Pseudonaja textilis (eastern brown snake): 113434675
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Entry
113434675 CDS
T09005
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
113434675 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ptex04990
]
113434675 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
ptex04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
113434675 (SYNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
DnaI_N
Motif
Other DBs
NCBI-GeneID:
113434675
NCBI-ProteinID:
XP_026553746
LinkDB
All DBs
Position
Unknown
AA seq
1100 aa
AA seq
DB search
MGVQDYICITMTGGAPWGFRLQGGKEEKQPLQIAKIRNKSKASKAGLCEGDEVISINGKP
CAELTYSEVLLLMEGLTDTLQMLIKRFSNGANETLSSELENENLTDIKNKEYKESTTLQI
RTAMPSPHQESQIIVPTEETLPTNTKQTTVDFSEAKQEIIPCYKIPPKVIEAPKVHCTEA
SAFTGGKPGSTVELQLSFPPDRNKSSSTGSGLTVVEVQESKPLETGSVLRQEAISWLKEP
SAQWTGKIVQIVGGKEIQETHEGERKEPSLTKVEVILDCSDQATEASRFLAEKGCVESQV
EGGQSEAPPSVVSFGISSEGTEQGEDEQPSEKEPSRPHKHRARHARLRRSESLSEKQVKE
AKSKCKSIALLLTAAPNPNSKGVLMFKKRRQRARKYTLVSYGTGELERYEDEGEEDEGEE
GEKENTFEVTLFGTSESEIDEDFFSDLDKEERIVTFDWDTGLLEIEKTPKRGDEMSQLLP
ETKGKGALMFAKRRQRVDQVTAEQEAVKMQSVHRIEAHQEATSTDTIQNMSSSFYQAKQE
ESARMQKSHISKSYIEMNHSPRTIVQQNGIRVVPEINMIHPPPEAVSLPTSNRTAKPFPG
VQNRAAAPFSPPRSMVALPSDLPAPPPYTSVSPPPETLYRTVLTPMATSMSQSTLWSPTE
STEQIASRDERIAVPAIRTGILQEAKRRSTAKPMFTFKEAPKMSPNPALLSLVQNTEGKK
PATGGFESGPEEDYLSLGAEACNFMQIQAAKQKIPPPVAPKPSVKVSPTSTTPISPVWSP
PVVAVAQAPIFPVPKSPEVASPAAIKVAQPAYPPPQPPQPPQPPGTLHLESSFKGPQVSS
PHQNYTPKTTPITPLGNAVLAGGVGPAFEMPPAMSGKGAQLFAKRQSRMEKYVVDSETVQ
ANRPRPSSPTPSLPASWKYSSNVRAPPPVAYNPIQCPSYPLAAVKSQSQQPGATKTTKKK
SKKQLSSLEVMKHQPYQLNASLFTFQPPFDTKENLLPKHPSKIDSVSALKQAVPSRVLNA
GSPSNAQASSVYSVPAYSSQPFFPSSASSPVIEPYTSMGCPTFLKQEPAASPVFSVPKPK
FSAKKVGVTAQVWKPTVIEE
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgcaggattatatttgcatcactatgactggaggggcaccttggggtttcaga
cttcagggtggcaaggaagaaaagcagcctttgcagattgccaagattcgaaataagagt
aaagcatccaaggctgggttatgtgaaggagatgaagtgatatctatcaacggcaaacct
tgcgctgagttgacttattctgaagttcttcttctgatggaaggcctgactgacactctt
caaatgcttatcaaaagattctccaatggggcaaatgaaactttaagttctgaactagaa
aacgaaaacctcactgacattaaaaataaggaatataaagaaagcacaaccctacaaatc
agaacagcaatgccaagtccccaccaggaatcgcagatcatagtgccaactgaggaaaca
ctcccaacaaatacaaagcaaactactgtggatttttctgaagcaaagcaagaaataatc
ccctgctacaaaatccctcccaaagtgattgaagcccctaaagtacactgcacggaggca
tctgccttcactggaggcaagcccggctctacagttgagttacagttgtcctttccacct
gacaggaataaaagcagcagcactgggtctggtctgactgttgtggaagtccaagagagc
aagcctctggagacaggatcagtcctaagacaagaagcgattagctggctaaaagagccc
tctgcccagtggacaggcaagatagtccagattgttggtggcaaagagatccaagagact
catgaaggtgagagaaaggaaccctctctaactaaggttgaagtgattctggactgttct
