Pseudonaja textilis (eastern brown snake): 113436728
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Entry
113436728 CDS
T09005
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33
KO
K15542
polyadenylation factor subunit 2
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113436728 (WDR33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113436728 (WDR33)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113436728 (WDR33)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_Gbeta
WDR55
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
eIF2A
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_WDR11_2nd
Beta-prop_WDR41
Collagen
Ge1_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
113436728
NCBI-ProteinID:
XP_026557073
Ensembl:
ENSPTXG00000018137
UniProt:
A0A670ZTP5
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MATEIGSPPRFFHMPKFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRVWQRDQRDMRAIQPDGGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEIAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDETGEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPSPAEPLNDRKEELKLEEKKKTQAE
IEQEMAALQYTNPQLLEQLKIERLAQKQAEQSQQQPPPGGPVHGPQHFPGQGPMSQVPQG
FQQAHPPQQMPMNMPQIGPPGPQGQFRPPGPQGQMGPQGLPLHQGGGGPQGFVGPQGPPQ
GLPRPQELHGHQGMQRHPGPHGPMGPPGPPVNTGLQGHLGPQGPPGPQGHLGQQVPPAPQ
GHLGPQGPPGGQGPPGPRGIQGPHGVQGAQGMQGPVSQGPLMGLNPRGMQGPPGRETQGP
GPQGMMMGHPPQEIRGPHGLLGHGPQELRGPPPQGSMMGPPQELRGPPGTQGQQGPPQAN
MVAPQGNMQGPPGPQGQQNPSRGGHPSQGPPPFQQQKTPLLGDGPRAPFGQEGQNTGPPP
LIPGLGQHGGPGRHGPHNQGPVSSKGDSRGPPNHQVGPLSERRHDQNSGGPDHGPDRGPF
RGGQEWNDGRDTRGMPDRRAPHSDFHDDFDRTDEFREDFHPDKRFGHRLREFEGRGGPPQ
EEKWRRSGPGPPFLPDHREFNEGDRGPNRGPPGSWDGRRTSDERFSHDPEETRYRGRRDE
NFRRGTPSRHEGRGPRGRDSFPGPDDFVPEENFDSSEENARGRDHSGRGRGRGNPRGGRK
GLLPTPDEFPHFEGRMDGNREPGPRQDHSSHDGHSPANRERSSSLQGMDMASLPPRKRPW
HDGPGTSDHREMEMQAGHPEERGKGRGKSGLSQRMSKSGRSSSLDGEHHDGYHREEFGGP
PGNNPSRGGRSGSNWGRGSNMNSSQSRRGGSRGGGRGR
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggccacagagattggatccccgccacggtttttccatatgccaaagtttcagcaccag
gcccctcggcaattattctataagagaccagattttgctcagcagcaagcaatgcagcaa
cttacttttgatggaaagcgtatgagaaaagcagtgaaccgaaaaacaatagactataat
ccttctgttatcaaatatttagagaatagagtatggcaaagagaccaacgggatatgcgg
gcaattcagcctgatggaggatattataatgatctggtgccccctataggaatgttgaac
aacccaatgaatgctgtaacaacaaaatttgttaggacttctaccaataaagtaaaatgt
ccagtttttgttgttagatggacacctgaaggaagacgcttggtcactggggcttctagt
ggagaattcactttatggaatggtcttaccttcaattttgaaacaatattacaggcgcat
gacagtccagtaagggctatgacatggtcacacaatgatatgtggatgttgacagcagac
catgggggatatgtgaagtattggcagtccaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacctacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttctccgttgccatgaggagagaattctt
cgaggtcatggtgctgatgtcaaatgcgttgactggcatccaacaaaggggttggtggtt
tctggaagtaaagatagccagcagccaatcaaattctgggatccaaagactggtcaaagc
ctggctacactacatgctcataaaaacactgtgatggaggtcaagctgaatctcaatggc
aattggctgcttacagcgtctcgtgatcatctttgcaaactttttgatatcagaaatctg
aaagaagaactacaggtcttcagaggtcataaaaaggaagccacagctgtggcttggcat
