Pseudonaja textilis (eastern brown snake): 113437879
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Entry
113437879 CDS
T09005
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain
KO
K06237
collagen type IV alpha
Organism
ptex
Pseudonaja textilis (eastern brown snake)
Pathway
ptex04510
Focal adhesion
ptex04512
ECM-receptor interaction
ptex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113437879 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113437879 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
113437879 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptex04147
]
113437879 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
ptex00536
]
113437879 (COL4A5)
Exosome [BR:
ptex04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113437879 (COL4A5)
Glycosaminoglycan binding proteins [BR:
ptex00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113437879 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113437879
NCBI-ProteinID:
XP_026558860
LinkDB
All DBs
Position
Unknown
AA seq
1541 aa
AA seq
DB search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NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgaacgtggagatattatcacctctcccctccctggacagaaaggtgaccca
ggatttccaggtccacccggaattccaggttctgcaggtctccctggtgtagaaggacca
gttggtcctcccggacccccaggtttgacgggtcctcctggtcccccaggactgccgggt
tctaagggcaatatgggcttgaatttccaaggacccaaaggagaaaaaggtgaacaggga
cttcaaggacctccagggccaccaggacagatcggcgaacagacgagaatcaatgatgta
gaatttcaaaaaggagatcagggtgctccaggtgacccgggccccccaggatccccgggg
ttccccgggcctcctgggcctcctggcggtggaaaaggtgaaaaaggtgagcaaggagaa
ccaggcaaaagagggaagccaggaaaagatggggacactggattgccaggtttgtctggt
tttcctggtgaacctggcatgcctggcatcccgggaagagatggagacaagggtcaaaaa
ggagaaaccggtttacctggcccacctgggcaagtgattccgaggccgggcaccggtata
acagtgggaccaaagggtagcaaaggattagcaggatatcccggagacaaaggagatcgt
ggttatcctggccctgtgggcccccctggcttaccaggcaccccaggacttccaagcgta
ggtcctccaggtccacctggattacctggagaaagaggacagaaaggggatcagggcctt
cctgggattgctataccagggcagccagggattgatggacaaccaggactcccaggacaa
ccaggtcccccaggaccaccaggatcaaccatcccacctgttgatcggctttgtgagcga
ggacctcctggccctcaaggaattgctggagaacaaggatttccaggggaaagaggccag
aaaggtgacaagggagacacctgttttaactgcataggaagcggcatcccaggcccccca
ggggaaaaaggctttcctgggctccctggcgatccaggggctccaggtcttcctgggccg
aaaggtgacaaaggcatttctggtgtatttggagctattgggcctcaaggtcctcctgga
cttccaggtcctcctggacgtcctggcactaaaggtgatccaggtgaagtgattggtttc
cctcggatgaaaggtgaaaagggtaatccaggtttcccgggtcctccagggctgcccggt
ttagatgcttctcctggcaaagatggactcccgggtcgtcctggacccaagggcgagcca
ggtagcattgctttcaaaggagaccgagggcttactggagcgccaggtcttcctggatct
gttggagagcgagggcctccagggcctcctggatttggaccacaaggacctccaggagaa
aaggggcttcagggcgtccctggccgcccaggttcaccaggtgctccagggcccaaaggc
gaacctgcccaatctgttcccgaaaaaggacctccagggcttccaggacccccaggcaga
aatggggaagatggttttccaggagaacctggtcagcctggaccacctgggttgacagga
atccccgggcaaaaaggtgaacccggtttccctggcattggactcccaggcccaccaggg
cccaaaggtttgcctggtttatcaggtgaacctggacttccaggaaaccctggaagaccg
ggagctgatggagcccctggagtgcctggagacaaaggacagaagggagagcgaggacat
