KEGG   Pseudonaja textilis (eastern brown snake): 113435236
Entry
113435236         CDS       T09005                                 
Symbol
LSM4
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
ptex  Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018  RNA degradation
ptex03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptex00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113435236 (LSM4)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113435236 (LSM4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptex03019]
    113435236 (LSM4)
   03041 Spliceosome [BR:ptex03041]
    113435236 (LSM4)
Messenger RNA biogenesis [BR:ptex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113435236 (LSM4)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     113435236 (LSM4)
Spliceosome [BR:ptex03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    113435236 (LSM4)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 113435236
NCBI-ProteinID: XP_026554702
Ensembl: ENSPTXG00000002136
UniProt: A0A670Y2F5
LinkDB
Position
Unknown
AA seq 139 aa
MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGMQQQKQQKGRGIGGPGRGVFGGRGRGGI
PGSGRGQQEKKPGRQAAKQ
NT seq 420 nt   +upstreamnt  +downstreamnt
atgcttccattatccttgctgaaaacggcacagaaccacccaatgctggtggaactcaaa
aatggtgaaacttacaacggccacttggttagctgtgataactggatgaacatcaatctt
cgagaagttatctgtacctcaagggatggagataaattctggaggatgcctgaatgttac
atccgtggcagcaccatcaaatacctgcgaattcctgatgagatcatagatatggtgaaa
gaagaggtggtctccaaaggcaggggccgtggtgggatgcagcaacagaagcagcagaaa
ggccgcggcattggtggccctgggcgaggagtgttcggaggtcgtggccgagggggaatc
ccagggagtggccgaggtcagcaagaaaagaagccagggagacaagcggcaaagcaatga

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