPKGEPGLNGLKGLKGEPGHKGDRGPLGLPGASGLDGKPGARGIDGPAGPHGPAGPKG
DRGEKGVSGDPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDVGEKGEKVTSMLFNCCLIT
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggtggggaaaagaaaccccgaggccaaaggggaagccggctgctttggcggccaaggc
ttctgctccctcaggtctgctccgcctttcaactcgctgctggctgccttccttctctcg
gtgggatccgtcgcttcctgtgtctacctggggatgaagaccaacgaccttcaggccagg
gtctttgccattgaggcagcgcaaggggacgtgggcgctgctgctgctgctgttgctggg
tcctaccggtcgctgcccagctattctttggaccagctgaattccctgatgcaggagaaa
gtggagcaacttctagctcagaagacctatgaacatatggcaaaaatcagaacagtaaga
gaagcttcttcagaatgcaactgcccaccaggtcctcctggtaaacgaggtaagcgagga
agaagaggagagactggacctcctggtcaacctggtcctcaaggtccacctggtccaaaa
ggtgagaagggagatcaaggtgatcagggccctcggggtctgccaggcttccccacagtt
gccggccttcacagtaatcagattctcaccgtcaagggtgatcaagggcaagctggacct
cctggaccccctggacccccaggaccaagagggcctcctggagatactggcaaagatggc
ccacgaggagtgcctggggtgccgggagaacctggaaaaccaggtgaacaaggtttggtg
ggacctcaggggcctccaggacaaaagggttcatttggtgcacctggtattccaggaacg
gatggacaacagggagaacctggtgtaatgggagaaagaggagactctgggcttaagggc
gatcctggacaacggggagaaaagggtgatgctggagaaactggtccgaaaggtcaccct
ggagaaaagggtgatcctggatcttctgctgctggaattaagggagaacctggacaatcg
ggtagaccagggcaaaagggtgaacctggacttcctggacttcctgggttacctggaatt
aagggtgaaccgggtttcctcggtccccagggagaacctggattgccaggattgccaggg
acaaagggtgagagaggagaaataggacctcctgggaaaggtgaacgaggtgagcctgga
gttccagggccaaaggggaggtcaggtgaatctggaactagaggccctaaagggtcaaag
ggtgatccaggaaataatggtgatttgggagcaatgggaccaaggggtccacctggagaa
aaaggtgaccaaggtgccacagaaatcattgacttcaatggaaatatccatgaagcatta
cagggtcctccaggcccacctggaccccaaggattgcaaggatcaaagggtgaatctgga
tcaccaggattacctggtgctgatggagagcaggggcccaaaggatcaaagggtgatctg
ggtgaccctggaataccaggagaaaaaggaggtattggactaccaggtttgccaggatcc
aatggaatgaaaggagaaaaaggagatgttggattaccaggtcctcaaggtccctctatt
gtaggacctccaggttcccctggtccacatggtccaccaggaccaatgggacctcatgga
ctcccaggaccaaagggtgaaccagggttaaatggtcttaaaggattgaagggtgaacca
ggtcacaagggtgacagagggccccttggtctcccaggagcatctggcttagatggaaag
ccaggagcccggggtattgatggtcccgctggtcctcatggccctgcaggtccaaaggga
gacagaggtgaaaaaggagtttcaggagatcctgggcccagaggaccatatggtttgcct
ggcaaagatggtgaacctggccttgatggattccctggtccacgtggagaaaagggtgat
gtaggagaaaagggagaaaaggtgacctcaatgctattcaactgttgtttgattacttag
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