Pseudonaja textilis (eastern brown snake): 113435789
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Entry
113435789 CDS
T09005
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03030
DNA replication
ptex03410
Base excision repair
ptex03420
Nucleotide excision repair
ptex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
113435789 (RFC1)
03410 Base excision repair
113435789 (RFC1)
03420 Nucleotide excision repair
113435789 (RFC1)
03430 Mismatch repair
113435789 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptex03032
]
113435789 (RFC1)
03400 DNA repair and recombination proteins [BR:
ptex03400
]
113435789 (RFC1)
DNA replication proteins [BR:
ptex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
113435789 (RFC1)
DNA repair and recombination proteins [BR:
ptex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
113435789 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
BRCT_2
AAA_14
RuvB_N
AAA_30
Rad17
AAA_5
Zeta_toxin
AAA_17
PTCB-BRCT
AAA_16
nSTAND3
AAA_33
NPHP3_N
AAA_19
AAA_18
TIP49
RNA_helicase
AAA_7
NTPase_1
Motif
Other DBs
NCBI-GeneID:
113435789
NCBI-ProteinID:
XP_026555632
Ensembl:
ENSPTXG00000000555
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MDIRKFFEVVTPGKKPECGIVRKEKPQNKERNSGGTSTLKEIKVKNSSHEEDIKRKQVNK
KKRIIYDSDSEEEVPLIKKSKPPDRKLSSKPAKLLKTEPVVYVSETDEDEDFVKKPPPKV
KLLETSVKMIHRTTGTSQPDSKPKVKNKPLSPVKLTPISVLDYFGTGSIQQSETKLVSSK
RKESWQSKDPTINDAAIAKELQLEENSQRERQLHEDEEFAQTLAMLDETPRKKKPRKEEF
QQSKSGEAGKNKQAQKGKATASALNSQPDSAKDQIRSKSVGGLNLHPESSATKEEVDWGN
KRGSPKASSRSTPLKQQAEAIKTENGTSKGENLRRGTPAGKTISPKTKTPTKVKVSPEQP
KSVSPEDSVEKKRINYTAYRSFLNREGPKALGSKEIPQGGENCLEGMTFVITGILESIER
DEAKSLVERYGGKVTGNVSKKTNYLVKGRDCGMSKCEKGSLFLSFIFLFLCFLKAKRTKS
KVEKTSPETKADKRKPSPTKPDSDSRKKKPFLVENTEPLKPIKQEAGPVRRGLDFLEEEE
EEERKKKKQVPKAEKSSAHETDQNREVLLWVDKYKPTSLKTIIGQQGEQSCANKLLRWLK
NWQKNSFEDKQVKSSKFGSKDDGASSKAALLSGPPGVGKTTTASLVCQELGLSYVELNAS
DTRSKKSLKEVVAESLNNTSIKGFCSGVSRSVSAKHVLLMDEVDGMAGSEDRGGIQELID
LIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFPRPRVEQIKGAMMSIAFKEGLKVPPPA
MNELILAANQDIRQVLHNLSMWCARDKTLTYDGVKEDASKAKKDIKLGPFDVVRKVFANG
EETSHMSLIDKADLFFHDYSLGPLFVQENYIHVKPAAARNDLKKELILLSKTADSICDGD
LVDRQIRARQNWSLLPTQAIYSSVLPGELMRGNLQEFPSFPSWLGKFSSTGKHDRIVQEL
SMHMSLRTHASKRDVNLDYLSYLRDAVVSPLARQGSDGVQDAVAFMDSYCLLKEDVENLM
EVTSWAGKPSVFSKLDSKVKSAFTRTYNKVAHLTPYSLQLAPKSKRAGSVDMEMSEELEL
NEPETDQGSLESDAMIKKKTKPAKPPKAERKEERKKGKSKKKS
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggatatccgtaaattctttgaagttgtaactccaggaaagaaacctgaatgtggcatt
gtgagaaaggagaaaccccagaataaagagaggaattcagggggaacgtcaacgctgaaa
gaaatcaaggtgaaaaattcatctcacgaagaggatatcaagcgaaaacaggtgaacaag
aaaaaaaggataatctatgattcagattctgaagaggaggtaccattaatcaaaaaatct
aagccgccagacagaaagttatcttctaaacctgctaagctgctaaagacggagcctgtg
gtttacgtttcagaaacagatgaagatgaggactttgttaagaaaccccctccgaaagtt
aaactgctggagacgtcggtgaaaatgattcacagaacgacgggaacatcccagccagat
tccaaacccaaagtcaaaaataaacccttatctcctgtaaaactgacgcccatatccgtc
ctggattactttgggactgggagcatccaacagtcggagacaaagctggtatcaagcaaa
