Pseudonaja textilis (eastern brown snake): 113436681
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Entry
113436681 CDS
T09005
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113436681 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113436681 (EXOSC1)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113436681 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
113436681 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
113436681
NCBI-ProteinID:
XP_026556985
Ensembl:
ENSPTXG00000018445
UniProt:
A0A670ZUR8
LinkDB
All DBs
Position
Unknown
AA seq
194 aa
AA seq
DB search
MVPPRYCVPGERLCSLEEGTPGNGTYTRHGSIFASLAGCFMKKSENGMLPVISVMRDVES
QLLPDVGATVTCKVCSINSRFAKVHILYVGSTPLKSPFRGTIRREDIRATEKDKIEVYKS
FRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSEAGLQMVPISWCEMQCPSTHGKE
LRKVARVQPQFLQT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggttcctccgcgctactgtgttcctggagagcgactatgcagtttagaggaaggaacc
cctgggaatggtacctacacgcgccatggttctatctttgcctctttggctggttgtttc
atgaagaaaagtgagaatggcatgctcccggtaatctctgtgatgagagatgtagaatcc
cagctactgcctgatgtgggagccacagtgacctgcaaggtttgcagtattaattctcgt
tttgccaaggtgcatattttgtatgttggttctacaccattaaaatccccattccgtgga
acaatacgcagagaagacatccgagctacagaaaaagacaagatagaggtttacaagagt
ttccgcccaggggatattgttttggccaaagttatctctttaggggatgcacaatcaaat
tatttgctgaccacagcagaaaatgagctgggggtagtggtggctcatagtgaagcaggt
ttacagatggtgccgatcagctggtgtgaaatgcagtgtcccagtacacatggcaaggag
ctgcgcaaagtagcccgagttcagcctcaatttctgcaaacatag
DBGET
integrated database retrieval system