ggcattccaggacccaaagggccagctggcccaccgggtttcaaaggagcacaaggtgcc
aaaggtgtgcctggcttcccaggaaaccccggctccccaggacgggcaggatttgatggc
tctcctggagctaaaggtgatccaggaccacgtggccagcctgggctggttggacctcca
gggattccaggaactggtgtccaaggaccacctggtccacctggtcctccaggaccagca
ggatcaccaggccaaccaggatttcaaggcatccctggagagaaaggagatcctgggcaa
ccaggatttgatgttcccggccctccaggtgataggggcaacccaggttttcctggacca
cctgggcttccaggtggaccaggttcccctggttctccaggacaagatggaactccaggc
acaccaggaggcaaaggcgatatgggagtgatgggggcacctggtcctccgggaacacct
ggatctcctggcagaaatgggttccctgggtccaaaggcaatgatggtttaccaggacaa
ccaggtcaaccaggacttgctggacagaaaggcagcaaaggagaacctggcttgccggga
gctcccggaaaaattgatattgaccaactgggctccaaaggagaaaagggggaacctgga
gagaagggtaatcctggtttgactggtcagaagggttatccaggcctcccaggtgaccca
gggcccgctggatcagttggacagccaggtgcacctggattgccaggttccaaaggagat
actggaattccgggtgggcctggaccaactgggcccccaggattaaaaggtgccagtggc
gagatgggactcccaggtccccctggcataaaaggttcacaaggcgtcccagggcgcctt
ggccagcctggctctcctggatcgccaggactgaaaggagacaagggtgatcctggtatt
tccggcattggtattccgggtccccctggccccaagggtgaaagtggactgcctggctat
cctggccctccaggccctaaaggatcttttggaaatccggggttgcctggctcgcccggt
attccaggagcaaaaggtgaacctggccttcctggattccaagggacaccaggcattcca
gggacaaaaggtcttgatggacctccaggaagcccaggtgttccagggccacctggacct
ccaggtgaacttggtcgtcctggccctccaggccttctgggggaaaaaggacaacctggg
cgagatggcatccctggaccatcaggacagaaaggtgaaccaggtcaaccaggatttgga
cttcccggacctcaaggcctcccaggactcgcaggtcaaaagggagattctggcttctct
ggacccccagggcctccaggaccccctggtttaaaaggagaaatgggtaccaagggattt
cctggccctccgggcttagaaggtcctccaggacttcctggaccaccatcagaaggacct
aagggtagccctgggccatcaggcataccgggacggccaggtgccacaggtcctccaggt
cttcctgggcctgaaggaccccgtggaccacccgggattgggggagtgaaaggagaaaaa
ggaaaccccggccagacaggtcagcccggacttcctggactaaagggagaccagggagca
cctggacagatgggtgaacctggacatccaggcctgaacgggatgaagggagactcaggt
gttccaggagcaccaggatttccaggtatgaagggacctcctggacctttgggaccttct
ggccctggaggagaccctggaccccctggctccccaggtgctccagggatacctggttca
gctggacaaacaattgtggttaaaggtgatcaagggccacctggtcctccagggcagcct
ggaatgaaaggtctgcctggactcccagggcctccaggtttgccaggttcaattggccct
cctggtgacattggacgggatggtcttcctggttttgatggtccagccggacgtaaaggg
gagaggggactctcaggccagccaggtcttcgtggttcacaaggacctcctggccctgat
ggattgcaaggtcccccgggactccctggaacaggttcagttgcccatggattccttata
actcgtcacagccaaaccaccgatgcccccttctgcccaccaggaaccagccagatctat
gatggattttcccttctctatgtgcaaggaaatgagagagctcatgggcaggatctgggc
actgctggcagctgtctccgccgtttcagcaccatgcccttcatgttttgcaacatcaac
aacgtctgtaactttgcatctaggaacgattactcttattggctttccacacctgagccg
atgccaatgagcatggagccactaactggaaagaatatacaaccttttattagccgttgc
acagtctgtgaagctcccgcgatggtcatagcagtccacagccagaccatccagatccca
tcgtgtccacagggctggaactcgctctggatcggatattcgttcatgatgcacaccagt
gctggggcagaaggatctggacaggccttggcttctcctggctcgtgtcttgaggaattc
cgctcagctcccttcattgagtgccacggccgagggacctgcaactattatgccaattca
tatagtttttggctggcaactgtggaaatagcagaaatgtttaataaacctcagtcggag
actcttaaagctggtgaccttcgggcccgtattagccgatgccaagtttgcatgaagagg
acgtaa
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integrated database retrieval system