cgaaaagaatcttggcaaagcaaggatcccaccatcaacgatgcggctatcgctaaagaa
ctacagctggaagagaattcgcagcgggaaagacaattgcacgaagatgaagaatttgca
caaacgttggctatgttggatgagacgcccagaaagaaaaagccgcgaaaagaagaattt
caacagtcaaaatcgggcgaagcaggaaaaaacaaacaagctcagaaagggaaagctacc
gcttccgccttaaattcccaacctgattccgcaaaggatcagattcgttccaaaagtgtt
ggagggttgaatcttcaccctgaatcttctgctacgaaggaagaggtggactgggggaat
aagaggggttcacccaaggcttcctccaggtcaacgccactcaagcaacaagcagaggct
atcaaaaccgaaaatgggacctcgaagggggagaacctcaggagaggaactccagcagga
aaaaccatctcgcccaaaaccaagacgccgacaaaggtgaaggtttctcccgaacaaccc
aagtccgtcagtcccgaggactctgtggaaaagaagcggataaattacacggcctacaga
agcttcctcaatcgagaaggtccgaaggccctcggctctaaagaaataccccaaggcggt
gaaaattgcttggaaggcatgacgtttgtgattaccggaatcttggaatcgatcgaacgg
gatgaggccaagtctctggtcgagcgctacggggggaaagtcaccggaaacgtcagcaag
aagacaaactaccttgtgaaagggcgtgactgtggcatgtccaagtgtgaaaagggcagc
cttttcctgtcctttatttttttatttttatgttttttgaaggccaagagaacaaagtcc
aaggttgaaaaaacgtccccggaaacgaaagctgacaaaaggaaaccgagccctacaaag
ccggattccgactcccggaaaaaaaaacctttccttgtggaaaacacggagcctttgaaa
cccatcaaacaggaagccgggccagtaaggagagggctggacttcctggaggaggaggag
gaggaggagaggaagaagaagaagcaagttcccaaggcggaaaagagctcggctcatgaa
acggatcaaaacagagaagtgttattgtgggtggacaagtacaagcctacctctctcaaa
acgatcatcgggcaacaaggcgagcagagctgcgccaataaactcctgcgttggcttaaa
aactggcagaagaattctttcgaagacaaacaggtcaaatccagtaagtttggaagcaaa
gatgatggtgctagttccaaagcagctttgctttctgggcccccgggagtaggcaaaacc
acaacggcatcgctagtttgtcaggaactcggtttgagttacgtggagctgaacgcgagt
gacacccgcagcaagaaaagcctgaaagaggtggtggccgaatcgctgaataacaccagc
atcaaaggattctgctctggggtgtcccgttctgtcagtgcaaaacacgtccttctgatg
gatgaggtggatgggatggctggcagtgaagacagaggtgggatacaggagctaattgac
cttattaagcacacaaaaattccaataatttgcatgtgtaacgaccggaaccatcccaag
atccgttctctggtccactattgttttgaccttcgttttccaagaccgagggtggaacag
atcaagggcgctatgatgtccattgctttcaaagaagggttaaaggttccaccaccggca
atgaacgaactcattttggcagctaatcaggatatcagacaggtgttgcataatctcagc
atgtggtgtgccagagacaaaactttgacttatgacggtgtcaaagaggacgccagtaaa
gccaaaaaggatattaagctgggtccttttgatgtcgtgaggaaggttttcgccaacgga
gaagagacttctcacatgtctctcatagacaaggcagacctgttcttccacgattactct
ctgggacccctctttgtccaagaaaactacatccacgtcaagccagccgctgctagaaac
gacttgaagaaagaactcatcttacttagcaaaaccgccgacagtatttgcgatggcgat
ttagttgaccgccagattcgcgctcgacaaaactggagccttctgcccactcaggccatt
tattcgagcgtcctgcccggggagctgatgagaggcaatttgcaagaatttccaagtttt
ccgagttggctgggaaaattttcatccactggaaagcatgaccgcatcgtccaggagctt
tctatgcatatgagtctcagaacgcacgcgagtaagagagacgtcaatctggactacctg
tcctatctgcgagatgcagtggtgagtccgttggctcgccaaggctctgacggagtccag
gacgctgttgccttcatggattcttactgcttgttgaaggaagatgtcgaaaacctcatg
gaggtcaccagctgggcaggcaagcccagtgtgttttccaaattggattctaaggttaaa
tcggcgttcacgcgcacctacaataaagttgcacatcttacgccatactccctgcaactt
gcaccaaagtcgaagcgagcgggctcagtggacatggaaatgagtgaagaactggaactg
aacgaacccgagaccgatcaagggagcctggaaagcgatgcaatgattaagaaaaagacc
aaacctgccaagccaccaaaagcagaaagaaaggaagaaaggaaaaaaggaaaatcaaag
aaaaagagctaa
DBGET
integrated database retrieval system