gaccaggcaacagaagcatccagatttctggccgaaaaggggtgtgtagagtctcaagtg
gaaggagggcagtcagaagcacctccttctgtagtctcctttggaatctcatcagaaggc
acagagcagggggaagacgaacagccctccgagaaggaacccagcagacctcacaaacac
cgggcaaggcacgccaggctgagaaggagtgagagcctatcagagaagcaggtgaaggaa
gccaagtctaaatgtaaaagtattgctctcttactgacagcagctccaaatcccaattcc
aaaggagtgttgatgtttaagaagcgtcgccaaagggccagaaaatacactttagttagc
tacggcactggggaactagaacgttacgaagacgaaggtgaagaagacgagggtgaagaa
ggtgagaaggagaacacttttgaagtaactttatttggcacaagtgagtcagaaattgat
gaagatttcttctctgacctggataaagaagaacgcattgtgacatttgattgggatact
ggactacttgagattgaaaaaacacccaaacgtggggacgagatgtcacagctgcttcca
gagaccaagggcaaaggggcactcatgtttgccaaaagacgtcaaagggtagaccaggtc
actgctgaacaagaagcagtgaagatgcagagtgtgcatagaattgaggcacaccaagag
gccacttcaacagacaccatccaaaatatgagttcttccttttatcaagcaaaacaagaa
gaatctgccagaatgcagaaaagccacatcagcaaaagctacatagaaatgaaccatagt
cctagaacaatagttcagcaaaatggcatcagggttgtcccagagataaatatgatacat
ccccctccagaagctgttagcttacctacttcaaacagaacagccaagcctttccctggt
gttcagaacagagcagcggctcccttttcacccccaagaagcatggtggctcttccctcc
gatcttcctgccccacctccctatacttcagttagcccaccacctgaaacattatataga
actgttttgactccaatggccacaagcatgagtcagtcaacattgtggtctccaacagaa
tcaacagagcagattgcatccagggatgaacggattgctgtgcctgcaataagaactgga
atattacaggaggccaagagaagaagcactgcaaagcctatgtttacatttaaagaagcc
cccaaaatgagtccaaatcctgctcttttgtccctcgtacagaatacagaaggcaaaaaa
cctgccactggtggctttgaatctggtcctgaagaagactacctcagtttgggagcagag
gcctgcaatttcatgcaaatccaggctgccaaacaaaagatcccacccccagttgctccc
aaaccctcagtaaaggtttctccgacttccacaacacctatttcaccagtctggtcacct
ccagttgttgctgttgctcaagctcccatctttccggttccaaaatctccagaagtagca
agcccagcagccatcaaagtagcacaaccagcttatccccctccacagcctccacaacct
ccacagcctcctggtactcttcacctggaatcttcttttaagggtcctcaagtttcatca
ccccaccaaaattatacccccaaaacaacacccatcactccattaggaaatgctgtcctt
gctggtggagtggggccagcttttgagatgcctccagctatgagtggtaagggggctcag
cttttcgctaaaaggcaatcacggatggaaaagtatgtagtagactcagaaactgtgcag
gccaatcggccccggccttcatccccaactccttcattaccagcatcttggaaatattca
tctaatgttcgagcaccgcctcctgtagcttataatcccattcagtgtccatcttatcct
cttgctgctgtcaagtctcagtcacagcaacctggagctaccaaaactactaagaaaaaa
tctaagaaacaattaagctccttagaagtgatgaagcatcagccataccagcttaatgca
tctttatttactttccaacctccatttgatactaaggaaaatctccttcccaaacatcct
tcaaagatcgattcagtgtctgccttgaaacaagctgtaccatcaagggtactcaatgct
ggttctccctctaatgctcaagcttcttcagtatattctgtaccagcctacagctcacaa
ccattcttcccatcaagtgcttctagtcctgtaattgagccctatacatcaatgggctgt
cctacatttttgaagcaagaaccagcagcatctcctgtattttctgttcccaagccaaaa
ttctcagccaagaaagttggtgtcacagcacaggtgtggaaaccgacagtcattgaagag
taa
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