cctgttcatgaaggtctttttgctagtggaggatctgatggttctttgctgttctggcat
gttggggttgaaaaggaagtgggtggtatggaaatagcccatgaaggaatgatttggagc
ttggcatggcatcctctaggacacattctgtgttcaggatcaaatgatcacaccagcaaa
ttctggacccggaatcgacctggagataaaatgcgagaccgatataacttgaacttactt
ccaggaatgtcagaagatggagtagaatatgatgacctagaacccaatagccttgcagtg
attccagggatgggaattcctgaacaattgaaactagccatggaacaagaacagatgggg
aaagatgagacaggtgaaattgaaatgactatcccaggattggactggggtatggaagag
gtaatgcaaaaggaccaaaagaaagtaccacaaaaaaaagttccctatgcaaagccaatc
cctgcccagtttcaacaggcttggatgcagaataaagttccaatcccttcaccagctgag
cctctgaatgatcgaaaggaagaacttaaattagaggagaaaaagaagacacaagcagag
atagagcaagaaatggcagcgcttcagtacactaatccacagcttcttgagcaattgaag
attgagagacttgcacagaaacaagcagaacagagtcaacagcaacctcctccaggagga
cctgttcatggaccccagcattttccaggacaaggtccaatgtctcaggtgccgcaagga
tttcagcaagcccatccacctcagcagatgccaatgaatatgcctcagattggaccacca
ggaccacagggacagttcaggcctccaggacctcaaggacaaatgggacctcaaggtctt
cctttacaccaaggaggtggtggaccacaagggttcgttggtcctcaaggacctccacaa
ggacttccaagacctcaagaacttcatggacatcaaggaatgcagaggcatcctggtcct
catgggcccatgggcccaccaggtccaccagttaatactggacttcagggtcacttaggc
ccacaaggaccacctgggcctcaaggtcacttaggtcaacaagttccacctgcaccacaa
ggccatttaggtcctcaggggccacctggtggtcaggggccacctggcccaagggggata
caagggccccatggagtacagggagctcaagggatgcagggtcctgtatcccaaggacct
ttgatgggacttaatccaagaggcatgcaaggacctccaggacgagagacccagggtcct
ggtccccaaggaatgatgatgggtcatccaccacaagaaattagaggacctcatggtttg
ttggggcatggcccccaagagctcagaggtcctccacctcagggttcaatgatgggacct
ccacaggaattgcgtgggccaccaggtacacaaggacaacaaggacctccacaagctaat
atggtagcacctcaaggaaatatgcaagggccacctgggcctcaaggacaacagaatcct
tcaagggggggccatccttcccagggtcctccacctttccagcagcagaaaactccttta
cttggtgatggtcctcgagccccatttggtcaggaagggcagaatactggacctccacca
ttgataccaggattgggacagcatggaggaccaggtcgtcatggccctcacaaccaagga
cctgtttctagtaaaggtgattcgcgtggtccaccaaaccatcaagttggcccactctca
gaaaggagacatgaccagaatagtggtggcccagatcatggtcctgatagaggtcccttc
cgaggtggtcaagaatggaatgatggtagagacactaggggtatgccagacagaagggca
cctcattcagatttccatgatgactttgatcgaacagatgaatttcgtgaagactttcat
ccagacaagcgatttgggcatcgtttacgtgaatttgagggaagaggaggtccacctcaa
gaagagaaatggagaagaagtggtccaggccctcctttccttcctgatcacagggaattc
aatgaaggagataggggtccaaaccgtggacctcctggctcatgggatggacggagaact
tcagatgagcgattctctcatgatccagaggaaacacgatatcgaggaagaagagatgaa
aactttaggagaggtacaccctcaaggcatgaaggccgaggaccaagaggaagagacagt
tttcctggaccggatgattttgtgccagaagaaaattttgactcatcagaggaaaatgca
aggggaagagatcacagtggtcggggaagaggtcggggtaacccaagaggaggacgaaaa
ggtcttcttcccactccagatgaatttcctcattttgaaggccgaatggatggaaaccga
gaaccaggtccccgtcaagatcattcttctcatgatggacattctcctgcaaatcgagaa
cgttcctcctccctgcaaggaatggatatggcctcactaccaccccgcaaacgaccctgg
catgatggaccaggaacctctgatcacagagaaatggaaatgcaagctgggcatccagag
gagagaggaaagggacgtggaaaatcaggcctttcacagagaatgtcaaagtctggaaga
tccagttctttggatggagagcatcatgatggatatcatagagaagaatttggaggacct
ccaggaaacaatccttctagaggaggaagaagtgggagtaactggggaagaggaagtaac
atgaactcaagccagtcaaggcgaggaggttctagaggtggaggaaggggtcgatag
DBGET
integrated database retrieval system
