Pseudonaja textilis (eastern brown snake): 113435978
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Entry
113435978 CDS
T09005
Symbol
VCAM1
Name
(RefSeq) vascular cell adhesion protein 1
KO
K06527
vascular cell adhesion molecule 1
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
113435978 (VCAM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptex04515
]
113435978 (VCAM1)
04090 CD molecules [BR:
ptex04090
]
113435978 (VCAM1)
04091 Lectins [BR:
ptex04091
]
113435978 (VCAM1)
Cell adhesion molecules [BR:
ptex04515
]
Immunoglobulin superfamily
VCAM
113435978 (VCAM1)
CD molecules [BR:
ptex04090
]
Proteins
113435978 (VCAM1)
Lectins [BR:
ptex04091
]
I-type lectins (Siglecs)
113435978 (VCAM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
C2-set
V-set
NIF
V-set_CD47
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
113435978
NCBI-ProteinID:
XP_026555883
LinkDB
All DBs
Position
Unknown
AA seq
541 aa
AA seq
DB search
MRNQRRGESPNGRCIVPSRDTLLPKETRTLAGNRGRGTKAFGIEDIVPDHRVVAQIGHKL
ALSCRTTDCESPYFSWRTQLDYPLGGKLSHQGKSSVLTIQSVGFQHEHQYLCTAVCKQGE
PSKEKAVMVDIYSFPSDPVIELKSPLILGQPASVTCRVPEVYPSEQLMITLIKGKLTAEK
EFFQDPHTKSLQTKNLKVDFIPTEEDFGKEIICVAELSLEDMVLAPRQATHVMEINYGPR
NTKIVAFPGNTVLEGEALILTCLTESHPRASFVWKKQLPDGLAQNIAEKYNLSIPNPQPS
DSGTYTCEVTNEITSVVERTSLYISVQASVFSTAASTLTTPSETTVLTTPSETTALTTPP
ETTVLSTPSETTVLIETTALTTPSETTVLTTPSETTVLTTPSETTVSFTSDAASETTISV
ISRATLKTFLSTASDIATSELITMSSSDTAPKIITSMTSHAALKNNTAVHLVDASTDDRN
NTEEIIIIARVEELEYVTPVIIVVSCLSIVAGPAAAIFIYIFRKMKINGSYSLADSLKPN
I
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaccagagacgaggagaatctcccaacgggcgctgtatagttccttcgcgggac
actttgctgcccaaagaaactcggacccttgcaggaaaccgggggagaggaacgaaagcc
tttggaatagaggacattgtgccagatcacagagttgttgcacaaattggacacaagctt
gccctaagctgccgcacaaccgattgtgaatccccgtacttttcctggagaacccaatta
gactatccattaggtgggaaactgagccatcaaggaaagagttcagttttaactatacag
tctgttggatttcaacatgagcaccaatatctctgcactgctgtttgcaagcagggtgaa
ccgtccaaagaaaaagcagtcatggttgacatttactcattccccagtgatccggttatt
gagctcaaaagccctctcattcttgggcaacctgcttctgtcacctgtcgtgtccctgag
gtctatccttctgagcagttgatgatcactttgatcaaaggaaaactaactgctgaaaaa
gagttttttcaagaccctcatacaaaatcattgcagaccaagaacctgaaggtggatttc
attcctaccgaggaagattttgggaaagagattatatgtgtagctgagctgtctttagag
gacatggttctggcgcccaggcaggctacgcatgtgatggaaataaactatggcccacgg
aatactaaaatcgtggcatttccaggcaacactgtactagaaggagaagcactgatactt
acctgcttgactgaaagtcatcctcgggctagttttgtctggaagaagcagcttcctgat
ggactggcccagaatattgcagaaaagtacaacctctctatcccaaatcctcagccctct
gactctggaacctatacctgtgaagtcaccaatgaaattacaagtgtagtggagagaaca
tcgctatatatttctgtacaagcttcagtcttttcaacagccgcttcaacattaaccacc
ccatccgaaacaacagtattaaccaccccatctgaaacaacagcattaaccaccccacct
gaaacaacagtattaagtactccatctgaaacaacagtattaattgaaacaacagcatta
accaccccatctgaaacaacagtattaaccaccccatctgaaacaacagtattaaccacc
ccatccgaaacaacagtgtcttttacatcagatgcagcatcagaaactacaatatcggtt
atatctcgtgcaacactgaaaacttttttgtctacagcatcagatatagcaacatcggag
ttgattacaatgtcttcatcagatacagcacccaaaataattacctccatgacatcacat
gcagcactgaaaaacaatacagctgtgcacctggtggatgcttctactgatgacagaaat
aatacagaagagatcataataattgccagagttgaagagctggagtacgtgactcctgta
atcatcgtagtttcttgtttatccatagtagcaggtcctgcagctgccatatttatttac
atttttagaaagatgaaaataaatggatcctacagtcttgcagactcacttaaaccaaac
atataa
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