Pseudonaja textilis (eastern brown snake): 113436916
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Entry
113436916 CDS
T09005
Symbol
DHX36
Name
(RefSeq) ATP-dependent RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113436916 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptex03019
]
113436916 (DHX36)
03012 Translation factors [BR:
ptex03012
]
113436916 (DHX36)
Enzymes [BR:
ptex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113436916 (DHX36)
Messenger RNA biogenesis [BR:
ptex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113436916 (DHX36)
Translation factors [BR:
ptex03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
113436916 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
Ntox8
AAA_14
RsgA_GTPase
AAA_23
NPHP3_N
PhoH
Sir1
Motif
Other DBs
NCBI-GeneID:
113436916
NCBI-ProteinID:
XP_026557436
Ensembl:
ENSPTXG00000004950
UniProt:
A0A670Y6V3
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MSYENRRGWGRRDGPRASQSSSSSSRGGEGGGGGSGSRSRPPPHLKGREIGLWYARRQGE
RSKEAERQQRSVVHMDERREEQIVQLLNTVQNKNEKEQEAMSWWSDEEGCTKEVPTKTKP
VVENPVVEKAPEKRRPVLEKSFLVQDSDYLLQENMPDSDLDEQYKEELRKKKSDSRYIEM
QRFREKLPSHSMRKELVNLINNSRVTVISGETGCGKTTQVTQFILDDYIERGKGSSCRIV
CTQPRRISAISVAERVAAERAESCGNGKSTGYQIRLESRLPRRQGSILYCTTGIVLQWLQ
SDKQLSSVSHVILDEVHERNLQSDVLMAIIKDLLNVRLDLKIILMSATLNAEKFSDYFDS
CPMIHIPGLAYPVKEYLLEDVIEKLRYMPENTDRRPHWKKRFMQGHISRPEKEEKEEIYH
EQWPDYVKQLRTRYSEATIDALEMIDDDKIDLDLIAALIRYIALEEEEGAILVFLPGWDN
ISTLHDLLVSQVMFKSDRFVIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITI
DDVVYVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRA
SLLDDYQLPEILRTPLEELCLQIKILKLGGIANFLMKLMDPPSRDAVLLSIKHLKELNAL
DRQEQLTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAGLSFKDPFVIPLGKEKL
ADARRKELSRNSKSDHLTVVNAFKGWEEAQRRGFRYEKDYCWEYFLSSNTLQMLRNMKGQ
FAEHLLAAGFVNSRNPRDPKSNINSENEKLLKAVICAGLYPKVAKIRANFSKKRKMVKVS
TKTDGTVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQ
KDKDQDTIAVDEWIVFQSPARIAQLVKDLKKELDDLLQEKIENPQPVDWNDTKSRDTAVL
TAIIDLITTQENETARNFAPHFQNEQYN
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagctatgagaaccgccggggttggggccgcagggacgggccccgcgcttcgcagtcg
tcgtcctcttcttccagaggtggcgaagggggcggcggcggtagcggcagccgcagccga
cctcctccccacctgaagggccgtgagattggcctgtggtacgcacggagacaaggcgag
aggagcaaagaggccgagagacagcagagatctgtggtacatatggatgagcgcagagaa
gaacagattgtacagctgctgaatactgtccagaacaaaaatgaaaaagagcaagaagct
atgtcttggtggtcagatgaagaagggtgtacaaaggaggttcctactaaaacaaaacct
gtggtggaaaatcctgttgtggagaaggctcctgaaaagagaaggccagtactggaaaaa
tcatttctggttcaagattcagattatctcttacaagaaaatatgcctgatagtgactta
gatgaacaatataaagaagaactgagaaagaaaaaatctgattcaagatacattgagatg
cagagatttcgtgagaaattgccttcccacagtatgaggaaggagctcgtcaaccttata
aataatagccgggtaactgtaataagtggtgagactggttgtggaaagacaacccaggta
acccagttcattttggatgactatattgaaagaggaaaaggatcttcttgcaggattgtg
tgcactcagcctaggagaatcagtgctatttctgtagcagaaagagttgcagcagaaagg
gctgaaagctgtggtaatggaaaaagcacaggatatcaaattcgtcttgaaagccggttg
ccaaggagacaaggttcaattttatactgcacaacaggaattgtcctgcagtggctccag
tcagacaaacaattgtccagtgtaagtcatgtaatccttgatgaagtccatgagagaaat
cttcaatcagatgttttaatggcaataattaaagacctcctgaatgtacgactagatttg
aaaataattctgatgagtgctacactgaatgctgagaagttttcagattattttgacagt
tgtcctatgatccatattcctggcttggcttatccggtcaaggaataccttttggaagat
gtaattgagaaattaaggtacatgccagaaaatacagatcgcaggccacattggaaaaag
agatttatgcagggacatataagcagaccagaaaaggaagaaaaagaagaaatttatcat
gaacaatggccagattatgtaaagcaactaagaacacgatattcagaagctacaattgat
gcactggaaatgatagatgatgataaaattgatcttgatttgatagcagcattaataaga
tatattgctcttgaagaagaggaaggcgcaattctggtatttcttcctggatgggataac
attagcacactgcatgatcttctggtttctcaagttatgtttaaatcagataggtttgtc
atcatacctttgcattcattaatgcctactgttaaccaaactcaggtgttcaaaaagacc
cctcctggagttcgtaaaattgtaattgctacaaacattgctgagactagtatcaccata
gatgatgtagtttatgttatagatggaggaaagataaaagaaactcattttgacacgcag
aacaatatcagcacaatggctgcagaatgggttagcaaagcaaatgccaagcaaagaaaa
gggagagcaggaagagtccaacccggccactgctaccacttgtataatggtcttcgtgcc
agtctgctagatgattatcagttgcctgaaatcctgaggacacctttggaggaactgtgt
ttgcaaatcaagattttgaaacttggaggtattgcaaacttcttgatgaagctcatggat
ccaccatcacgtgatgctgtgttgctgtccataaagcatctaaaggagttgaatgcattg
gacagacaagaacagttgactccacttggtgtccacttggcacgattacctgtggagcca
cacattggaaaaatgattctgtttggagccttattctgttgcttagatcctgttctcact
attgcagctggcctcagcttcaaggacccctttgtcattcccttgggtaaagaaaaattg
gcggatgcaagaagaaaggaactctcaagaaattctaaaagtgatcacctgactgttgtg
aatgctttcaagggttgggaagaagctcagcggcgtggcttcaggtacgagaaggattat
tgctgggagtattttctttcttcaaataccctgcagatgctgcgaaacatgaaagggcaa
tttgcagaacatctccttgcagctgggtttgtgaatagtaggaaccccagggatcccaaa
tccaacattaattcagaaaatgagaagttactcaaagctgttatctgtgctggactatat
ccaaaggtggcaaaaatccgagcaaacttcagcaaaaagagaaaaatggttaaagtttcc
accaaaacagatggaacagtgaacattcaccccaaatctgtgaatgttgaagagacagaa
ttccattacaactggctagtgtaccacttgaaaatgaggacaagtagcatatacctgtat
gactgtacggaagtttcgccatattgtctcttgttttttggaggagacatttcaattcaa
aaggacaaagatcaggatacaattgctgtagatgaatggattgtttttcagtctccagca
agaatagcacagctggtaaaggatttgaaaaaagaattggatgaccttctgcaagagaaa
atagaaaatccgcaacctgtggactggaacgatactaaatcaagggacactgcagtgttg
acagctattatagacttaatcactacacaagagaatgaaactgccagaaactttgcgcct
catttccaaaatgaacaatacaattaa
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